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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 3
  • peroxisome 1
  • plastid 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plastid
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plastid
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:peroxisome
Plant-mPloc:mitochondrion, plastid
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d004467_P001 Maize peroxisome, plasma membrane, plastid 90.76 90.97
Os04t0128900-01 Rice peroxisome 81.52 82.1
TraesCS2D01G012100.1 Wheat cytosol, peroxisome, plastid 80.09 80.28
TraesCS2A01G011500.1 Wheat plastid 79.38 80.14
TraesCS2B01G010100.2 Wheat cytosol, peroxisome, plastid 79.15 79.33
Zm00001d025005_P002 Maize cytosol, peroxisome, plastid 79.86 73.9
TraesCS2B01G562800.1 Wheat mitochondrion 72.51 73.56
TraesCS2D01G535100.1 Wheat mitochondrion 72.27 73.32
TraesCS2A01G533200.1 Wheat mitochondrion 71.8 72.84
GSMUA_Achr11P... Banana cytosol 59.72 72.21
GSMUA_Achr11P... Banana cytosol, mitochondrion, plastid 57.82 72.19
HORVU2Hr1G001820.1 Barley plastid 79.86 71.55
GSMUA_Achr8P12830_001 Banana cytosol, golgi, peroxisome 60.43 70.25
GSMUA_Achr5P20550_001 Banana cytosol, peroxisome, plastid 63.03 70.0
GSMUA_Achr1P03360_001 Banana peroxisome 55.92 68.6
GSMUA_Achr4P25050_001 Banana cytosol 61.14 68.25
CDX89837 Canola cytosol, peroxisome, plastid 67.3 67.62
Bra015293.1-P Field mustard cytosol, peroxisome, plastid 67.3 67.62
CDY18209 Canola cytosol, peroxisome, plastid 66.59 66.59
KRH67507 Soybean cytosol, peroxisome, plastid 66.82 66.51
KRG95789 Soybean cytosol, peroxisome, plastid 66.59 66.27
CDY10073 Canola cytosol, peroxisome, plastid 65.64 65.8
CDY32533 Canola cytosol 65.64 65.64
AT1G04180.1 Thale cress cytosol 65.4 65.56
Bra032524.1-P Field mustard cytosol 65.4 65.4
VIT_07s0005g04800.t01 Wine grape cytosol 65.64 65.33
Bra036002.1-P Field mustard cytosol, peroxisome, plastid 61.37 64.91
CDY14900 Canola cytosol 59.48 64.69
AT5G43890.1 Thale cress cytosol 64.93 64.62
CDY14230 Canola cytosol 60.66 64.48
KRH19661 Soybean cytosol, endoplasmic reticulum, peroxisome 64.45 64.3
Solyc09g064160.2.1 Tomato cytosol 63.03 64.1
PGSC0003DMT400056644 Potato cytosol, endoplasmic reticulum, peroxisome 63.03 64.1
Bra033703.1-P Field mustard cytosol, peroxisome, plastid 64.69 64.08
KRH32274 Soybean cytosol 64.22 64.07
HORVU2Hr1G116980.1 Barley plastid 72.51 64.02
CDX94734 Canola cytosol, peroxisome, plastid 64.45 63.85
CDY22326 Canola cytosol 64.45 63.85
PGSC0003DMT400051713 Potato cytosol 62.8 63.7
Solyc06g083700.2.1 Tomato cytosol 62.8 63.7
Bra010354.1-P Field mustard cytosol 63.98 63.38
CDY69333 Canola cytosol 62.56 63.31
Bra032499.1-P Field mustard cytosol 63.27 63.27
CDY72645 Canola cytosol 51.18 63.16
Bra011055.1-P Field mustard cytosol 63.74 63.15
CDX97452 Canola cytosol 63.74 63.15
CDY35214 Canola cytosol 63.74 63.15
CDY06876 Canola cytosol 63.51 62.91
PGSC0003DMT400038139 Potato peroxisome 60.66 62.75
AT4G28720.1 Thale cress cytosol 63.27 62.68
KXG35000 Sorghum plastid 63.03 62.59
GSMUA_Achr2P04250_001 Banana cytosol 55.92 62.27
CDX89807 Canola plastid 64.22 62.16
Bra015334.1-P Field mustard plastid 64.22 62.16
Solyc06g008050.2.1 Tomato peroxisome 60.43 62.04
CDY61147 Canola plastid 63.98 61.93
AT1G04610.1 Thale cress cytosol 63.98 61.78
GSMUA_Achr1P24210_001 Banana cytosol 54.74 60.95
GSMUA_AchrUn_... Banana mitochondrion 56.87 60.91
