CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

cytosol 2
peroxisome 1
mitochondrion 2
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60285	Soybean	cytosol	92.58	93.48
KRH48393	Soybean	peroxisome	81.82	80.09
KRH39284	Soybean	peroxisome	82.06	79.58
VIT_11s0016g03930.t01	Wine grape	cytosol, nucleus, peroxisome	70.57	69.91
KRH16221	Soybean	cytosol, nucleus, peroxisome	68.42	65.6
KRH04824	Soybean	cytosol, nucleus, peroxisome	68.18	65.07
KRH62005	Soybean	cytosol, nucleus, peroxisome, plastid	67.94	64.99
AT4G13260.1	Thale cress	cytosol	63.88	64.34
KRH52661	Soybean	cytosol, nucleus, peroxisome, plastid	66.99	63.64
KRH05083	Soybean	cytosol	53.59	55.17
KRH61831	Soybean	cytosol	53.35	55.06
KRH16035	Soybean	cytosol	51.44	54.99
KRH52507	Soybean	cytosol	52.39	54.48
KRH19661	Soybean	cytosol, endoplasmic reticulum, peroxisome	54.31	53.66
KRH32274	Soybean	cytosol	54.07	53.43
KRG95789	Soybean	cytosol, peroxisome, plastid	54.07	53.3
KRH67507	Soybean	cytosol, peroxisome, plastid	54.07	53.3
KRG90286	Soybean	cytosol, peroxisome, plastid	55.5	52.85
KRH33524	Soybean	cytosol, peroxisome, plastid	55.74	52.83
KRH53357	Soybean	extracellular	46.17	48.25
KRH68103	Soybean	cytosol	41.15	44.79
KRH64572	Soybean	cytosol, endoplasmic reticulum, peroxisome	45.69	44.01
KRG96368	Soybean	cytosol	40.43	43.33
KRH64052	Soybean	vacuole	39.23	43.04
KRH53890	Soybean	cytoskeleton, cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	38.04	41.73

Protein Annotations

EntrezGene:100811555	MapMan:11.2.1.1.2	Gene3D:3.50.50.60	EMBL:ACUP02004772	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase
InterPro:Flavin_mOase-like	EnsemblPlantsGene:GLYMA_08G038600	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497
GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0050660
GO:GO:0050661	GO:GO:0055114	UniProt:I1KQ20	InterPro:IPR036188	EnsemblPlants:KRH41577	ProteinID:KRH41577
ProteinID:KRH41577.1	PFAM:PF00743	PIRSF:PIRSF000332	PRINTS:PR00368	PRINTS:PR00469	PANTHER:PTHR43539
PANTHER:PTHR43539:SF13	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905	UniParc:UPI000294C650	:	:

Description

hypothetical protein

Coordinates

chr8:-:3028589..3031070

Molecular Weight (calculated)

46293.8 Da

IEP (calculated)

9.003

GRAVY (calculated)

-0.115

Length

418 amino acids

Sequence
(BLAST)

001: MLNMEYLKEV EGKSVHDYVE VKMGKMTKPI SVAGPVIVGA GPSGLAAAAC LKQKGIPSLI LERADCLASM WQLKTYDRLC LHLPKQFCQL PLMPFPQNFP
101: SYPTKQQFLA YLKAYADHFD IKPALSKTVI SANFDHGCGY WRVKTQGLKK EETEYVCQWL IVATGENAEE VVPQIEGMSE FEGPILHTSS YKSGSMFGGK
201: NVLVVGCGNS GMEVCLDLCN HDARPSLVVR DTVHILPQQM FGKSTFGLSM SLLKWFPMRL VDKFLLLMSH LILGDTAQFG LNRPKIGPLE LKNLCGKTPV
301: LDVGTLAHIK SGKIKVCRGI KQLAKHKVEF VDGKTENFDV IIMATGYKSN VPTWLKGSNM FCEKDGLPRK DFPNGWKGEN GLYAVGFSKR GLLGASIHSK
401: RTAEDIEHCW KAANTTRV

Best Arabidopsis Sequence Match ( AT4G13260.1 )
(BLAST)

001: MEFVTETLGK RIHDPYVEET RCLMIPGPII VGSGPSGLAT AACLKSRDIP SLILERSTCI ASLWQHKTYD RLRLHLPKDF CELPLMPFPS SYPTYPTKQQ
101: FVQYLESYAE HFDLKPVFNQ TVEEAKFDRR CGLWRVRTTG GKKDETMEYV SRWLVVATGE NAEEVMPEID GIPDFGGPIL HTSSYKSGEI FSEKKILVVG
201: CGNSGMEVCL DLCNFNALPS LVVRDSVHVL PQEMLGISTF GISTSLLKWF PVHVVDRFLL RMSRLVLGDT DRLGLVRPKL GPLERKIKCG KTPVLDVGTL
301: AKIRSGHIKV YPELKRVMHY SAEFVDGRVD NFDAIILATG YKSNVPMWLK GVNMFSEKDG FPHKPFPNGW KGESGLYAVG FTKLGLLGAA IDAKKIAEDI
401: EVQRHFLPLA RPQHC

Arabidopsis Description

YUC2Indole-3-pyruvate monooxygenase YUCCA2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVQ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.