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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 7
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, vacuole
Any Predictor:secretory
BaCelLo:secretory
EpiLoc:vacuole
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:vacuole
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY20190 Canola endoplasmic reticulum, plasma membrane, vacuole 98.57 83.13
CDY63821 Canola endoplasmic reticulum, plasma membrane, vacuole 98.57 83.13
Bra027181.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 94.29 79.84
Bra001626.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 94.29 79.52
Bra022131.1-P Field mustard extracellular 70.0 72.06
Solyc12g044330.1.1 Tomato plastid 81.9 69.35
KRH23420 Soybean plasma membrane, vacuole 79.52 67.61
KRH09912 Soybean endoplasmic reticulum, plasma membrane, vacuole 79.52 67.61
KRG93712 Soybean plasma membrane, vacuole 75.24 66.67
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, plastid, vacuole 76.67 66.26
GSMUA_Achr6P05830_001 Banana endoplasmic reticulum, extracellular, plasma membrane 77.14 66.12
GSMUA_Achr9P28940_001 Banana plasma membrane 76.67 65.71
PGSC0003DMT400006558 Potato endoplasmic reticulum, plasma membrane 76.67 64.66
Os06t0336200-01 Rice nucleus 76.19 64.52
VIT_09s0002g04020.t01 Wine grape plasma membrane, vacuole 76.19 64.26
Solyc06g066560.1.1 Tomato mitochondrion 83.33 64.1
EER89797 Sorghum plasma membrane 73.33 62.1
Bra026245.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 73.81 62.0
TraesCS7B01G243000.1 Wheat plasma membrane 71.9 60.89
HORVU7Hr1G081770.8 Barley plasma membrane 71.9 60.64
Bra024943.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 71.9 60.16
TraesCS7A01G331300.1 Wheat unclear 70.95 60.08
TraesCS7D01G339600.1 Wheat plasma membrane 72.38 54.48
Bra032937.1-P Field mustard plasma membrane 63.81 52.96
Bra017222.1-P Field mustard cytosol 61.9 51.79
Bra025210.1-P Field mustard plasma membrane 62.38 51.78
Bra037415.1-P Field mustard cytosol 59.52 49.6
Bra034271.1-P Field mustard cytosol, plasma membrane, vacuole 52.86 44.58
Bra016014.1-P Field mustard cytosol 54.29 43.02
Bra008079.1-P Field mustard golgi, mitochondrion, plasma membrane 54.29 42.86
Bra031005.1-P Field mustard golgi, mitochondrion, plasma membrane 51.43 40.45
Bra025947.1-P Field mustard cytosol, golgi, plasma membrane 50.95 40.07
Bra018148.1-P Field mustard extracellular, plasma membrane, plastid 41.9 34.51
Bra005216.1-P Field mustard cytosol, golgi, plasma membrane 37.14 33.77
Bra002462.1-P Field mustard cytosol 38.1 30.77
Bra020238.1-P Field mustard plasma membrane 40.0 29.68
Bra006650.1-P Field mustard plasma membrane 39.52 29.12
Bra000111.1-P Field mustard plasma membrane 39.05 28.47
Bra017697.1-P Field mustard cytosol 38.1 28.47
Bra011585.1-P Field mustard plasma membrane 38.1 28.47
Bra023102.1-P Field mustard plasma membrane 38.1 28.27
Bra034675.1-P Field mustard cytosol, peroxisome, plasma membrane 37.62 28.11
Bra023103.1-P Field mustard plasma membrane 38.1 28.07
Bra003196.1-P Field mustard plasma membrane 37.62 27.62
Bra006997.1-P Field mustard plasma membrane 37.62 27.53
Bra007100.1-P Field mustard plasma membrane 37.14 27.27
Bra000974.1-P Field mustard cytosol, peroxisome, plasma membrane 36.19 26.39
Bra004950.1-P Field mustard cytosol, peroxisome, plasma membrane 35.71 26.22
Bra032644.1-P Field mustard plasma membrane 35.24 25.87
Bra019307.1-P Field mustard cytosol, peroxisome, plasma membrane 35.24 25.78
Bra005215.1-P Field mustard cytosol, peroxisome, plasma membrane 29.05 25.63
Bra007603.1-P Field mustard plasma membrane 34.76 25.52
Bra014437.1-P Field mustard plasma membrane 34.76 25.52
Bra033248.1-P Field mustard cytosol, peroxisome, plasma membrane 34.76 25.52
Bra039301.1-P Field mustard cytosol, peroxisome, plasma membrane 30.0 22.5
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.3InterPro:Aquaporin-likeInterPro:Aquaporin_transptrEnsemblPlantsGene:Bra021171EnsemblPlants:Bra021171.1
EnsemblPlants:Bra021171.1-PGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0015267GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:IPR023271UniProt:M4DXC5
InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783ScanProsite:PS00221PANTHER:PTHR19139
PANTHER:PTHR19139:SF257SUPFAM:SSF81338TMHMM:TMhelixUniParc:UPI0002543BCASEG:seg:
Description
AT3G16240 (E=2e-100) DELTA-TIP, TIP2;1, DELTA-TIP1, AQP1, ATTIP2;1 | DELTA-TIP; ammonia transporter/ methylammonium transmembrane transporter/ water channel
Coordinates
chrA01:-:23594889..23596039
Molecular Weight (calculated)
20980.8 Da
IEP (calculated)
6.059
GRAVY (calculated)
0.973
Length
210 amino acids
Sequence
(BLAST)
001: MYIAKLTSDA ALDTPGLVAI AVCHGFALFV AVAIGANISG GHVNPAVTFG LALGGQITLI TGVFYWIAQL LGSTAACFLL KFVTGGLAVP THSVAAGVGA
101: IEGVVMEIII TFALVYTVYA TAADPKKGSL GTIAPLAIGL IVGANILAAG PFSGGSMNPA RSFGPAVAAG DFSGPWVYWV GPLIGGGLAG LVYGNVFMPS
201: SEHVPLASEF
Best Arabidopsis Sequence Match ( AT3G16240.1 )
(BLAST)
001: MAGVAFGSFD DSFSLASLRA YLAEFISTLL FVFAGVGSAI AYAKLTSDAA LDTPGLVAIA VCHGFALFVA VAIGANISGG HVNPAVTFGL AVGGQITVIT
101: GVFYWIAQLL GSTAACFLLK YVTGGLAVPT HSVAAGLGSI EGVVMEIIIT FALVYTVYAT AADPKKGSLG TIAPLAIGLI VGANILAAGP FSGGSMNPAR
201: SFGPAVAAGD FSGHWVYWVG PLIGGGLAGL IYGNVFMGSS EHVPLASADF
Arabidopsis Description
TIP2-1Aquaporin TIP2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q41951]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.