Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- vacuole 3
- cytosol 2
- extracellular 1
- golgi 1
- plasma membrane 2
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G25810.1 | KRG97393 | AT1G27300.1 | 21798944 |
| AT2G25810.1 | KRH31520 | AT1G27300.1 | 21798944 |
| AT2G25810.1 | KRH76090 | AT1G27300.1 | 21798944 |
| AT2G25810.1 | KRH22653 | AT5G22290.1 | 21798944 |
| AT2G25810.1 | KRH26664 | AT5G22290.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH62059 | Soybean | cytosol, plasma membrane, vacuole | 97.15 | 97.15 |
| CDX77009 | Canola | cytosol, plasma membrane, vacuole | 77.24 | 76.31 |
| Bra034271.1-P | Field mustard | cytosol, plasma membrane, vacuole | 76.83 | 75.9 |
| CDY35336 | Canola | extracellular | 43.9 | 75.52 |
| AT2G25810.1 | Thale cress | cytosol, golgi, plasma membrane | 76.42 | 75.5 |
| PGSC0003DMT400024847 | Potato | extracellular, plasma membrane, vacuole | 74.39 | 74.09 |
| Solyc08g066840.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 73.58 | 73.28 |
| GSMUA_Achr10P... | Banana | cytosol, plasma membrane, vacuole | 68.7 | 67.87 |
| Os01t0232000-00 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 63.01 | 61.75 |
| TraesCS3D01G163400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 60.98 | 60.98 |
| EES02191 | Sorghum | cytosol | 62.2 | 60.71 |
| TraesCS3A01G434600.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 57.32 | 59.49 |
| TraesCS3B01G182200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 60.16 | 58.96 |
| VIT_04s0008g03550.t01 | Wine grape | plasma membrane | 68.29 | 55.81 |
| TraesCS3B01G182400.1 | Wheat | plasma membrane | 55.69 | 55.24 |
| TraesCS3A01G155800.1 | Wheat | plasma membrane | 55.69 | 55.24 |
| Zm00001d039713_P001 | Maize | plasma membrane | 55.69 | 55.02 |
| KXG31483 | Sorghum | extracellular, golgi, plasma membrane | 56.1 | 54.55 |
| KRH09912 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 54.06 | 53.85 |
| KRH23420 | Soybean | plasma membrane, vacuole | 54.06 | 53.85 |
| KRG93712 | Soybean | plasma membrane, vacuole | 51.63 | 53.59 |
| Os01t0232100-01 | Rice | cytosol, endoplasmic reticulum, extracellular | 55.69 | 53.52 |
| TraesCS5A01G518300.1 | Wheat | golgi, plasma membrane, vacuole | 55.28 | 53.12 |
| Zm00001d039293_P001 | Maize | plastid | 61.79 | 52.96 |
| TraesCS4D01G344300.1 | Wheat | plasma membrane | 54.88 | 52.94 |
| Zm00001d019676_P001 | Maize | endoplasmic reticulum, extracellular, plastid | 22.76 | 52.83 |
| Zm00001d015518_P001 | Maize | endoplasmic reticulum, extracellular | 22.76 | 52.83 |
| KRH47241 | Soybean | mitochondrion | 53.25 | 52.82 |
| KRH44312 | Soybean | extracellular | 53.25 | 52.82 |
| GSMUA_Achr9P06260_001 | Banana | cytosol, golgi, plasma membrane | 54.47 | 52.55 |
