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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • golgi 5
  • plasma membrane 5
  • endoplasmic reticulum 5
  • vacuole 8
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
EpiLoc:vacuole
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY28932 Canola endoplasmic reticulum, extracellular, vacuole 96.57 93.81
CDY51678 Canola plasma membrane, vacuole 97.55 79.6
AT5G47450.1 Thale cress golgi, plasma membrane 93.14 76.0
Os02t0658100-01 Rice vacuole 76.47 75.73
Bra024943.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 93.14 75.7
Bra026245.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 90.2 73.6
Bra021171.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 72.06 70.0
PGSC0003DMT400030994 Potato endoplasmic reticulum, plasma membrane, vacuole 82.35 67.2
Solyc06g060760.2.1 Tomato endoplasmic reticulum 82.35 67.2
VIT_00s0229g00130.t01 Wine grape endoplasmic reticulum, plasma membrane, vacuole 79.41 64.8
GSMUA_Achr11P... Banana endoplasmic reticulum, plasma membrane 77.94 63.86
KRH77347 Soybean mitochondrion 77.94 63.86
KRH28112 Soybean mitochondrion 77.45 63.45
GSMUA_Achr11P... Banana extracellular, plasma membrane 77.45 63.45
Zm00001d026177_P001 Maize extracellular 76.96 63.31
Zm00001d002738_P001 Maize plasma membrane 76.47 62.9
EES12617 Sorghum plasma membrane 76.47 62.65
Zm00001d051362_P001 Maize plasma membrane 76.47 62.65
KXG31086 Sorghum golgi, plasma membrane, vacuole 76.47 62.65
Zm00001d017485_P002 Maize endoplasmic reticulum, extracellular, plasma membrane 76.47 62.4
TraesCS6D01G232100.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 75.98 62.25
TraesCS6A01G250300.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 75.98 62.25
TraesCS2B01G433200.1 Wheat plasma membrane 75.49 62.1
HORVU6Hr1G062980.1 Barley endoplasmic reticulum, plasma membrane, vacuole 75.49 61.85
HORVU0Hr1G032130.2 Barley endoplasmic reticulum, plasma membrane, vacuole 75.49 61.85
TraesCS6B01G275100.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 75.49 61.85
TraesCS2D01G411400.1 Wheat plasma membrane 75.0 61.69
TraesCS2A01G414100.1 Wheat plasma membrane 75.0 61.69
Bra001626.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 73.04 59.84
Bra027181.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 71.57 58.87
Bra025210.1-P Field mustard plasma membrane 67.16 54.15
Bra032937.1-P Field mustard plasma membrane 67.16 54.15
Bra017222.1-P Field mustard cytosol 66.18 53.78
Bra037415.1-P Field mustard cytosol 54.9 44.44
Os04t0550900-00 Rice endoplasmic reticulum, extracellular, vacuole 30.88 44.37
Bra034271.1-P Field mustard cytosol, plasma membrane, vacuole 52.94 43.37
Bra008079.1-P Field mustard golgi, mitochondrion, plasma membrane 55.39 42.48
Bra016014.1-P Field mustard cytosol 53.92 41.51
Bra031005.1-P Field mustard golgi, mitochondrion, plasma membrane 52.94 40.45
Bra025947.1-P Field mustard cytosol, golgi, plasma membrane 52.45 40.07
Bra018148.1-P Field mustard extracellular, plasma membrane, plastid 40.69 32.55
Bra005216.1-P Field mustard cytosol, golgi, plasma membrane 34.8 30.74
Bra002462.1-P Field mustard cytosol 36.76 28.85
Bra011585.1-P Field mustard plasma membrane 37.75 27.4
Bra020238.1-P Field mustard plasma membrane 37.75 27.21
Bra034675.1-P Field mustard cytosol, peroxisome, plasma membrane 37.25 27.05
Bra017697.1-P Field mustard cytosol 37.25 27.05
Bra006650.1-P Field mustard plasma membrane 37.75 27.02
Bra023103.1-P Field mustard plasma membrane 36.27 25.96
Bra006997.1-P Field mustard plasma membrane 36.27 25.78
Bra000111.1-P Field mustard plasma membrane 36.27 25.69
Bra023102.1-P Field mustard plasma membrane 35.29 25.44
Bra003196.1-P Field mustard plasma membrane 35.29 25.17
Bra033248.1-P Field mustard cytosol, peroxisome, plasma membrane 34.8 24.83
Bra032644.1-P Field mustard plasma membrane 34.8 24.83
Bra007100.1-P Field mustard plasma membrane 34.8 24.83
Bra000974.1-P Field mustard cytosol, peroxisome, plasma membrane 34.8 24.65
Bra004950.1-P Field mustard cytosol, peroxisome, plasma membrane 34.31 24.48
Bra019307.1-P Field mustard cytosol, peroxisome, plasma membrane 34.31 24.39
Bra014437.1-P Field mustard plasma membrane 33.82 24.13
Bra007603.1-P Field mustard plasma membrane 33.82 24.13
Bra005215.1-P Field mustard cytosol, peroxisome, plasma membrane 26.47 22.69
Bra039301.1-P Field mustard cytosol, peroxisome, plasma membrane 29.41 21.43
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.3InterPro:Aquaporin-likeInterPro:Aquaporin_transptrEnsemblPlantsGene:Bra022131EnsemblPlants:Bra022131.1
EnsemblPlants:Bra022131.1-PGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0015267GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:IPR023271UniProt:M4E034
InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783ScanProsite:PS00221PANTHER:PTHR19139
PANTHER:PTHR19139:SF257SUPFAM:SSF81338TMHMM:TMhelixUniParc:UPI00025462FBSEG:seg:
Description
AT5G47450 (E=3e-098) ATTIP2;3, TIP2;3, DELTA-TIP3 | AtTIP2;3; ammonia transporter/ methylammonium transmembrane transporter/ water channel
Coordinates
chrA02:-:19600919..19608969
Molecular Weight (calculated)
20685.4 Da
IEP (calculated)
4.678
GRAVY (calculated)
0.916
Length
204 amino acids
Sequence
(BLAST)
001: MPRALDPAGL VAIAVAHAFA LFVGVSIAAN ISGGHLNPAV TLGLAVGGNI TLITGFLYWI AQCLGSIVAC LLLVYVTNGE SVPTHGVGAG LGALEGIVME
101: IVVTFALVYT VYATAADPKK GSLGTIAPIA IDFIVGANIL AAGPFSGGSM NPARSFGPAV VSGDLSQIWI YWVGPLVGGG LAGLIYGDVF IGSYQEVETR
201: EIRV
Best Arabidopsis Sequence Match ( AT5G47450.1 )
(BLAST)
001: MVKIEVGSVG DSFSVSSLKA YLSEFIATLL FVFAGVGSAV AFAKLTSDGA LDPAGLVAIA IAHAFALFVG VSIAANISGG HLNPAVTLGL AIGGNITLIT
101: GFFYWIAQCL GSIVACLLLV FVTNGKSVPT HGVSAGLGAV EGVVMEIVVT FALVYTVYAT AADPKKGSLG TIAPIAIGFI VGANILAAGP FSGGSMNPAR
201: SFGPAVVSGD LSQIWIYWVG PLVGGALAGL IYGDVFIGSY EAVETREIRV
Arabidopsis Description
TIP2-3Aquaporin TIP2-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGL2]
SUBAcon: [golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.