Factsheet for Bra003196.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
peroxisome 2
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	plasma membrane
PProwler:	secretory
PTS1:	peroxisome
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002403.1-P
Bra006619.1-P
Bra007603.1-P
Bra011585.1-P
Bra014437.1-P
Bra017697.1-P
Bra020182.1-P
Bra034675.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G54820.1	Bra007603.1-P	AT3G61430.1	21798944
AT3G54820.1	Bra014437.1-P	AT3G61430.1	21798944
AT3G54820.1	Bra011585.1-P	AT4G35100.1	21798944
AT3G54820.1	Bra017697.1-P	AT4G35100.1	21798944
AT3G54820.1	Bra034675.1-P	AT4G35100.1	21798944
AT3G54820.1	Bra002403.1-P	AT5G22290.1	21798944
AT3G54820.1	Bra006619.1-P	AT5G22290.1	21798944
AT3G54820.1	Bra020182.1-P	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67611	Canola	plasma membrane	98.6	98.6
CDY07519	Canola	plasma membrane	98.25	98.25
Bra007100.1-P	Field mustard	plasma membrane	95.1	95.1
AT3G54820.1	Thale cress	plasma membrane	93.01	93.01
VIT_08s0040g01890.t01	Wine grape	plasma membrane	79.02	78.75
TraesCS2A01G198500.1	Wheat	plasma membrane	79.72	78.62
Bra005216.1-P	Field mustard	cytosol, golgi, plasma membrane	63.29	78.36
TraesCS2D01G206300.1	Wheat	golgi	79.37	78.28
TraesCS2B01G225900.1	Wheat	golgi	79.37	78.28
Bra023103.1-P	Field mustard	plasma membrane	77.97	78.25
Os07t0448800-01	Rice	plasma membrane	79.02	77.93
EER98451	Sorghum	plasma membrane	79.02	77.93
Bra006997.1-P	Field mustard	plasma membrane	77.97	77.7
Zm00001d019563_P006	Maize	plasma membrane	78.67	77.59
Bra023102.1-P	Field mustard	plasma membrane	76.57	77.39
Bra005215.1-P	Field mustard	cytosol, peroxisome, plasma membrane	63.99	76.89
Zm00001d005421_P001	Maize	plasma membrane	77.97	76.37
Bra006650.1-P	Field mustard	plasma membrane	75.17	75.44
Bra011585.1-P	Field mustard	plasma membrane	73.78	75.09
Bra000111.1-P	Field mustard	plasma membrane	75.52	75.0
Bra002462.1-P	Field mustard	cytosol	68.18	75.0
Bra020238.1-P	Field mustard	plasma membrane	74.13	74.91
Bra017697.1-P	Field mustard	cytosol	73.08	74.38
Bra034675.1-P	Field mustard	cytosol, peroxisome, plasma membrane	72.73	74.02
Bra032644.1-P	Field mustard	plasma membrane	68.18	68.18
Bra000974.1-P	Field mustard	cytosol, peroxisome, plasma membrane	68.18	67.71
Bra033248.1-P	Field mustard	cytosol, peroxisome, plasma membrane	67.48	67.48
Bra019307.1-P	Field mustard	cytosol, peroxisome, plasma membrane	67.48	67.25
HORVU2Hr1G038740.1	Barley	golgi, mitochondrion, plasma membrane	79.72	66.86
Bra004950.1-P	Field mustard	cytosol, peroxisome, plasma membrane	66.78	66.78
Bra014437.1-P	Field mustard	plasma membrane	66.08	66.08
Bra007603.1-P	Field mustard	plasma membrane	65.73	65.73
Bra039301.1-P	Field mustard	cytosol, peroxisome, plasma membrane	58.74	60.0
Bra027181.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	33.22	38.31
Bra001626.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	32.87	37.75
Bra021171.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	27.62	37.62
Bra024943.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	31.12	35.46
Bra037415.1-P	Field mustard	cytosol	31.12	35.32
Bra022131.1-P	Field mustard	extracellular	25.17	35.29
Bra026245.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	30.42	34.8
Bra025210.1-P	Field mustard	plasma membrane	30.77	34.78
Bra032937.1-P	Field mustard	plasma membrane	30.77	34.78
Bra034271.1-P	Field mustard	cytosol, plasma membrane, vacuole	29.02	33.33
Bra017222.1-P	Field mustard	cytosol	29.02	33.07
Bra016014.1-P	Field mustard	cytosol	29.72	32.08
Bra008079.1-P	Field mustard	golgi, mitochondrion, plasma membrane	29.72	31.95
Bra025947.1-P	Field mustard	cytosol, golgi, plasma membrane	29.37	31.46
Bra031005.1-P	Field mustard	golgi, mitochondrion, plasma membrane	27.97	29.96
Bra018148.1-P	Field mustard	extracellular, plasma membrane, plastid	24.83	27.84

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.2	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	EnsemblPlantsGene:Bra003196	EnsemblPlants:Bra003196.1
EnsemblPlants:Bra003196.1-P	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	UniProt:M4CG63
InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF260	SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI0002541441	:

Description

AT3G54820 (E=7e-157) PIP2D, PIP2;5 | PIP2;5 (PLASMA MEMBRANE INTRINSIC PROTEIN 2;5); water channel

Coordinates

chrA07:+:11815579..11817653

Molecular Weight (calculated)

30492.1 Da

IEP (calculated)

8.677

GRAVY (calculated)

0.512

Length

286 amino acids

Sequence
(BLAST)

001: MTKDVAGEKG SFSGKDYQDP PPEPLFDATE LGRWSFYRAL IAEFIATLLF LYVTVMTVIG YKSQTDPALN PDQCAGVGVL GIAWAFGGLI FILVYCTVGI
101: SGGHINPAVT FGLFLARKVT LVRAVMYMVA QCLGAICGVA LVKSFQSSYY TRYGGGANGL THGYSIGTGV AAEIIGTFVL VYTVFSATDP KRSARDSHVP
201: VLAPLPIGFA VFIVHLATIP ITGTGINPAR SLGAAIICNK DQAWDHHWIF WVGPFAGAAL AAFYHQFVLR AGAVKALGSF RSQSHV

Best Arabidopsis Sequence Match ( AT3G54820.1 )
(BLAST)

001: MTKEVVGDKR SFSGKDYQDP PPEPLFDATE LGKWSFYRAL IAEFIATLLF LYVTIMTVIG YKSQTDPALN PDQCTGVGVL GIAWAFGGMI FILVYCTAGI
101: SGGHINPAVT FGLLLARKVT LVRAVMYMVA QCLGAICGVA LVKAFQSAYF TRYGGGANGL SDGYSIGTGV AAEIIGTFVL VYTVFSATDP KRSARDSHVP
201: VLAPLPIGFA VFIVHLATIP ITGTGINPAR SLGAAIIYNK DKAWDHHWIF WVGPFAGAAI AAFYHQFVLR AGAIKALGSF RSQPHV

Arabidopsis Description

PIP2-5Probable aquaporin PIP2-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV31]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.