| TraesCS4B01G349500.1 | Wheat | plasma membrane | 54.06 | 52.16 |
| KRH77347 | Soybean | mitochondrion | 51.63 | 51.0 |
| Zm00001d020747_P001 | Maize | extracellular | 21.95 | 50.47 |
| KRH29856 | Soybean | cytosol, plasma membrane, vacuole | 51.63 | 50.4 |
| KRH70511 | Soybean | cytosol | 51.22 | 50.0 |
| KRH01591 | Soybean | cytosol | 51.22 | 50.0 |
| KRH23017 | Soybean | cytosol, plasma membrane, vacuole | 51.22 | 50.0 |
| KRH28112 | Soybean | mitochondrion | 50.41 | 49.8 |
| KRH24847 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 49.59 | 49.8 |
| KRH67767 | Soybean | mitochondrion | 50.41 | 49.6 |
| Zm00001d037779_P001 | Maize | cytosol, plasma membrane, vacuole | 51.22 | 49.41 |
| GSMUA_Achr1P13800_001 | Banana | cytosol | 50.81 | 49.21 |
| KRG96046 | Soybean | nucleus | 50.0 | 49.2 |
| KRH19959 | Soybean | mitochondrion | 48.78 | 48.0 |
| KRH36204 | Soybean | cytosol, extracellular, mitochondrion, plasma membrane | 48.78 | 47.62 |
| KRH10300 | Soybean | endoplasmic reticulum, extracellular | 30.49 | 46.88 |
| HORVU4Hr1G085250.2 | Barley | plastid | 53.25 | 43.52 |
| KRG92517 | Soybean | cytosol | 44.72 | 43.31 |
| KRH38823 | Soybean | nucleus | 44.72 | 43.14 |
| KRH34280 | Soybean | endoplasmic reticulum | 44.31 | 42.91 |
| Os05t0231700-01 | Rice | golgi, mitochondrion, plasma membrane | 54.47 | 42.68 |
| KRH09321 | Soybean | cytosol, mitochondrion, plasma membrane | 43.9 | 42.35 |
| HORVU3Hr1G031620.5 | Barley | nucleus, peroxisome, plastid | 54.47 | 42.14 |
| KRG90553 | Soybean | extracellular | 41.46 | 41.98 |
| Zm00001d010410_P001 | Maize | plasma membrane, plastid | 51.22 | 40.51 |
| EES17913 | Sorghum | cytosol, plastid | 50.0 | 39.17 |
| KRH23943 | Soybean | plasma membrane | 26.83 | 36.07 |
| KRH39857 | Soybean | plastid | 34.96 | 34.13 |
| HORVU3Hr1G031680.1 | Barley | vacuole | 33.33 | 30.6 |
| KRH60692 | Soybean | mitochondrion | 33.74 | 30.18 |
| KRH70183 | Soybean | mitochondrion | 34.96 | 30.18 |
| KRH08523 | Soybean | plasma membrane | 34.96 | 30.18 |
| KRH08522 | Soybean | plasma membrane | 34.96 | 30.18 |
| KRH25011 | Soybean | mitochondrion | 34.96 | 30.07 |
| KRH29919 | Soybean | mitochondrion | 34.96 | 30.07 |
| KRH26410 | Soybean | golgi, peroxisome, plasma membrane | 34.96 | 29.97 |
| KRG97766 | Soybean | endoplasmic reticulum, extracellular, mitochondrion, plasma membrane | 16.26 | 29.85 |
| KRH70184 | Soybean | plasma membrane | 34.55 | 29.82 |
| KRH22889 | Soybean | golgi, peroxisome, plasma membrane | 34.55 | 29.62 |
| KRG91899 | Soybean | plasma membrane | 34.15 | 29.58 |
| KRG95980 | Soybean | plasma membrane | 33.74 | 29.12 |
| KRH67688 | Soybean | plasma membrane | 33.33 | 28.67 |
| KRH00178 | Soybean | golgi, peroxisome, plasma membrane | 33.33 | 28.57 |
| KRH51390 | Soybean | plasma membrane | 32.11 | 28.42 |
