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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • cytosol 1
  • plasma membrane 4
  • extracellular 1
  • golgi 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY09192 Canola plasma membrane 89.75 98.07
Bra006650.1-P Field mustard plasma membrane 97.17 96.49
Bra002462.1-P Field mustard cytosol 86.22 93.85
AT5G60660.1 Thale cress plasma membrane 90.81 88.32
Bra023102.1-P Field mustard plasma membrane 82.69 82.69
Bra005216.1-P Field mustard cytosol, golgi, plasma membrane 66.78 81.82
Bra023103.1-P Field mustard plasma membrane 82.33 81.75
Bra006997.1-P Field mustard plasma membrane 82.33 81.18
Bra005215.1-P Field mustard cytosol, peroxisome, plasma membrane 68.2 81.09
Bra017697.1-P Field mustard cytosol 77.39 77.94
Bra011585.1-P Field mustard plasma membrane 76.68 77.22
Bra034675.1-P Field mustard cytosol, peroxisome, plasma membrane 75.97 76.51
Bra000111.1-P Field mustard plasma membrane 75.97 74.65
Bra007100.1-P Field mustard plasma membrane 74.91 74.13
Bra003196.1-P Field mustard plasma membrane 74.91 74.13
TraesCS5B01G332500.1 Wheat plasma membrane 69.96 68.04
TraesCS5A01G332300.1 Wheat plasma membrane 69.96 68.04
TraesCS5D01G338200.1 Wheat plasma membrane 69.96 68.04
Zm00001d022608_P001 Maize plasma membrane 68.9 67.71
Bra019307.1-P Field mustard cytosol, peroxisome, plasma membrane 67.84 66.9
Bra032644.1-P Field mustard plasma membrane 67.49 66.78
Os09t0541000-01 Rice cytosol, plasma membrane, vacuole 68.2 66.55
Bra033248.1-P Field mustard cytosol, peroxisome, plasma membrane 66.78 66.08
Bra000974.1-P Field mustard cytosol, peroxisome, plasma membrane 66.43 65.28
Bra004950.1-P Field mustard cytosol, peroxisome, plasma membrane 65.72 65.03
Bra007603.1-P Field mustard plasma membrane 65.72 65.03
Bra014437.1-P Field mustard plasma membrane 65.37 64.69
HORVU5Hr1G084230.1 Barley extracellular, golgi, mitochondrion 70.32 63.99
Bra039301.1-P Field mustard cytosol, peroxisome, plasma membrane 57.95 58.57
TraesCS7B01G096000.1 Wheat golgi, peroxisome, plasma membrane 61.84 57.57
TraesCS4A01G286200.1 Wheat golgi, peroxisome, plasma membrane 61.48 57.24
TraesCS7A01G191200.1 Wheat golgi, peroxisome, plasma membrane 61.48 57.24
TraesCS7D01G192200.1 Wheat golgi, peroxisome, plasma membrane 61.13 56.91
TraesCS4B01G027600.1 Wheat plasma membrane 54.77 53.26
HORVU7Hr1G038940.1 Barley golgi 35.34 49.02
KXG36091 Sorghum cytosol, peroxisome, plasma membrane 55.83 48.47
Bra021171.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 29.68 40.0
Bra027181.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 34.63 39.52
Bra001626.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 34.63 39.36
Bra022131.1-P Field mustard extracellular 27.21 37.75
Bra037415.1-P Field mustard cytosol 32.86 36.9
Bra032937.1-P Field mustard plasma membrane 32.86 36.76
Bra025210.1-P Field mustard plasma membrane 32.86 36.76
Bra026245.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 32.16 36.4
Bra024943.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 32.16 36.26
Bra017222.1-P Field mustard cytosol 31.1 35.06
Bra008079.1-P Field mustard golgi, mitochondrion, plasma membrane 31.8 33.83
Bra034271.1-P Field mustard cytosol, plasma membrane, vacuole 29.33 33.33
Bra025947.1-P Field mustard cytosol, golgi, plasma membrane 30.74 32.58
Bra016014.1-P Field mustard cytosol 30.04 32.08
Bra031005.1-P Field mustard golgi, mitochondrion, plasma membrane 29.68 31.46
Bra018148.1-P Field mustard extracellular, plasma membrane, plastid 25.8 28.63
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.2InterPro:Aquaporin-likeInterPro:Aquaporin_transptrEnsemblPlantsGene:Bra020238EnsemblPlants:Bra020238.1
EnsemblPlants:Bra020238.1-PGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0015267GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:IPR023271UniProt:M4DUP5
InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783ScanProsite:PS00221PANTHER:PTHR19139
PANTHER:PTHR19139:SF260SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelixUniParc:UPI0002543579:
Description
AT5G60660 (E=2e-146) PIP2F, PIP2;4 | PIP2;4 (PLASMA MEMBRANE INTRINSIC PROTEIN 2;4); water channel
Coordinates
chrA02:+:5792058..5793485
Molecular Weight (calculated)
29975.5 Da
IEP (calculated)
8.184
GRAVY (calculated)
0.474
Length
283 amino acids
Sequence
(BLAST)
001: MAKDLEVQEG RAARDYQDPP PAPLFDMEEL GKWSLYRAVI AEFVATLLFL YVSILTVIGY KAQTDASAGG ADCGGVGILG IAWAFGGMIF VLVYCTAGIS
101: GGHINPAVTF GLFLARKVSL VRTVLYIVAQ CLGAICGCGL VKAFQSSYYN RYGGGANQLA EGYNKGTGLG AEIIGTFVLV YPVFAATDPK RSARDSHIPV
201: LAPLPIGFAA FMVHLATIPI TGTGINPARS FGAAVIYNQE KAWDDQWIFW VGPMIGAAAA ALYHQFVLRA AGIKSLGSFR SSA
Best Arabidopsis Sequence Match ( AT5G60660.1 )
(BLAST)
001: MAKDLDVNES GPPAARDYKD PPPAPFFDME ELRKWPLYRA VIAEFVATLL FLYVSILTVI GYKAQTDATA GGVDCGGVGI LGIAWAFGGM IFVLVYCTAG
101: ISGGHINPAV TVGLFLARKV SLVRTVLYIV AQCLGAICGC GFVKAFQSSY YTRYGGGANE LADGYNKGTG LGAEIIGTFV LVYTVFSATD PKRNARDSHV
201: PVLAPLPIGF AVFMVHLATI PITGTGINPA RSFGAAVIYN NEKAWDDQWI FWVGPMIGAA AAAFYHQFIL RAAAIKALGS FGSFGSFRSF A
Arabidopsis Description
PIP2-4PIP2F [Source:UniProtKB/TrEMBL;Acc:A0A178UG45]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.