Factsheet for Os01t0232000-00

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:

nucleus 1
plastid 1
endoplasmic reticulum 2
vacuole 2
extracellular 1
plasma membrane 2
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0509600-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G25810.1	Os02t0509600-01	AT1G27300.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02191	Sorghum	cytosol	81.67	81.35
TraesCS3D01G163400.1	Wheat	endoplasmic reticulum, extracellular, vacuole	77.29	78.86
TraesCS3A01G434600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	74.1	78.48
TraesCS3B01G182200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	78.09	78.09
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, vacuole	73.31	73.9
Zm00001d039293_P001	Maize	plastid	82.47	72.13
KRH62059	Soybean	cytosol, plasma membrane, vacuole	62.95	64.23
Os01t0232100-01	Rice	cytosol, endoplasmic reticulum, extracellular	64.94	63.67
KRH52727	Soybean	cytosol	61.75	63.01
PGSC0003DMT400024847	Potato	extracellular, plasma membrane, vacuole	59.36	60.32
Bra034271.1-P	Field mustard	cytosol, plasma membrane, vacuole	59.36	59.84
AT2G25810.1	Thale cress	cytosol, golgi, plasma membrane	59.36	59.84
CDX77009	Canola	cytosol, plasma membrane, vacuole	59.36	59.84
Solyc08g066840.2.1	Tomato	endoplasmic reticulum, plasma membrane	58.57	59.51
GSMUA_Achr9P06260_001	Banana	cytosol, golgi, plasma membrane	57.77	56.86
HORVU3Hr1G031620.5	Barley	nucleus, peroxisome, plastid	69.72	55.03
CDY35336	Canola	extracellular	30.68	53.85
Os02t0658100-01	Rice	vacuole	43.43	52.91
GSMUA_Achr1P13800_001	Banana	cytosol	53.39	52.76
Os03t0146100-01	Rice	nucleus	51.39	51.6
VIT_04s0008g03550.t01	Wine grape	plasma membrane	58.96	49.17
Os05t0231700-01	Rice	golgi, mitochondrion, plasma membrane	60.56	48.41
Os06t0336200-01	Rice	nucleus	47.01	47.58
Os04t0550900-00	Rice	endoplasmic reticulum, extracellular, vacuole	26.29	46.48
Os10t0492600-01	Rice	plastid	47.81	45.45
Os04t0527900-01	Rice	plastid	45.02	42.64
Os04t0550800-01	Rice	endoplasmic reticulum, plasma membrane	39.04	36.43
Os07t0448100-01	Rice	plasma membrane	34.26	30.07
Os04t0521100-01	Rice	plasma membrane	33.47	28.97
Os07t0448400-01	Rice	plasma membrane	15.54	28.89
Os09t0541000-01	Rice	cytosol, plasma membrane, vacuole	33.07	28.62
Os03t0861300-01	Rice	cytosol, peroxisome, plasma membrane	31.47	28.21
Os07t0448800-01	Rice	plasma membrane	32.27	27.93
Os04t0559700-01	Rice	plasma membrane	31.87	27.78
Os02t0629200-02	Rice	plasma membrane	31.87	27.78
Os04t0233400-01	Rice	plasma membrane	30.68	27.3
Os07t0448200-00	Rice	mitochondrion, nucleus, plastid	29.88	27.08
Os02t0666200-01	Rice	plasma membrane	30.68	26.64
Os10t0481100-01	Rice	plasma membrane	8.76	23.66

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.3	EntrezGene:4324276	EMBL:AK069192	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr
ProteinID:BAA92991.1	ProteinID:BAF04414.1	ProteinID:BAS71180.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0005886
GO:GO:0005887	GO:GO:0006810	GO:GO:0006833	GO:GO:0008150	GO:GO:0009705	GO:GO:0015250
GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0042807	GO:GO:0055085
InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS	EnsemblPlantsGene:Os01g0232000	EnsemblPlants:Os01t0232000-00	PFAM:PF00230
PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF186	UniProt:Q9LWR2	SUPFAM:SSF81338
TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI000009DB2D	RefSeq:XP_015621438.1	SEG:seg	:

Description

TONOPLAST INTRINSIC PROTEIN 4;3Major intrinsic protein family protein. (Os01t0232000-00)

Coordinates

chr1:+:7297781..7298619

Molecular Weight (calculated)

25054.8 Da

IEP (calculated)

6.794

GRAVY (calculated)

0.758

Length

251 amino acids

Sequence
(BLAST)

001: MAKLALGHHR EATDPGCLRA VVAELLLTFL FVFSGVGSAM AAAKLGGGGD TIMGLTAVAA AHALVVAVMV SAGLHVSGGH INPAVTLGLA AGGHITLFRS
101: ALYAAAQLLG SSLACLLLAA LTGGEEAVPV HAPAPGVGAA RAVAMEAVLT FSLLFAVYAT VVDRRRAVGA LGPLLVGLVV GANILAGGPY SGASMNPARS
201: FGPALAAGEW ADHWIYWVGP LIGGPLAGLV YEGLFMGPPG HEPLPRNDGD F

Best Arabidopsis Sequence Match ( AT2G25810.1 )
(BLAST)

001: MKKIELGHHS EAAKPDCIKA LIVEFITTFL FVFAGVGSAM ATDSLVGNTL VGLFAVAVAH AFVVAVMISA GHISGGHLNP AVTLGLLLGG HISVFRAFLY
101: WIDQLLASSA ACFLLSYLTG GMGTPVHTLA SGVSYTQGII WEIILTFSLL FTVYATIVDP KKGSLDGFGP LLTGFVVGAN ILAGGAFSGA SMNPARSFGP
201: ALVSGNWTDH WVYWVGPLIG GGLAGFIYEN VLIDRPHVPV ADDEQPLLN

Arabidopsis Description

TIP4-1Aquaporin TIP4-1 [Source:UniProtKB/Swiss-Prot;Acc:O82316]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.