CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
peroxisome 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG90286	Soybean	cytosol, peroxisome, plastid	94.1	94.53
Bra032499.1-P	Field mustard	cytosol	74.83	78.2
Bra015334.1-P	Field mustard	plastid	75.74	76.61
CDX89807	Canola	plastid	75.74	76.61
CDY61147	Canola	plastid	75.51	76.38
AT1G04610.1	Thale cress	cytosol	75.28	75.97
CDY53200	Canola	golgi, peroxisome, plastid	73.7	75.58
AT2G33230.1	Thale cress	plastid	73.7	75.41
CDY17153	Canola	peroxisome	73.47	74.31
Bra005513.1-P	Field mustard	cytosol, peroxisome, plastid	73.24	74.08
CDY19472	Canola	cytosol, peroxisome, plastid	73.02	73.85
PGSC0003DMT400030255	Potato	cytosol	69.84	73.51
KRH67507	Soybean	cytosol, peroxisome, plastid	70.07	72.88
KRG95789	Soybean	cytosol, peroxisome, plastid	70.07	72.88
GSMUA_Achr11P...	Banana	cytosol	57.37	72.49
GSMUA_Achr8P12830_001	Banana	cytosol, golgi, peroxisome	59.64	72.45
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	55.33	72.19
KRH32274	Soybean	cytosol	68.71	71.63
GSMUA_Achr5P20550_001	Banana	cytosol, peroxisome, plastid	61.68	71.58
Solyc09g091090.1.1	Tomato	peroxisome	69.84	71.46
KRH19661	Soybean	cytosol, endoplasmic reticulum, peroxisome	68.48	71.39
GSMUA_Achr1P03360_001	Banana	peroxisome	54.88	70.35
VIT_05s0051g00060.t01	Wine grape	peroxisome, plastid	68.71	69.18
GSMUA_AchrUn_...	Banana	mitochondrion	61.0	68.27
GSMUA_Achr4P25050_001	Banana	cytosol	58.5	68.25
GSMUA_Achr1P24210_001	Banana	cytosol	58.28	67.81
GSMUA_Achr2P04250_001	Banana	cytosol	57.6	67.02
Os04t0128900-01	Rice	peroxisome	62.36	65.63
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	55.56	64.99
TraesCS2A01G011500.1	Wheat	plastid	60.77	64.11
TraesCS2D01G012100.1	Wheat	cytosol, peroxisome, plastid	60.77	63.66
EES11777	Sorghum	cytosol, peroxisome, plastid	60.77	63.51
TraesCS2B01G010100.2	Wheat	cytosol, peroxisome, plastid	60.54	63.42
Zm00001d004467_P001	Maize	peroxisome, plasma membrane, plastid	60.32	63.18
Os07t0437000-01	Rice	mitochondrion	55.78	61.81
Zm00001d005439_P001	Maize	plastid	54.88	60.8
TraesCS2B01G562800.1	Wheat	mitochondrion	57.14	60.58
TraesCS2A01G533200.1	Wheat	mitochondrion	56.92	60.34
TraesCS2D01G535100.1	Wheat	mitochondrion	56.69	60.1
HORVU5Hr1G050630.3	Barley	mitochondrion, plasma membrane	46.26	58.96
KRH16035	Soybean	cytosol	51.7	58.31
KXG35000	Sorghum	plastid	55.78	57.88
KRH05083	Soybean	cytosol	53.29	57.88
TraesCS4A01G313200.1	Wheat	mitochondrion	53.51	57.56
KRH16221	Soybean	cytosol, nucleus, peroxisome	56.69	57.34
KRH60285	Soybean	cytosol	53.29	56.76
HORVU5Hr1G125560.2	Barley	mitochondrion	53.29	56.76
HORVU2Hr1G001820.1	Barley	plastid	60.54	56.69
KRH04824	Soybean	cytosol, nucleus, peroxisome	55.78	56.16
KRH62005	Soybean	cytosol, nucleus, peroxisome, plastid	55.56	56.06
KRH61831	Soybean	cytosol	51.25	55.8
KRH41577	Soybean	cytosol, nucleus, peroxisome	52.83	55.74
KRH39284	Soybean	peroxisome	54.2	55.45
KRH48393	Soybean	peroxisome	53.51	55.27
KRH52507	Soybean	cytosol	49.89	54.73
KRH52661	Soybean	cytosol, nucleus, peroxisome, plastid	54.2	54.32
Zm00001d025005_P002	Maize	cytosol, peroxisome, plastid	54.42	52.63
HORVU2Hr1G116980.1	Barley	plastid	56.92	52.51
EES15155	Sorghum	peroxisome	51.47	51.24
Zm00001d005602_P001	Maize	endoplasmic reticulum	23.58	50.73
TraesCS5B01G566700.1	Wheat	golgi, mitochondrion, plasma membrane	53.29	50.0
TraesCSU01G065000.1	Wheat	cytosol, endoplasmic reticulum, golgi	23.81	48.17
KRH68103	Soybean	cytosol	39.0	44.79
KRH53357	Soybean	extracellular	39.91	44.0
KRH64052	Soybean	vacuole	36.51	42.26
KRG96368	Soybean	cytosol	37.19	42.05
KRH53890	Soybean	cytoskeleton, cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	35.83	41.47
KRH64572	Soybean	cytosol, endoplasmic reticulum, peroxisome	39.0	39.63
Zm00001d019527_P005	Maize	peroxisome	36.28	37.21
OQU88910	Sorghum	plastid	18.59	36.12
TraesCS7D01G038500.1	Wheat	cytosol, nucleus, plasma membrane	48.53	26.26
HORVU7Hr1G007860.1	Barley	cytosol	48.75	25.87

