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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • mitochondrion 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, secretory
iPSORT:mitochondrion
MultiLoc:mitochondrion
TargetP:secretory
YLoc:mitochondrion
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU7Hr1G088900.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G28720.1 HORVU7Hr1G088900.1 AT4G19030.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU5Hr1G050630.3 Barley mitochondrion, plasma membrane 81.88 97.98
TraesCS4A01G313200.1 Wheat mitochondrion 92.75 93.66
TraesCS5B01G566700.1 Wheat golgi, mitochondrion, plasma membrane 94.44 83.19
Zm00001d005439_P001 Maize plastid 73.43 76.38
Os07t0437000-01 Rice mitochondrion 72.46 75.38
KXG35000 Sorghum plastid 72.95 71.06
GSMUA_Achr11P... Banana cytosol 52.17 61.89
GSMUA_Achr11P... Banana cytosol, mitochondrion, plastid 50.48 61.83
GSMUA_Achr8P12830_001 Banana cytosol, golgi, peroxisome 53.86 61.43
GSMUA_Achr1P03360_001 Banana peroxisome 50.72 61.05
CDY14900 Canola cytosol 55.07 58.76
GSMUA_Achr4P25050_001 Banana cytosol 53.62 58.73
GSMUA_Achr5P20550_001 Banana cytosol, peroxisome, plastid 53.86 58.68
Bra036002.1-P Field mustard cytosol, peroxisome, plastid 56.28 58.4
CDX89837 Canola cytosol, peroxisome, plastid 59.18 58.33
Bra015293.1-P Field mustard cytosol, peroxisome, plastid 58.94 58.1
CDY18209 Canola cytosol, peroxisome, plastid 58.7 57.58
Solyc09g064160.2.1 Tomato cytosol 57.49 57.35
AT1G04180.1 Thale cress cytosol 58.21 57.24
CDY32533 Canola cytosol 58.21 57.11
PGSC0003DMT400056644 Potato cytosol, endoplasmic reticulum, peroxisome 57.25 57.11
Bra032524.1-P Field mustard cytosol 57.97 56.87
CDY10073 Canola cytosol, peroxisome, plastid 57.73 56.77
CDY14230 Canola cytosol 54.35 56.68
KRG95789 Soybean cytosol, peroxisome, plastid 57.97 56.6
VIT_07s0005g04800.t01 Wine grape cytosol 57.97 56.6
KRH19661 Soybean cytosol, endoplasmic reticulum, peroxisome 57.49 56.26
PGSC0003DMT400051713 Potato cytosol 56.28 56.01
KRH67507 Soybean cytosol, peroxisome, plastid 57.25 55.9
CDX94734 Canola cytosol, peroxisome, plastid 57.49 55.87
Bra033703.1-P Field mustard cytosol, peroxisome, plastid 57.49 55.87
KRH32274 Soybean cytosol 57.0 55.79
Solyc06g083700.2.1 Tomato cytosol 56.04 55.77
CDY22326 Canola cytosol 57.25 55.63
Bra032499.1-P Field mustard cytosol 56.52 55.45
Bra010354.1-P Field mustard cytosol 56.76 55.16
CDX97452 Canola cytosol 56.76 55.16
PGSC0003DMT400038139 Potato peroxisome 54.35 55.15
GSMUA_AchrUn_... Banana mitochondrion 52.42 55.08
HORVU3Hr1G057950.1 Barley cytosol 53.62 54.68
CDY72645 Canola cytosol 45.17 54.68
AT5G43890.1 Thale cress cytosol 55.8 54.48
CDY06876 Canola cytosol 56.04 54.46
CDY35214 Canola cytosol 56.04 54.46
Bra011055.1-P Field mustard cytosol 56.04 54.46
CDY53200 Canola golgi, peroxisome, plastid 56.52 54.42
PGSC0003DMT400030255 Potato cytosol 55.07 54.42
GSMUA_Achr2P04250_001 Banana cytosol 49.76 54.35
Solyc06g008050.2.1 Tomato peroxisome 53.86 54.26
CDY69333 Canola cytosol 54.59 54.2
CDX89807 Canola plastid 57.0 54.13
Bra015334.1-P Field mustard plastid 57.0 54.13
CDY61147 Canola plastid 57.0 54.13
AT4G28720.1 Thale cress cytosol 55.56 53.99
GSMUA_Achr11P... Banana cytosol, mitochondrion 49.03 53.85
HORVU5Hr1G028100.1 Barley golgi, mitochondrion, peroxisome 46.14 53.8
CDY17153 Canola peroxisome 56.28 53.44
AT1G04610.1 Thale cress cytosol 56.28 53.32
GSMUA_Achr1P24210_001 Banana cytosol 48.79 53.3
HORVU2Hr1G001820.1 Barley plastid 60.63 53.29
