Factsheet for TraesCS2B01G562800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G535100.1	Wheat	mitochondrion	98.8	98.8
TraesCS2A01G533200.1	Wheat	mitochondrion	98.08	98.08
HORVU2Hr1G116980.1	Barley	plastid	97.12	84.52
Os04t0128900-01	Rice	peroxisome	74.76	74.22
TraesCS2B01G010100.2	Wheat	cytosol, peroxisome, plastid	74.76	73.87
EES11777	Sorghum	cytosol, peroxisome, plastid	73.56	72.51
Zm00001d004467_P001	Maize	peroxisome, plasma membrane, plastid	72.6	71.73
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	54.57	67.16
GSMUA_Achr8P12830_001	Banana	cytosol, golgi, peroxisome	57.69	66.12
GSMUA_Achr1P03360_001	Banana	peroxisome	54.57	65.99
GSMUA_Achr11P...	Banana	cytosol	55.29	65.9
GSMUA_Achr5P20550_001	Banana	cytosol, peroxisome, plastid	57.93	63.42
CDY14900	Canola	cytosol	58.41	62.63
GSMUA_Achr4P25050_001	Banana	cytosol	56.73	62.43
Bra036002.1-P	Field mustard	cytosol, peroxisome, plastid	59.86	62.41
VIT_07s0005g04800.t01	Wine grape	cytosol	62.26	61.08
Solyc09g064160.2.1	Tomato	cytosol	60.82	60.96
Bra033703.1-P	Field mustard	cytosol, peroxisome, plastid	61.54	60.09
PGSC0003DMT400056644	Potato	cytosol, endoplasmic reticulum, peroxisome	59.86	60.0
CDY14230	Canola	cytosol	56.97	59.7
KRG95789	Soybean	cytosol, peroxisome, plastid	60.82	59.67
KRH67507	Soybean	cytosol, peroxisome, plastid	60.82	59.67
CDY22326	Canola	cytosol	61.06	59.62
CDX94734	Canola	cytosol, peroxisome, plastid	60.82	59.39
CDY69333	Canola	cytosol	59.38	59.23
AT5G43890.1	Thale cress	cytosol	60.34	59.2
KRH19661	Soybean	cytosol, endoplasmic reticulum, peroxisome	60.1	59.1
KRH32274	Soybean	cytosol	60.1	59.1
CDY72645	Canola	cytosol	48.56	59.06
GSMUA_Achr2P04250_001	Banana	cytosol	53.61	58.84
Bra015293.1-P	Field mustard	cytosol, peroxisome, plastid	59.38	58.81
CDX89837	Canola	cytosol, peroxisome, plastid	59.38	58.81
Zm00001d025005_P002	Maize	cytosol, peroxisome, plastid	64.42	58.77
Bra032499.1-P	Field mustard	cytosol	59.62	58.77
CDY32533	Canola	cytosol	59.62	58.77
CDY10073	Canola	cytosol, peroxisome, plastid	59.38	58.67
PGSC0003DMT400038139	Potato	peroxisome	57.45	58.58
CDY18209	Canola	cytosol, peroxisome, plastid	59.38	58.53
Bra032524.1-P	Field mustard	cytosol	59.38	58.53
AT1G04180.1	Thale cress	cytosol	59.13	58.43
Solyc06g008050.2.1	Tomato	peroxisome	57.69	58.39
CDX97452	Canola	cytosol	59.62	58.22
Bra011055.1-P	Field mustard	cytosol	59.38	57.98
CDY35214	Canola	cytosol	59.38	57.98
CDY06876	Canola	cytosol	59.38	57.98
AT4G28720.1	Thale cress	cytosol	59.13	57.75
Bra010354.1-P	Field mustard	cytosol	59.13	57.75
Solyc06g083700.2.1	Tomato	cytosol	57.45	57.45
PGSC0003DMT400051713	Potato	cytosol	57.45	57.45
KRG90286	Soybean	cytosol, peroxisome, plastid	60.34	57.18
KRH33524	Soybean	cytosol, peroxisome, plastid	60.58	57.14
GSMUA_AchrUn_...	Banana	mitochondrion	53.85	56.85
CDY61147	Canola	plastid	59.38	56.65
CDY53200	Canola	golgi, peroxisome, plastid	58.41	56.51
PGSC0003DMT400056645	Potato	cytosol, peroxisome, plastid	33.65	56.45
Bra015334.1-P	Field mustard	plastid	59.13	56.42
CDX89807	Canola	plastid	59.13	56.42
AT1G04610.1	Thale cress	cytosol	59.13	56.29
AT2G33230.1	Thale cress	plastid	57.69	55.68
GSMUA_Achr1P24210_001	Banana	cytosol	50.72	55.67
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	50.0	55.17
VIT_05s0051g00060.t01	Wine grape	peroxisome, plastid	57.69	54.79
PGSC0003DMT400030255	Potato	cytosol	55.05	54.65
CDY19472	Canola	cytosol, peroxisome, plastid	56.73	54.13
Bra005513.1-P	Field mustard	cytosol, peroxisome, plastid	56.73	54.13
CDY17153	Canola	peroxisome	56.49	53.9
Solyc09g091090.1.1	Tomato	peroxisome	54.57	52.67
TraesCS5B01G107000.1	Wheat	peroxisome	25.96	51.43
Zm00001d005602_P001	Maize	endoplasmic reticulum	25.24	51.22
TraesCS5B01G566700.1	Wheat	golgi, mitochondrion, plasma membrane	57.21	50.64
TraesCS3B01G314700.1	Wheat	peroxisome	52.16	49.66
TraesCS3B01G261900.1	Wheat	cytosol	48.32	49.63
TraesCS4B01G278300.1	Wheat	cytosol	50.24	47.83
TraesCS3B01G176800.1	Wheat	cytosol	47.12	44.44
TraesCS2B01G595700.1	Wheat	endoplasmic reticulum, plastid	40.14	43.72
TraesCS2B01G596000.1	Wheat	endoplasmic reticulum, plastid	39.9	43.46
TraesCS2B01G595800.1	Wheat	endoplasmic reticulum, plastid	39.9	43.46
TraesCS2B01G596100.1	Wheat	extracellular	39.66	43.19
TraesCS2B01G601800.1	Wheat	extracellular	38.94	42.41
TraesCS5B01G538300.1	Wheat	extracellular	38.94	42.41
TraesCS2B01G600600.1	Wheat	extracellular	38.7	42.15
TraesCS2B01G595900.1	Wheat	endoplasmic reticulum, extracellular, plastid	29.57	41.98
TraesCS7B01G004700.1	Wheat	extracellular	38.46	41.88
TraesCS2B01G596200.1	Wheat	plastid	37.98	41.36
TraesCS6B01G033700.1	Wheat	plasma membrane	31.97	41.05
TraesCS5B01G216000.1	Wheat	cytosol, peroxisome, plasma membrane	37.26	39.14