Protein Annotations

EntrezGene:100818345	MapMan:11.2.1.1.2	Gene3D:3.50.50.60	EMBL:ACUP02006514	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase
InterPro:Flavin_mOase-like	EnsemblPlantsGene:GLYMA_10G128700	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497
GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0050660
GO:GO:0050661	GO:GO:0055114	UniProt:I1LAM2	InterPro:IPR036188	EnsemblPlants:KRH33524	ProteinID:KRH33524
ProteinID:KRH33524.1	PFAM:PF00743	PIRSF:PIRSF000332	PRINTS:PR00368	PRINTS:PR00411	PANTHER:PTHR43539
PANTHER:PTHR43539:SF10	SUPFAM:SSF51905	UniParc:UPI000233C915	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:34186431..34189198

Molecular Weight (calculated)

49206.8 Da

IEP (calculated)

9.013

GRAVY (calculated)

-0.165

Length

441 amino acids

Sequence
(BLAST)

001: MHDICLNMPP MVQTFDPEDL FKRRCIWVNG PVIVGAGPSG LAVAACLKEQ GVPFLILERA NCIASLWQNR TYDRLKLHLP KQFCQLPNFP FPEDFPEYPT
101: KFQFISYLES YAKHFNISPQ FNETVQSAKY DETFGLWRVK TIRKIKKLGE ASSGCCGAVE CEVEYICRWL VVATGENSEK VVPEFEGLGE FGGHVMHACD
201: YKSGEGYGGQ KVLVVGCGNS GMEVSLDLCN HNANPSMVVR SSVHVLPREA FGKSTFELAV MLMKRFPLWM VDKILLVLAR LILGNVEKYG LKRPSVGPLE
301: LKHTAGKTPV LDIGALEKIR SGKIKVVPGI RRFFPGKVEL VDGQVLQIDS VVLATGYHSN VPSWLKENDF FTSDGTPRNP FPNGWRGKGG LYAVGFTRKG
401: LSGASLDAIN VAHDIAKNWK EENKQKRKTV AARHRRCISH F

Best Arabidopsis Sequence Match ( AT1G04610.1 )
(BLAST)

001: MYGNNNKKSI NITSMFQNLI PEGSDIFSRR CIWVNGPVIV GAGPSGLAVA AGLKREGVPF IILERANCIA SLWQNRTYDR LKLHLPKQFC QLPNYPFPDE
101: FPEYPTKFQF IQYLESYAAN FDINPKFNET VQSAKYDETF GLWRVKTISN MGQLGSCEFE YICRWIVVAT GENAEKVVPD FEGLEDFGGD VLHAGDYKSG
201: GRYQGKKVLV VGCGNSGMEV SLDLYNHGAN PSMVVRSAVH VLPREIFGKS TFELGVTMMK YMPVWLADKT ILFLARIILG NTDKYGLKRP KIGPLELKNK
301: EGKTPVLDIG ALPKIRSGKI KIVPGIIKFG KGKVELIDGR VLEIDSVILA TGYRSNVPSW LKDNDFFSDD GIPKNPFPNG WKGEAGLYAV GFTRKGLFGA
401: SLDAMSVAHD IANRWKEESK QQKKTAAARH RRCISHF

Arabidopsis Description

YUC3Probable indole-3-pyruvate monooxygenase YUCCA3 [Source:UniProtKB/Swiss-Prot;Acc:O23024]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.