KRH33524 Soybean cytosol, peroxisome, plastid 56.76 53.29
VIT_05s0051g00060.t01 Wine grape peroxisome, plastid 56.04 52.97
AT2G33230.1 Thale cress plastid 55.07 52.9
KRG90286 Soybean cytosol, peroxisome, plastid 56.04 52.85
PGSC0003DMT400056645 Potato cytosol, peroxisome, plastid 31.64 52.82
CDY19472 Canola cytosol, peroxisome, plastid 55.56 52.75
Solyc09g091090.1.1 Tomato peroxisome 54.83 52.67
Bra005513.1-P Field mustard cytosol, peroxisome, plastid 55.07 52.29
HORVU4Hr1G073700.1 Barley cytosol 51.93 51.81
HORVU3Hr1G069580.2 Barley cytosol 54.59 51.72
HORVU2Hr1G116980.1 Barley plastid 57.97 50.21
HORVU7Hr1G023900.1 Barley endoplasmic reticulum, extracellular, plastid 21.5 44.28
Zm00001d019527_P005 Maize peroxisome 45.65 43.95
HORVU3Hr1G030390.2 Barley cytosol 46.62 43.57
OQU88910 Sorghum plastid 23.43 42.73
HORVU7Hr1G017620.2 Barley plasma membrane 39.37 42.12
HORVU1Hr1G078200.2 Barley endoplasmic reticulum, extracellular 38.41 41.95
HORVU1Hr1G022530.34 Barley extracellular 38.65 41.88
HORVU7Hr1G017680.1 Barley extracellular 38.41 41.62
HORVU7Hr1G013170.3 Barley cytosol 40.1 41.6
HORVU6Hr1G019210.2 Barley cytoskeleton, cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 37.92 41.1
HORVU1Hr1G022670.1 Barley extracellular 37.92 41.1
HORVU7Hr1G017660.1 Barley extracellular 37.92 40.78
HORVU7Hr1G017630.2 Barley extracellular 37.44 40.36
HORVU0Hr1G001150.2 Barley plasma membrane 37.2 40.31
HORVU1Hr1G067720.2 Barley plasma membrane 37.2 40.31
HORVU0Hr1G031640.2 Barley plasma membrane 37.2 40.31
HORVU7Hr1G023910.1 Barley endoplasmic reticulum, extracellular, plastid 36.72 39.79
HORVU0Hr1G000290.1 Barley extracellular 31.88 39.4
HORVU7Hr1G007860.1 Barley cytosol 49.76 24.79
Protein Annotations
EnsemblPlants:HORVU5Hr1G125560.2EnsemblPlantsGene:HORVU5Hr1G125560GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152
GO:GO:0016491GO:GO:0055114InterPro:FAD/NAD-bd_sfInterPro:IPR036188InterPro:Pyridine_nuc-diS_OxRdtase_2PANTHER:PTHR43539
PANTHER:PTHR43539:SF20PFAM:PF13738PRINTS:PR00368PRINTS:PR00469SEG:segSUPFAM:SSF51905
TMHMM:TMhelixUniParc:UPI000B4802B8UniProt:A0A287T392MapMan:11.2.1.1.2::
Description
No Description!
Coordinates
chrchr5H:+:668981842..668984422
Molecular Weight (calculated)
44933.1 Da
IEP (calculated)
8.364
GRAVY (calculated)
-0.032
Length
414 amino acids
Sequence
(BLAST)
001: YMMASRTMWV NGPIIVGAGP AGIAAAACLH TRGVPSVVLD RDDCLASLWQ RRTYDRLRLH LPKHFCQLPG MPFPDHYPEY PTKHQFVAYL QSYAAAFHVH
101: PRFRQSVVSA RFDHAAGLWR VQASDQDTGI TTEYIGRWLV VATGENAERV IPDLDGADSF KGPVTHVSEY KSGEPYKGKR VLVVGCGNSG MEVCLDLCDH
201: GARPSMVVRD GVHVLPREML GVATFSVAVF LLRFLPLRVV DRLLVLLAGL FLGGDLARLG LRRPSHGGPL ELKNSKGRTP VLDIGALEKI RAGDIKIVPG
301: VKRLEAGGAE LVDGRFVAAD AVILATGYHS NVPQWLKGSD FFSGEGYPKV DFPEGWKGES GLYSVGFTRR GLAGLSLDAV RVAGDIAAEY HTTSPSIVPQ
401: PTQLVPSSQS QAET
Best Arabidopsis Sequence Match ( AT1G04180.1 )
(BLAST)
001: MENMFRLMAS EEYFSERRCV WVNGPVIVGA GPSGLATAAC LHDQGVPFVV VERSDCIASL WQKRTYDRLK LHLPKKFCQL PKMPFPDHYP EYPTKRQFID
101: YLESYANRFD IKPEFNKSVE SARFDETSGL WRVRTTSDGE EMEYICRWLV VATGENAERV VPEINGLMTE FDGEVIHACE YKSGEKFRGK RVLVVGCGNS
201: GMEVSLDLAN HNAITSMVVR SSVHVLPREI MGKSTFGISV MMMKWLPLWL VDKLLLILSW LVLGSLSNYG LKRPDIGPME LKSMTGKTPV LDIGALEKIK
301: SGDVEIVPAI KQFSRHHVEL VDGQKLDIDA VVLATGYRSN VPSWLQESEF FSKNGFPKSP FPNAWKGKSG LYAAGFTRKG LAGASVDAVN IAQDIGNVWR
401: EETKRQKMRR NVGHRRCISV A
Arabidopsis Description
YUC9Flavin-containing monooxygenase [Source:UniProtKB/TrEMBL;Acc:A0A178WB22]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.