Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G191200.1 | Wheat | golgi, peroxisome, plasma membrane | 90.13 | 90.13 |
| TraesCS4B01G027600.1 | Wheat | plasma membrane | 82.57 | 86.25 |
| HORVU7Hr1G038940.1 | Barley | golgi | 54.28 | 80.88 |
| Os09t0541000-01 | Rice | cytosol, plasma membrane, vacuole | 65.13 | 68.28 |
| Zm00001d022608_P001 | Maize | plasma membrane | 63.82 | 67.36 |
| TraesCS5A01G332300.1 | Wheat | plasma membrane | 61.84 | 64.6 |
| TraesCS2A01G065700.1 | Wheat | golgi | 58.22 | 62.32 |
| Bra002462.1-P | Field mustard | cytosol | 53.29 | 62.31 |
| CDY31523 | Canola | plasma membrane | 52.96 | 61.92 |
| Bra020238.1-P | Field mustard | plasma membrane | 57.24 | 61.48 |
| CDY09192 | Canola | plasma membrane | 52.3 | 61.39 |
| Bra006650.1-P | Field mustard | plasma membrane | 57.24 | 61.05 |
| CDY53629 | Canola | cytosol | 51.97 | 61.0 |
| CDX88767 | Canola | plasma membrane | 51.97 | 60.77 |
| CDX71032 | Canola | plasma membrane | 51.64 | 60.38 |
| TraesCS5A01G100000.1 | Wheat | plasma membrane | 56.58 | 60.14 |
| TraesCS2A01G379800.1 | Wheat | plasma membrane | 56.91 | 59.66 |
| TraesCS6A01G222100.1 | Wheat | golgi, peroxisome, plasma membrane | 55.92 | 59.44 |
| TraesCS2A01G198500.1 | Wheat | plasma membrane | 56.58 | 59.31 |
| TraesCS2A01G379900.1 | Wheat | plasma membrane | 56.58 | 59.31 |
| AT5G60660.1 | Thale cress | plasma membrane | 55.59 | 58.08 |
| TraesCS5A01G530600.1 | Wheat | golgi, peroxisome, plasma membrane | 52.96 | 55.14 |
| TraesCS5A01G181000.1 | Wheat | plastid | 51.64 | 54.14 |
| TraesCS6A01G082900.1 | Wheat | golgi, peroxisome, plasma membrane | 52.3 | 53.9 |
| TraesCS6A01G245100.1 | Wheat | golgi, peroxisome, plasma membrane | 50.66 | 53.1 |
| TraesCS6A01G405700.1 | Wheat | golgi | 50.99 | 53.08 |
| TraesCS6A01G405600.1 | Wheat | plasma membrane | 50.99 | 53.08 |
| TraesCS4A01G312700.1 | Wheat | plasma membrane | 50.0 | 52.23 |
| KXG36091 | Sorghum | cytosol, peroxisome, plasma membrane | 49.67 | 46.32 |
| TraesCS2A01G407700.2 | Wheat | golgi, peroxisome, plasma membrane | 37.17 | 39.1 |
| TraesCS3A01G535300.1 | Wheat | plasma membrane | 25.66 | 30.95 |
| TraesCS5A01G518300.1 | Wheat | golgi, plasma membrane, vacuole | 25.0 | 29.69 |
| TraesCS2A01G414100.1 | Wheat | plasma membrane | 24.01 | 29.44 |
| TraesCS6A01G250300.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 23.68 | 28.92 |
| TraesCS2A01G374400.1 | Wheat | plasma membrane | 25.0 | 28.68 |
| TraesCS3A01G434600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 22.04 | 28.27 |
| TraesCS7A01G331300.1 | Wheat | unclear | 23.03 | 28.23 |
| TraesCS4A01G410800.1 | Wheat | golgi, plasma membrane, vacuole | 23.03 | 28.0 |
| TraesCS3A01G155800.1 | Wheat | plasma membrane | 22.7 | 27.82 |
| TraesCS1A01G165400.1 | Wheat | golgi, mitochondrion, plasma membrane, plastid | 23.68 | 27.38 |
| TraesCS2A01G414200.1 | Wheat | plastid | 22.7 | 26.34 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.2 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0055085 |
| InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 |
| PANTHER:PTHR19139 | PANTHER:PTHR19139:SF160 | SUPFAM:SSF81338 | TIGRFAMs:TIGR00861 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS4A01G286200 |
| EnsemblPlants:TraesCS4A01G286200.1 | TIGR:cd00333 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr4A:+:591861715..591862961
Molecular Weight (calculated)
31759.4 Da
IEP (calculated)
8.205
GRAVY (calculated)
0.480
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MPQTTIAAKE VEKVVTADEE TTDIVVHRVP YGDPPAVRAL DTSELGTWSL YRALIGEFTA SLILLYVSIA TVIGYRNQSS AADERCTGVG YLGVAWSFGA
101: TVSVLVYSTS GVSGGHINPA VTFALFMAGK VTLVRAVLYV AAQCLGAVVG VGVVKGIMKH PYDDLGGGAN AVAGGYSLGA ALGAETLGTF VLAYAVFSAT
201: DPKRTARDAF VPLVAALPIG MAVFVVHLAT IPITGTGINP ARSLGAAVLY NQHETWKQHW IFWVGPFTGA AMAAFYHKIV LRDGAVVKES LAAMGSFKRN
301: SSTA
101: TVSVLVYSTS GVSGGHINPA VTFALFMAGK VTLVRAVLYV AAQCLGAVVG VGVVKGIMKH PYDDLGGGAN AVAGGYSLGA ALGAETLGTF VLAYAVFSAT
201: DPKRTARDAF VPLVAALPIG MAVFVVHLAT IPITGTGINP ARSLGAAVLY NQHETWKQHW IFWVGPFTGA AMAAFYHKIV LRDGAVVKES LAAMGSFKRN
301: SSTA
001: MSKEVSEEGR HGKDYVDPPP APLLDMAELK LWSFYRAIIA EFIATLLFLY VTVATVIGHK NQTGPCGGVG LLGIAWAFGG MIFVLVYCTA GISGGHINPA
101: VTFGLFLARK VSLPRAVAYM VAQCLGAICG VGLVKAFMMT PYKRLGGGAN TVADGYSTGT ALGAEIIGTF VLVYTVFSAT DPKRSARDSH VPVLAPLPIG
201: FAVFMVHLAT IPITGTGINP ARSFGAAVIY NNEKAWDDHW IFWVGPFVGA LAAAAYHQYI LRAAAIKALA SFRSNPTN
101: VTFGLFLARK VSLPRAVAYM VAQCLGAICG VGLVKAFMMT PYKRLGGGAN TVADGYSTGT ALGAEIIGTF VLVYTVFSAT DPKRSARDSH VPVLAPLPIG
201: FAVFMVHLAT IPITGTGINP ARSFGAAVIY NNEKAWDDHW IFWVGPFVGA LAAAAYHQYI LRAAAIKALA SFRSNPTN
Arabidopsis Description
PIP2-8Probable aquaporin PIP2-8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVX8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.