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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • cytosol 1
  • plasma membrane 4
  • extracellular 1
  • golgi 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY48920 Canola plasma membrane 99.3 99.3
Bra014437.1-P Field mustard plasma membrane 97.2 97.2
AT3G61430.1 Thale cress plasma membrane 96.85 96.85
Bra004950.1-P Field mustard cytosol, peroxisome, plasma membrane 95.1 95.1
Bra032644.1-P Field mustard plasma membrane 93.71 93.71
Bra033248.1-P Field mustard cytosol, peroxisome, plasma membrane 93.36 93.36
Bra000974.1-P Field mustard cytosol, peroxisome, plasma membrane 93.71 93.06
Bra019307.1-P Field mustard cytosol, peroxisome, plasma membrane 89.86 89.55
VIT_13s0067g00220.t01 Wine grape plasma membrane 87.76 87.76
PGSC0003DMT400000151 Potato cytosol, peroxisome, plasma membrane 86.36 86.67
Solyc01g094690.2.1 Tomato nucleus 86.36 86.67
KRH59918 Soybean peroxisome 86.71 86.41
PGSC0003DMT400014809 Potato peroxisome 86.71 86.41
KRH27918 Soybean plasma membrane 86.01 86.01
KRH66037 Soybean golgi, peroxisome, plasma membrane 85.31 85.92
Bra039301.1-P Field mustard cytosol, peroxisome, plasma membrane 83.92 85.71
KRH77555 Soybean plasma membrane 85.66 85.66
KRH41192 Soybean endoplasmic reticulum 86.36 85.47
Solyc08g008050.2.1 Tomato peroxisome 85.66 85.37
PGSC0003DMT400012780 Potato cytosol, peroxisome, plasma membrane 85.31 84.72
Solyc12g056220.1.1 Tomato plastid 84.97 84.38
Solyc08g081190.2.1 Tomato plastid 84.27 84.27
PGSC0003DMT400032134 Potato cytosol, peroxisome, plasma membrane 84.27 84.27
PGSC0003DMT400053479 Potato plasma membrane 83.92 83.92
Solyc03g096290.2.1 Tomato nucleus 82.87 82.87
KRH00178 Soybean golgi, peroxisome, plasma membrane 82.87 82.58
Bra005216.1-P Field mustard cytosol, golgi, plasma membrane 55.94 69.26
Bra011585.1-P Field mustard plasma membrane 66.78 67.97
Bra034675.1-P Field mustard cytosol, peroxisome, plasma membrane 66.08 67.26
Bra023102.1-P Field mustard plasma membrane 66.43 67.14
Bra023103.1-P Field mustard plasma membrane 66.78 67.02
Bra006997.1-P Field mustard plasma membrane 67.13 66.9
Bra017697.1-P Field mustard cytosol 65.38 66.55
Bra002462.1-P Field mustard cytosol 60.14 66.15
Bra007100.1-P Field mustard plasma membrane 66.08 66.08
Bra006650.1-P Field mustard plasma membrane 65.73 65.96
TraesCS2A01G407700.2 Wheat golgi, peroxisome, plasma membrane 66.43 65.74
Bra003196.1-P Field mustard plasma membrane 65.73 65.73
Bra020238.1-P Field mustard plasma membrane 65.03 65.72
KRH75838 Soybean golgi, peroxisome, plasma membrane 82.52 65.01
Bra000111.1-P Field mustard plasma membrane 65.03 64.58
Bra005215.1-P Field mustard cytosol, peroxisome, plasma membrane 52.8 63.45
Bra027181.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 31.12 35.89
Bra001626.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 31.12 35.74
Bra021171.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 25.52 34.76
Bra037415.1-P Field mustard cytosol 30.07 34.13
Bra008079.1-P Field mustard golgi, mitochondrion, plasma membrane 31.47 33.83
Bra022131.1-P Field mustard extracellular 24.13 33.82
Bra025947.1-P Field mustard cytosol, golgi, plasma membrane 31.47 33.71
Bra034271.1-P Field mustard cytosol, plasma membrane, vacuole 29.02 33.33
Bra026245.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 29.02 33.2
Bra016014.1-P Field mustard cytosol 30.42 32.83
Bra032937.1-P Field mustard plasma membrane 29.02 32.81
Bra024943.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 28.67 32.67
Bra017222.1-P Field mustard cytosol 28.67 32.67
Bra031005.1-P Field mustard golgi, mitochondrion, plasma membrane 30.42 32.58
Bra025210.1-P Field mustard plasma membrane 27.97 31.62
Bra018148.1-P Field mustard extracellular, plasma membrane, plastid 26.22 29.41
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.2InterPro:Aquaporin-likeInterPro:Aquaporin_transptrEnsemblPlantsGene:Bra007603EnsemblPlants:Bra007603.1
EnsemblPlants:Bra007603.1-PGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0015267GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:IPR023271UniProt:M4CTQ9
InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783ScanProsite:PS00221PANTHER:PTHR19139
PANTHER:PTHR19139:SF202SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelixUniParc:UPI00025429BB:
Description
AT3G61430 (E=1e-162) PIP1A, ATPIP1, PIP1, PIP1;1 | PIP1A (PLASMA MEMBRANE INTRINSIC PROTEIN 1A); water channel
Coordinates
chrA09:+:29973443..29974826
Molecular Weight (calculated)
30718.3 Da
IEP (calculated)
8.844
GRAVY (calculated)
0.347
Length
286 amino acids
Sequence
(BLAST)
001: MEGKEEDVRV GANKFPERQP IGTSAQSDKD YNEPPPAPLF EPGELSSWSF WRAGIAEFIA TFLFLYITVL TVMGVKRSPN MCSSVGIQGI AWAFGGMIFA
101: LVYCTAGISG GHINPAVTFG LFLARKLSLT RALYYIVMQC WGAICGAGVV KGFQPNQYQA IGGGANTVAP GYTKGSGLGA EIIGTFVLVY TVFSATDAKR
201: NARDSHVPIL APLPIGFAVF LVHLATIPIT GTGINPARSL GAAIIYNKDH SWDDHWVFWV GPFIGAALAA LYHVIVIRAI PFKSRN
Best Arabidopsis Sequence Match ( AT3G61430.2 )
(BLAST)
001: MEGKEEDVRV GANKFPERQP IGTSAQSDKD YKEPPPAPFF EPGELSSWSF WRAGIAEFIA TFLFLYITVL TVMGVKRSPN MCASVGIQGI AWAFGGMIFA
101: LVYCTAGISG GHINPAVTFG LFLARKLSLT RALYYIVMQC LGAICGAGVV KGFQPKQYQA LGGGANTVAH GYTKGSGLGA EIIGTFVLVY TVFSATDAKR
201: NARDSHVPIL APLPIGFAVF LVHLATIPIT GTGINPARSL GAAIIYNKDH SWDDHWVFWV GPFIGAALAA LYHVVVIRAI PFKSRS
Arabidopsis Description
PIP1-1PIP1A [Source:UniProtKB/TrEMBL;Acc:A0A178VIZ0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.