Protein Annotations

MapMan:11.2.1.1.2	Gene3D:3.50.50.60	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_mOase-like	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004499	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0050660	GO:GO:0050661	GO:GO:0055114	InterPro:IPR036188	PFAM:PF00743	PRINTS:PR00368
PRINTS:PR00469	PANTHER:PTHR43539	PANTHER:PTHR43539:SF2	InterPro:Pyridine_nuc-diS_OxRdtase_2	SUPFAM:SSF51905	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS2B01G562800	EnsemblPlants:TraesCS2B01G562800.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2B:-:754927415..754928665

Molecular Weight (calculated)

45884.7 Da

IEP (calculated)

8.697

GRAVY (calculated)

-0.029

Length

416 amino acids

Sequence
(BLAST)

001: MMLRMQSLCP PRRVSVDGPI IVGAGPSGLA VAASLGEEGM PFLMLEREDC IASLWQKRTY DRVKLHIPKH FCELPRMPFP ESYPEYPTRR QFIDYLESYA
101: ARFDIKPEFN TTVLSAHYDN TSGLWHAQAT RAGGAQMEYI GRWLVVATGE NAVNVVPDIP GLGGFCGEVT HVSHYKSGEP YSGKRVLVVG CGNSGMEVSL
201: DLCDHGAHPF MVVRDAMHVI PREVLGKSTF ELAMLLMAWL PLWIVDKIMI FLAWLVLGDL DKLGIHRPAV GPLTLKHTQG RAPVLDTGAL ARIRSGQITV
301: VPGITRFTNS DAVLSDGTVV HVDAVILATG YRSNVPQWLR ATDFFGKDGY PKTEFPNGWK GQFGLYSVGF ARRGLSGASA DAVRIAKDLC QLWKEESRPA
401: KKAGRPCYRR SISVVL

Best Arabidopsis Sequence Match ( AT1G04610.1 )
(BLAST)

001: MYGNNNKKSI NITSMFQNLI PEGSDIFSRR CIWVNGPVIV GAGPSGLAVA AGLKREGVPF IILERANCIA SLWQNRTYDR LKLHLPKQFC QLPNYPFPDE
101: FPEYPTKFQF IQYLESYAAN FDINPKFNET VQSAKYDETF GLWRVKTISN MGQLGSCEFE YICRWIVVAT GENAEKVVPD FEGLEDFGGD VLHAGDYKSG
201: GRYQGKKVLV VGCGNSGMEV SLDLYNHGAN PSMVVRSAVH VLPREIFGKS TFELGVTMMK YMPVWLADKT ILFLARIILG NTDKYGLKRP KIGPLELKNK
301: EGKTPVLDIG ALPKIRSGKI KIVPGIIKFG KGKVELIDGR VLEIDSVILA TGYRSNVPSW LKDNDFFSDD GIPKNPFPNG WKGEAGLYAV GFTRKGLFGA
401: SLDAMSVAHD IANRWKEESK QQKKTAAARH RRCISHF

Arabidopsis Description

YUC3Probable indole-3-pyruvate monooxygenase YUCCA3 [Source:UniProtKB/Swiss-Prot;Acc:O23024]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.