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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • cytosol 1
  • plasma membrane 4
  • extracellular 1
  • golgi 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra033248.1-P Field mustard cytosol, peroxisome, plasma membrane 98.25 98.25
Bra000974.1-P Field mustard cytosol, peroxisome, plasma membrane 96.5 95.83
Bra014437.1-P Field mustard plasma membrane 94.06 94.06
Bra004950.1-P Field mustard cytosol, peroxisome, plasma membrane 94.06 94.06
Bra007603.1-P Field mustard plasma membrane 93.71 93.71
Bra019307.1-P Field mustard cytosol, peroxisome, plasma membrane 93.01 92.68
VIT_13s0067g00220.t01 Wine grape plasma membrane 88.81 88.81
Solyc01g094690.2.1 Tomato nucleus 88.11 88.42
PGSC0003DMT400000151 Potato cytosol, peroxisome, plasma membrane 88.11 88.42
KRH59918 Soybean peroxisome 87.76 87.46
KRH77555 Soybean plasma membrane 87.41 87.41
KRH27918 Soybean plasma membrane 87.06 87.06
KRH41192 Soybean endoplasmic reticulum 87.41 86.51
PGSC0003DMT400012780 Potato cytosol, peroxisome, plasma membrane 87.06 86.46
PGSC0003DMT400014809 Potato peroxisome 86.71 86.41
Solyc08g008050.2.1 Tomato peroxisome 86.71 86.41
Solyc12g056220.1.1 Tomato plastid 86.71 86.11
KRH66037 Soybean golgi, peroxisome, plasma membrane 85.31 85.92
Bra039301.1-P Field mustard cytosol, peroxisome, plasma membrane 83.92 85.71
Solyc08g081190.2.1 Tomato plastid 85.66 85.66
PGSC0003DMT400032134 Potato cytosol, peroxisome, plasma membrane 85.66 85.66
PGSC0003DMT400053479 Potato plasma membrane 85.66 85.66
Solyc03g096290.2.1 Tomato nucleus 84.62 84.62
KRH00178 Soybean golgi, peroxisome, plasma membrane 82.52 82.23
Bra011585.1-P Field mustard plasma membrane 69.23 70.46
Bra017697.1-P Field mustard cytosol 68.53 69.75
Bra034675.1-P Field mustard cytosol, peroxisome, plasma membrane 68.53 69.75
Bra005216.1-P Field mustard cytosol, golgi, plasma membrane 55.94 69.26
Bra007100.1-P Field mustard plasma membrane 68.53 68.53
Bra003196.1-P Field mustard plasma membrane 68.18 68.18
Bra002462.1-P Field mustard cytosol 61.89 68.08
Bra006997.1-P Field mustard plasma membrane 68.18 67.94
Bra006650.1-P Field mustard plasma membrane 67.48 67.72
Bra020238.1-P Field mustard plasma membrane 66.78 67.49
TraesCS2A01G407700.2 Wheat golgi, peroxisome, plasma membrane 68.18 67.47
Bra023102.1-P Field mustard plasma membrane 66.43 67.14
Bra023103.1-P Field mustard plasma membrane 66.08 66.32
Bra000111.1-P Field mustard plasma membrane 66.08 65.62
KRH75838 Soybean golgi, peroxisome, plasma membrane 82.87 65.29
Bra005215.1-P Field mustard cytosol, peroxisome, plasma membrane 52.8 63.45
Bra027181.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 31.47 36.29
Bra001626.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 31.47 36.14
Bra021171.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 25.87 35.24
Bra022131.1-P Field mustard extracellular 24.83 34.8
Bra026245.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 30.07 34.4
Bra037415.1-P Field mustard cytosol 30.07 34.13
Bra024943.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 29.72 33.86
Bra008079.1-P Field mustard golgi, mitochondrion, plasma membrane 31.47 33.83
Bra034271.1-P Field mustard cytosol, plasma membrane, vacuole 29.37 33.73
Bra032937.1-P Field mustard plasma membrane 29.72 33.6
Bra025947.1-P Field mustard cytosol, golgi, plasma membrane 31.12 33.33
Bra016014.1-P Field mustard cytosol 30.77 33.21
Bra025210.1-P Field mustard plasma membrane 29.37 33.2
Bra017222.1-P Field mustard cytosol 29.02 33.07
Bra031005.1-P Field mustard golgi, mitochondrion, plasma membrane 30.07 32.21
Bra018148.1-P Field mustard extracellular, plasma membrane, plastid 26.22 29.41
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.2InterPro:Aquaporin-likeInterPro:Aquaporin_transptrEnsemblPlantsGene:Bra032644EnsemblPlants:Bra032644.1
EnsemblPlants:Bra032644.1-PGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0015267GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:IPR023271UniProt:M4EV11
InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783ScanProsite:PS00221PANTHER:PTHR19139
PANTHER:PTHR19139:SF202SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelixUniParc:UPI0001B35BD7:
Description
AT1G01620 (E=2e-163) PIP1C, TMP-B, PIP1;3 | PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C); water channel
Coordinates
chrA09:-:36996122..36997186
Molecular Weight (calculated)
30542.2 Da
IEP (calculated)
9.105
GRAVY (calculated)
0.400
Length
286 amino acids
Sequence
(BLAST)
001: MEGKEEDVRV GANKFPERQP IGTSAQSDKD YKEPPPAPLF EPGELSSWSF WRAGIAEFIA TFLFLYITVL TVMGVKRAPN MCASVGIQGI AWAFGGMIFA
101: LVYCTAGISG GHINPAVTFG LFLARKLSLT RAVFYIVMQC LGAVCGAGVV KGFQPSPYQT LGGGANTVAP GYTKGSGLGA EIIGTFVLVY TVFSATDAKR
201: SARDSHVPIL APLPIGFAVF LVHLATIPIT GTGINPARSL GAAIIYNKDH AWDDHWIFWV GPFIGAALAA LYHQLVIRAI PFKTRS
Best Arabidopsis Sequence Match ( AT1G01620.1 )
(BLAST)
001: MEGKEEDVRV GANKFPERQP IGTSAQTDKD YKEPPPAPFF EPGELSSWSF YRAGIAEFIA TFLFLYITVL TVMGVKRAPN MCASVGIQGI AWAFGGMIFA
101: LVYCTAGISG GHINPAVTFG LFLARKLSLT RAVFYIVMQC LGAICGAGVV KGFQPNPYQT LGGGANTVAH GYTKGSGLGA EIIGTFVLVY TVFSATDAKR
201: SARDSHVPIL APLPIGFAVF LVHLATIPIT GTGINPARSL GAAIIYNKDH AWDDHWIFWV GPFIGAALAA LYHQLVIRAI PFKSRS
Arabidopsis Description
PIP1-3TMP-B [Source:UniProtKB/TrEMBL;Acc:A0A178WIA6]
SUBAcon: [golgi,plasma membrane,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.