KRG90286 Soybean cytosol, peroxisome, plastid 63.27 60.82
KRH33524 Soybean cytosol, peroxisome, plastid 63.51 60.77
CDY53200 Canola golgi, peroxisome, plastid 61.85 60.7
TraesCSU01G065000.1 Wheat cytosol, endoplasmic reticulum, golgi 31.28 60.55
GSMUA_Achr11P... Banana cytosol, mitochondrion 54.03 60.48
AT2G33230.1 Thale cress plastid 61.61 60.32
CDY19472 Canola cytosol, peroxisome, plastid 62.32 60.32
Bra005513.1-P Field mustard cytosol, peroxisome, plastid 62.09 60.09
CDY17153 Canola peroxisome 61.85 59.86
PGSC0003DMT400030255 Potato cytosol 59.24 59.67
PGSC0003DMT400056645 Potato cytosol, peroxisome, plastid 34.83 59.27
VIT_05s0051g00060.t01 Wine grape peroxisome, plastid 61.37 59.13
Solyc09g091090.1.1 Tomato peroxisome 59.0 57.77
Zm00001d005602_P001 Maize endoplasmic reticulum 27.96 57.56
KXG33311 Sorghum cytosol 54.98 53.21
EES15155 Sorghum peroxisome 55.45 52.82
EES02224 Sorghum peroxisome 52.13 51.64
OQU87233 Sorghum cytosol 51.42 51.42
OQU93186 Sorghum cytosol 51.66 50.11
EES16059 Sorghum cytosol 50.95 47.99
OQU79511 Sorghum cytosol 50.47 47.23
OQU78863 Sorghum extracellular 41.0 45.05
EES08387 Sorghum extracellular, plasma membrane 40.05 44.95
EES08388 Sorghum extracellular 38.39 44.88
KXG32253 Sorghum cytosol, peroxisome, vacuole 40.76 42.36
OQU88910 Sorghum plastid 22.04 40.97
TraesCS7D01G038500.1 Wheat cytosol, nucleus, plasma membrane 60.43 31.29
HORVU7Hr1G007860.1 Barley cytosol 59.48 30.2
Protein Annotations
MapMan:11.2.1.1.2Gene3D:3.50.50.60EntrezGene:8065984UniProt:C5YBT6EnsemblPlants:EES11777ProteinID:EES11777
ProteinID:EES11777.1InterPro:FAD/NAD-bd_sfInterPro:Flavin_mOase-likeGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004497GO:GO:0004499GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0016491
GO:GO:0050660GO:GO:0050661GO:GO:0055114InterPro:IPR036188PFAM:PF00743PRINTS:PR00368
PRINTS:PR00469PANTHER:PTHR43539PANTHER:PTHR43539:SF2InterPro:Pyridine_nuc-diS_OxRdtase_2EnsemblPlantsGene:SORBI_3006G012200SUPFAM:SSF51905
UniParc:UPI0001A871BDRefSeq:XP_002447449.1::::
Description
hypothetical protein
Coordinates
chr6:-:1783913..1786185
Molecular Weight (calculated)
46480.3 Da
IEP (calculated)
9.113
GRAVY (calculated)
-0.080
Length
422 amino acids
Sequence
(BLAST)
001: MGLLPTDRMD SLFSPRCVWV NGPIIVGAGP SGLAVAACLR EQGVPYVILE RADCIAALWQ KRTYNRLKLH LPKRFCELPR MPFPDHYPEY PTRRQFIDYL
101: QDYAAKFEIK PEFSTTVLSA RYDETSGLWR VVTSAPNNGG DMEYIGRWLV VATGENAEAV VPDVPGLDGF DGKVTHVSEY KSGECYAGKR VLVVGCGNSG
201: MEVSLDLSDH GARPAMVVRD AVHVLPREVL GKSTFELAVL LMRWLPLWIV DKIMVLLAWL VLGNLAKLGL RRPAAGGPLE LKEKYGRTPV LDYGALARIR
301: AGDIAVVPAV TRFGKGGQVE LADGRTLNFD AVILATGYRS NVPQWLQGND FFNKDGYPKT AFPHGWKGES GLYAVGFTRR GLSGASADAV RIAKDLGNVW
401: REETKPTKRA GACHRRCISV VF
Best Arabidopsis Sequence Match ( AT1G04180.1 )
(BLAST)
001: MENMFRLMAS EEYFSERRCV WVNGPVIVGA GPSGLATAAC LHDQGVPFVV VERSDCIASL WQKRTYDRLK LHLPKKFCQL PKMPFPDHYP EYPTKRQFID
101: YLESYANRFD IKPEFNKSVE SARFDETSGL WRVRTTSDGE EMEYICRWLV VATGENAERV VPEINGLMTE FDGEVIHACE YKSGEKFRGK RVLVVGCGNS
201: GMEVSLDLAN HNAITSMVVR SSVHVLPREI MGKSTFGISV MMMKWLPLWL VDKLLLILSW LVLGSLSNYG LKRPDIGPME LKSMTGKTPV LDIGALEKIK
301: SGDVEIVPAI KQFSRHHVEL VDGQKLDIDA VVLATGYRSN VPSWLQESEF FSKNGFPKSP FPNAWKGKSG LYAAGFTRKG LAGASVDAVN IAQDIGNVWR
401: EETKRQKMRR NVGHRRCISV A
Arabidopsis Description
YUC9Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A178WB22]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.