Factsheet for Os01t0232100-01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, cytosol

Predictor Summary:

nucleus 1
plastid 1
endoplasmic reticulum 2
vacuole 2
extracellular 2
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0509600-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G25810.1	Os02t0509600-01	AT1G27300.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G182400.1	Wheat	plasma membrane	68.75	70.97
TraesCS3A01G155800.1	Wheat	plasma membrane	68.75	70.97
Zm00001d039713_P001	Maize	plasma membrane	68.75	70.68
KXG31483	Sorghum	extracellular, golgi, plasma membrane	69.14	69.96
Os01t0232000-00	Rice	cytosol, endoplasmic reticulum, plasma membrane	63.67	64.94
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, vacuole	58.98	60.64
KRH52727	Soybean	cytosol	53.52	55.69
KRH62059	Soybean	cytosol, plasma membrane, vacuole	53.12	55.28
AT2G25810.1	Thale cress	cytosol, golgi, plasma membrane	52.34	53.82
GSMUA_Achr1P13800_001	Banana	cytosol	52.73	53.15
PGSC0003DMT400024847	Potato	extracellular, plasma membrane, vacuole	51.17	53.04
Solyc08g066840.2.1	Tomato	endoplasmic reticulum, plasma membrane	50.39	52.23
Bra034271.1-P	Field mustard	cytosol, plasma membrane, vacuole	50.39	51.81
CDX77009	Canola	cytosol, plasma membrane, vacuole	50.39	51.81
CDY35336	Canola	extracellular	28.52	51.05
GSMUA_Achr9P06260_001	Banana	cytosol, golgi, plasma membrane	50.39	50.59
Os05t0231700-01	Rice	golgi, mitochondrion, plasma membrane	60.94	49.68
Os02t0658100-01	Rice	vacuole	38.28	47.57
Os03t0146100-01	Rice	nucleus	44.92	46.0
VIT_04s0008g03550.t01	Wine grape	plasma membrane	51.95	44.19
Os04t0550900-00	Rice	endoplasmic reticulum, extracellular, vacuole	23.44	42.25
HORVU3Hr1G031680.1	Barley	vacuole	42.58	40.67
Os10t0492600-01	Rice	plastid	41.8	40.53
Os06t0336200-01	Rice	nucleus	38.28	39.52
Os04t0527900-01	Rice	plastid	37.5	36.23
Os04t0550800-01	Rice	endoplasmic reticulum, plasma membrane	35.94	34.2
Os03t0861300-01	Rice	cytosol, peroxisome, plasma membrane	32.03	29.29
Os07t0448800-01	Rice	plasma membrane	32.03	28.28
Os07t0448100-01	Rice	plasma membrane	31.25	27.97
Os04t0521100-01	Rice	plasma membrane	31.25	27.59
Os07t0448400-01	Rice	plasma membrane	14.06	26.67
Os02t0629200-02	Rice	plasma membrane	29.69	26.39
Os09t0541000-01	Rice	cytosol, plasma membrane, vacuole	29.3	25.86
Os07t0448200-00	Rice	mitochondrion, nucleus, plastid	26.95	24.91
Os04t0233400-01	Rice	plasma membrane	27.34	24.82
Os04t0559700-01	Rice	plasma membrane	26.95	23.96
Os02t0666200-01	Rice	plasma membrane	26.56	23.53
Os10t0481100-01	Rice	plasma membrane	7.03	19.35

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.3	EntrezGene:4324277	EMBL:AK069592	EMBL:AK099190	InterPro:Aquaporin-like
InterPro:Aquaporin_transptr	ProteinID:BAA92993.1	ProteinID:BAF04415.1	ProteinID:BAS71182.1	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774
GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006833	GO:GO:0008150	GO:GO:0009705
GO:GO:0015250	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0042807
GO:GO:0055085	InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS	EnsemblPlantsGene:Os01g0232100	EnsemblPlants:Os01t0232100-01
PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF165	UniProt:Q9LWR0
SUPFAM:SSF81338	TMHMM:TMhelix	UniParc:UPI0000DD8A26	RefSeq:XP_015633962.1	SEG:seg	:

Description

TONOPLAST INTRINSIC PROTEIN 4;2Similar to Tonoplast membrane integral protein ZmTIP4-3. (Os01t0232100-01)

Coordinates

chr1:+:7302563..7303771

Molecular Weight (calculated)

25600.4 Da

IEP (calculated)

6.290

GRAVY (calculated)

0.750

Length

256 amino acids

Sequence
(BLAST)

001: MPLLPMTKLE LGHRGEAWEP GCLRAVAGEL LFTFLFVFIG VASTITAGKA AGGAGEAAAV TAAAMAQALV VAVLATAGFH VSGGHLNPAV TLSLAVGGHI
101: TLFRSALYVA AQLAGSSLAC LLLRCLTGGA ATPVHALADG VGPVQGVAAE AVFTFTLLLV ICATILDPRR AAPPGTGPLL TGLLVGANTV AGGALTGASM
201: NPARSFGPAL ATGEWAHHWV YWVGPLAGGP LAVVAYELLF MDVEDAGGAH QPLPQE

Best Arabidopsis Sequence Match ( AT2G25810.1 )
(BLAST)

001: MKKIELGHHS EAAKPDCIKA LIVEFITTFL FVFAGVGSAM ATDSLVGNTL VGLFAVAVAH AFVVAVMISA GHISGGHLNP AVTLGLLLGG HISVFRAFLY
101: WIDQLLASSA ACFLLSYLTG GMGTPVHTLA SGVSYTQGII WEIILTFSLL FTVYATIVDP KKGSLDGFGP LLTGFVVGAN ILAGGAFSGA SMNPARSFGP
201: ALVSGNWTDH WVYWVGPLIG GGLAGFIYEN VLIDRPHVPV ADDEQPLLN

Arabidopsis Description

TIP4-1Aquaporin TIP4-1 [Source:UniProtKB/Swiss-Prot;Acc:O82316]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.