Factsheet for VIT_11s0016g03930.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

cytosol 2
peroxisome 1
mitochondrion 2
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0008g03920.t01	Wine grape	cytosol	70.85	72.05
KRH60285	Soybean	cytosol	70.38	71.74
KRH41577	Soybean	cytosol, nucleus, peroxisome	69.91	70.57
KRH39284	Soybean	peroxisome	72.04	70.53
KRH48393	Soybean	peroxisome	71.33	70.49
AT4G13260.1	Thale cress	cytosol	65.64	66.75
VIT_04s0023g01480.t01	Wine grape	plasma membrane	57.35	61.27
VIT_04s0008g04870.t01	Wine grape	cytosol	46.68	53.1
VIT_05s0051g00060.t01	Wine grape	peroxisome, plastid	54.98	52.97
VIT_07s0005g04800.t01	Wine grape	cytosol	52.84	52.59
VIT_18s0001g15100.t01	Wine grape	cytosol, peroxisome, plasma membrane	42.42	47.23
VIT_18s0001g15190.t01	Wine grape	cytosol	40.52	45.12
VIT_07s0104g01260.t01	Wine grape	plasma membrane	39.81	43.19
VIT_07s0104g01250.t01	Wine grape	extracellular	37.2	41.53

Protein Annotations

EntrezGene:100256048	wikigene:100256048	MapMan:11.2.1.1.2	Gene3D:3.50.50.60	EMBL:AM426148	ProteinID:CAN60211
ProteinID:CAN60211.1	ProteinID:CCB51516	ProteinID:CCB51516.1	UniProt:F6HH20	InterPro:FAD/NAD-bd_sf	EMBL:FN595756
InterPro:Flavin_mOase	InterPro:Flavin_mOase-like	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497
GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0050660
GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	EntrezGene:LOC100256048	wikigene:LOC100256048	PFAM:PF00743
PIRSF:PIRSF000332	PRINTS:PR00368	PRINTS:PR00469	PANTHER:PTHR43539	PANTHER:PTHR43539:SF13	InterPro:Pyridine_nuc-diS_OxRdtase_2
SUPFAM:SSF51905	UniParc:UPI00015C842C	ArrayExpress:VIT_11s0016g03930	EnsemblPlantsGene:VIT_11s0016g03930	EnsemblPlants:VIT_11s0016g03930.t01	RefSeq:XP_002281015
RefSeq:XP_002281015.1	:	:	:	:	:

Description

Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:F6HH20]

Coordinates

chr11:-:3213014..3215223

Molecular Weight (calculated)

47550.8 Da

IEP (calculated)

9.336

GRAVY (calculated)

-0.236

Length

422 amino acids

Sequence
(BLAST)

001: MDYLKEVEGK RVHDPLGRKM SKSERRILVP GPVIVGAGPS GLAVAACLKE RGISSLILER ENCIASLWNL KTYDRLHLHL PKEHCELPLM PFPPDFPRYP
101: TKHQFLNYLE AYAKRFDIRP FFNKTVVSAE FDPRSRLWQV KTRGFKKEEE IVYQCQWLIV ATGENAEEVV PEIQGMNEFA GPIIHTSSYK SGDSYRGKRV
201: LVVGCGNSGM EVCLDLCNHN AFPSLAVRDS VHVLPQEMLG RSTFGLSMWL VKWFPVRLVD QFLLLVSRMM LGDTARLGLN RPKLGPLQLK SLSGKTPVLD
301: VGTLAKIKTG NIKVCRGIKQ LSCHTAEFVD GRVENFDAII LATGYKSNVT SWLKEGNMFS EKDGLPRKPF PNGWKGECGL YAVGFTKRGL LGASLDARRI
401: AEELSVHSSW PFQHFRHDNH DL

Best Arabidopsis Sequence Match ( AT4G13260.1 )
(BLAST)

001: MEFVTETLGK RIHDPYVEET RCLMIPGPII VGSGPSGLAT AACLKSRDIP SLILERSTCI ASLWQHKTYD RLRLHLPKDF CELPLMPFPS SYPTYPTKQQ
101: FVQYLESYAE HFDLKPVFNQ TVEEAKFDRR CGLWRVRTTG GKKDETMEYV SRWLVVATGE NAEEVMPEID GIPDFGGPIL HTSSYKSGEI FSEKKILVVG
201: CGNSGMEVCL DLCNFNALPS LVVRDSVHVL PQEMLGISTF GISTSLLKWF PVHVVDRFLL RMSRLVLGDT DRLGLVRPKL GPLERKIKCG KTPVLDVGTL
301: AKIRSGHIKV YPELKRVMHY SAEFVDGRVD NFDAIILATG YKSNVPMWLK GVNMFSEKDG FPHKPFPNGW KGESGLYAVG FTKLGLLGAA IDAKKIAEDI
401: EVQRHFLPLA RPQHC

Arabidopsis Description

YUC2Indole-3-pyruvate monooxygenase YUCCA2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVQ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.