Skip to main content
crop-pal logo
Wheat
Search for another protein from :
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, plasma membrane
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G346700.1
TraesCS2B01G365000.1
TraesCS2D01G345400.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G25810.1 TraesCS2A01G346700.1 AT1G27300.1 21798944
AT2G25810.1 TraesCS2B01G365000.1 AT1G27300.1 21798944
AT2G25810.1 TraesCS2D01G345400.1 AT1G27300.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G182400.1 Wheat plasma membrane 100.0 100.0
Zm00001d039713_P001 Maize plasma membrane 69.76 69.48
Os01t0232100-01 Rice cytosol, endoplasmic reticulum, extracellular 70.97 68.75
KXG31483 Sorghum extracellular, golgi, plasma membrane 68.95 67.59
TraesCS3A01G434600.1 Wheat endoplasmic reticulum, extracellular, vacuole 60.48 63.29
GSMUA_Achr10P... Banana cytosol, plasma membrane, vacuole 61.29 61.04
TraesCS5A01G518300.1 Wheat golgi, plasma membrane, vacuole 59.68 57.81
AT2G25810.1 Thale cress cytosol, golgi, plasma membrane 56.85 56.63
KRH62059 Soybean cytosol, plasma membrane, vacuole 56.05 56.5
KRH52727 Soybean cytosol 55.24 55.69
CDX77009 Canola cytosol, plasma membrane, vacuole 55.65 55.42
Bra034271.1-P Field mustard cytosol, plasma membrane, vacuole 55.24 55.02
PGSC0003DMT400024847 Potato extracellular, plasma membrane, vacuole 54.44 54.66
CDY35336 Canola extracellular 31.45 54.55
HORVU3Hr1G031680.1 Barley vacuole 58.87 54.48
Solyc08g066840.2.1 Tomato endoplasmic reticulum, plasma membrane 53.63 53.85
GSMUA_Achr1P13800_001 Banana cytosol 51.21 50.0
GSMUA_Achr9P06260_001 Banana cytosol, golgi, plasma membrane 50.4 49.02
TraesCS4A01G410800.1 Wheat golgi, plasma membrane, vacuole 47.98 47.6
VIT_04s0008g03550.t01 Wine grape plasma membrane 56.45 46.51
TraesCS6A01G250300.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 46.37 46.18
TraesCS3A01G535300.1 Wheat plasma membrane 46.77 46.03
TraesCS2A01G414100.1 Wheat plasma membrane 45.56 45.56
TraesCS7A01G331300.1 Wheat unclear 41.53 41.53
TraesCS1A01G165400.1 Wheat golgi, mitochondrion, plasma membrane, plastid 42.74 40.3
TraesCS2A01G374400.1 Wheat plasma membrane 39.52 36.98
TraesCS2A01G414200.1 Wheat plastid 35.89 33.97
TraesCS2A01G065700.1 Wheat golgi 30.65 26.76
TraesCS6A01G222100.1 Wheat golgi, peroxisome, plasma membrane 30.65 26.57
TraesCS2A01G198500.1 Wheat plasma membrane 31.05 26.55
TraesCS2A01G379900.1 Wheat plasma membrane 31.05 26.55
TraesCS5A01G332300.1 Wheat plasma membrane 31.05 26.46
TraesCS5A01G100000.1 Wheat plasma membrane 30.24 26.22
TraesCS5A01G530600.1 Wheat golgi, peroxisome, plasma membrane 30.65 26.03
TraesCS2A01G379800.1 Wheat plasma membrane 29.84 25.52
TraesCS4A01G312700.1 Wheat plasma membrane 29.44 25.09
TraesCS5A01G181000.1 Wheat plastid 29.03 24.83
TraesCS6A01G405600.1 Wheat plasma membrane 29.03 24.66
TraesCS6A01G405700.1 Wheat golgi 29.03 24.66
TraesCS6A01G082900.1 Wheat golgi, peroxisome, plasma membrane 28.63 24.07
TraesCS6A01G245100.1 Wheat golgi, peroxisome, plasma membrane 27.42 23.45
TraesCS7A01G191200.1 Wheat golgi, peroxisome, plasma membrane 28.63 23.36
TraesCS4A01G286200.1 Wheat golgi, peroxisome, plasma membrane 27.82 22.7
TraesCS2A01G407700.2 Wheat golgi, peroxisome, plasma membrane 20.97 17.99
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.3InterPro:Aquaporin-likeInterPro:Aquaporin_transptrncoils:CoilGO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020
GO:GO:0055085InterPro:IPR023271InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783
ScanProsite:PS00221PANTHER:PTHR19139PANTHER:PTHR19139:SF165SUPFAM:SSF81338TMHMM:TMhelixEnsemblPlantsGene:TraesCS3A01G155800
EnsemblPlants:TraesCS3A01G155800.1SEG:seg::::
Description
No Description!
Coordinates
chr3A:+:149564270..149565903
Molecular Weight (calculated)
24925.8 Da
IEP (calculated)
7.743
GRAVY (calculated)
0.937
Length
248 amino acids
Sequence
(BLAST)
001: MPKIALGHRR EASDPGCLRA VLGELVLTFL FVFVGVGSAI VGGQAVAAGG DTSAALIAVA LGHALVVAVF ATAGFHISGA HMNPAVTLSL AVGGHITLIR
101: AGFFVLAQML GSSLACILLR ALTGGLVTPV HALAAGVGPI QGVVAEVVFT FTLLFTIYAA ILDPKSSAPG FGPLLTGLLV GANTIAGGAL TGASMNPARS
201: FGPALASGNW ANHWVYWVGP LAGGPLAVAV YEFIFTVPAT HQQLPTVE
Best Arabidopsis Sequence Match ( AT2G25810.1 )
(BLAST)
001: MKKIELGHHS EAAKPDCIKA LIVEFITTFL FVFAGVGSAM ATDSLVGNTL VGLFAVAVAH AFVVAVMISA GHISGGHLNP AVTLGLLLGG HISVFRAFLY
101: WIDQLLASSA ACFLLSYLTG GMGTPVHTLA SGVSYTQGII WEIILTFSLL FTVYATIVDP KKGSLDGFGP LLTGFVVGAN ILAGGAFSGA SMNPARSFGP
201: ALVSGNWTDH WVYWVGPLIG GGLAGFIYEN VLIDRPHVPV ADDEQPLLN
Arabidopsis Description
TIP4-1Aquaporin TIP4-1 [Source:UniProtKB/Swiss-Prot;Acc:O82316]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.