| KRH59918 | Soybean | peroxisome | 32.93 | 28.22 |
| KRH16406 | Soybean | extracellular | 17.48 | 28.1 |
| KRH34875 | Soybean | plasma membrane | 33.74 | 28.04 |
| KRH41192 | Soybean | endoplasmic reticulum | 32.93 | 28.03 |
| KRH27918 | Soybean | plasma membrane | 32.52 | 27.97 |
| KRH66037 | Soybean | golgi, peroxisome, plasma membrane | 32.11 | 27.82 |
| KRH77555 | Soybean | plasma membrane | 32.11 | 27.62 |
| KRH31119 | Soybean | endoplasmic reticulum | 32.11 | 27.34 |
| KRH14983 | Soybean | mitochondrion | 31.71 | 26.99 |
| KRH73156 | Soybean | golgi, peroxisome, plasma membrane | 32.11 | 24.76 |
| KRH75838 | Soybean | golgi, peroxisome, plasma membrane | 32.52 | 22.04 |
Protein Annotations
| Gene3D:1.20.1080.10 | EntrezGene:100793258 | MapMan:24.3.1.3 | EMBL:ACUP02003429 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr |
| EnsemblPlantsGene:GLYMA_06G084600 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005886 | GO:GO:0005887 | GO:GO:0006810 | GO:GO:0006833 |
| GO:GO:0008150 | GO:GO:0009705 | GO:GO:0015250 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0034220 | GO:GO:0042807 | GO:GO:0055085 | InterPro:IPR023271 | UniProt:K7KTW9 | EnsemblPlants:KRH52727 |
| ProteinID:KRH52727 | ProteinID:KRH52727.1 | ProteinID:KRH52728.1 | InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 |
| PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF186 | SUPFAM:SSF81338 | TMHMM:TMhelix |
| UniParc:UPI000233A74D | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:+:6503786..6505325
Molecular Weight (calculated)
25628.3 Da
IEP (calculated)
6.131
GRAVY (calculated)
0.784
Length
246 amino acids
Sequence
(BLAST)
(BLAST)
001: MARIALGSTR EATQPDCIQA LIVEFIATFL FVFVGVASSM VVDKLGGDAL VGLFAVAVAH ALVVAVMISA AHISGGHLNP AVTLGLLAGG HITIFRSLLY
101: WIDQLVAAAA ASYLLYYLSG GQATPVHTLA SGVGYGQGVV WEIVLTFSLL FTVYATMVDP KKGALAGLGP TLVGFVVGAN ILAGGAYSAA SMNPARSFGP
201: ALVTGNWTDH WVYWVGPLIG GGLAGFIYET FFIDRSHVPL PRDEES
101: WIDQLVAAAA ASYLLYYLSG GQATPVHTLA SGVGYGQGVV WEIVLTFSLL FTVYATMVDP KKGALAGLGP TLVGFVVGAN ILAGGAYSAA SMNPARSFGP
201: ALVTGNWTDH WVYWVGPLIG GGLAGFIYET FFIDRSHVPL PRDEES
001: MKKIELGHHS EAAKPDCIKA LIVEFITTFL FVFAGVGSAM ATDSLVGNTL VGLFAVAVAH AFVVAVMISA GHISGGHLNP AVTLGLLLGG HISVFRAFLY
101: WIDQLLASSA ACFLLSYLTG GMGTPVHTLA SGVSYTQGII WEIILTFSLL FTVYATIVDP KKGSLDGFGP LLTGFVVGAN ILAGGAFSGA SMNPARSFGP
201: ALVSGNWTDH WVYWVGPLIG GGLAGFIYEN VLIDRPHVPV ADDEQPLLN
101: WIDQLLASSA ACFLLSYLTG GMGTPVHTLA SGVSYTQGII WEIILTFSLL FTVYATIVDP KKGSLDGFGP LLTGFVVGAN ILAGGAFSGA SMNPARSFGP
201: ALVSGNWTDH WVYWVGPLIG GGLAGFIYEN VLIDRPHVPV ADDEQPLLN
Arabidopsis Description
TIP4-1Aquaporin TIP4-1 [Source:UniProtKB/Swiss-Prot;Acc:O82316]
SUBAcon: [cytosol,plasma membrane,golgi]
SUBAcon: [cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.