CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, vacuole

Predictor Summary:

plastid 1
vacuole 4
cytosol 1
extracellular 1
golgi 1
plasma membrane 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH10300	Soybean	endoplasmic reticulum, extracellular	58.73	92.5
KRH29856	Soybean	cytosol, plasma membrane, vacuole	89.68	89.68
KRH24847	Soybean	endoplasmic reticulum, plasma membrane, vacuole	86.51	88.98
Solyc06g075650.2.1	Tomato	endoplasmic reticulum	86.51	86.17
PGSC0003DMT400077927	Potato	cytosol, plasma membrane, plastid, vacuole	86.11	85.77
GSMUA_Achr10P...	Banana	plasma membrane	82.14	82.14
VIT_06s0004g04120.t01	Wine grape	cytosol, plasma membrane, vacuole	85.71	80.6
GSMUA_Achr6P15380_001	Banana	cytosol, plasma membrane, vacuole	79.37	79.37
KRH70511	Soybean	cytosol	79.37	79.37
TraesCS3D01G540900.1	Wheat	plasma membrane	78.17	78.17
TraesCS3A01G535300.1	Wheat	plasma membrane	78.17	78.17
KRH01591	Soybean	cytosol	78.17	78.17
HORVU3Hr1G116790.2	Barley	vacuole	77.78	77.78
TraesCS3B01G608500.1	Wheat	plasma membrane	77.78	77.78
Zm00001d011778_P001	Maize	plasma membrane	78.17	77.56
KRH67767	Soybean	mitochondrion	75.79	76.4
KRG96046	Soybean	nucleus	75.0	75.6
EES04303	Sorghum	cytosol	76.19	74.42
KRH36204	Soybean	cytosol, extracellular, mitochondrion, plasma membrane	73.02	73.02
KRG90553	Soybean	extracellular	61.51	63.79
KRH19959	Soybean	mitochondrion	62.7	63.2
KRG93712	Soybean	plasma membrane, vacuole	57.94	61.6
KRH09912	Soybean	endoplasmic reticulum, plasma membrane, vacuole	59.92	61.13
KRH23420	Soybean	plasma membrane, vacuole	59.52	60.73
KRH44312	Soybean	extracellular	59.13	60.08
KRH28112	Soybean	mitochondrion	59.13	59.84
KRH47241	Soybean	mitochondrion	58.73	59.68
KRH77347	Soybean	mitochondrion	58.73	59.44
KRH34280	Soybean	endoplasmic reticulum	53.97	53.54
KRH38823	Soybean	nucleus	53.57	52.94
KRH09321	Soybean	cytosol, mitochondrion, plasma membrane	52.78	52.16
KRG92517	Soybean	cytosol	52.38	51.97
KRH62059	Soybean	cytosol, plasma membrane, vacuole	50.0	51.22
KRH52727	Soybean	cytosol	50.0	51.22
KRH23943	Soybean	plasma membrane	30.16	41.53
KRH39857	Soybean	plastid	38.89	38.89
KRH16406	Soybean	extracellular	21.43	35.29
KRG97766	Soybean	endoplasmic reticulum, extracellular, mitochondrion, plasma membrane	17.86	33.58
KRH26410	Soybean	golgi, peroxisome, plasma membrane	37.7	33.1
KRH22889	Soybean	golgi, peroxisome, plasma membrane	37.7	33.1
KRH60692	Soybean	mitochondrion	35.71	32.73
KRG91899	Soybean	plasma membrane	36.51	32.39
KRH70183	Soybean	mitochondrion	36.51	32.28
KRH08523	Soybean	plasma membrane	36.11	31.93
KRH70184	Soybean	plasma membrane	36.11	31.93
KRH08522	Soybean	plasma membrane	36.11	31.93
KRH51390	Soybean	plasma membrane	34.52	31.3
KRH29919	Soybean	mitochondrion	35.32	31.12
KRH25011	Soybean	mitochondrion	35.32	31.12
KRH67688	Soybean	plasma membrane	34.92	30.77
KRH34875	Soybean	plasma membrane	36.11	30.74
KRG95980	Soybean	plasma membrane	34.52	30.53
KRH00178	Soybean	golgi, peroxisome, plasma membrane	34.13	29.97
KRH66037	Soybean	golgi, peroxisome, plasma membrane	33.33	29.58
KRH31119	Soybean	endoplasmic reticulum	33.33	29.07
KRH77555	Soybean	plasma membrane	32.94	29.02
KRH14983	Soybean	mitochondrion	32.94	28.72
KRH27918	Soybean	plasma membrane	32.54	28.67
KRH59918	Soybean	peroxisome	32.54	28.57
KRH41192	Soybean	endoplasmic reticulum	32.54	28.37
KRH73156	Soybean	golgi, peroxisome, plasma membrane	32.94	26.02
KRH75838	Soybean	golgi, peroxisome, plasma membrane	33.33	23.14

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.3	EMBL:ACUP02008450	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	EnsemblPlantsGene:GLYMA_13G333100
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006833	GO:GO:0008150
GO:GO:0009705	GO:GO:0015250	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220
GO:GO:0042807	GO:GO:0055085	UniProt:I1M4S8	InterPro:IPR023271	EnsemblPlants:KRH23017	ProteinID:KRH23017
ProteinID:KRH23017.1	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221
PANTHER:PTHR19139	PANTHER:PTHR19139:SF55	SUPFAM:SSF81338	TMHMM:TMhelix	UniParc:UPI0001B357E1	:

Description

hypothetical protein

Coordinates

chr13:+:42710256..42711669

Molecular Weight (calculated)

26012.5 Da

IEP (calculated)

5.050

GRAVY (calculated)

0.783

Length

252 amino acids

Sequence
(BLAST)

001: MPISRIAIGN SSELNQSDAL KAALAEFISM LIFVFAGEGS GMAYNKLTNN GSATPAGLVA ASLSHAFALF VAVSVGANIS GGHVNPAVTF GAFVGGHITL
101: FRSILYWIAQ LLGSVVACLL LKFATGGLET SAFALSPGVE AGNALVFEIV MTFGLVYTVY ATAVDPKKGD LGIIAPIAIG FIVGANILAG GAFDGASMNP
201: AVSFGPAVVS WTWSNHWVYW VGPFAGAAIA AVVYEIFFIS PNTHEQLPVT DY

Best Arabidopsis Sequence Match ( AT4G01470.1 )
(BLAST)

001: MPINRIAIGT PGEASRPDAI RAAFAEFFSM VIFVFAGQGS GMAYGKLTGD GPATPAGLVA ASLSHAFALF VAVSVGANVS GGHVNPAVTF GAFIGGNITL
101: LRAILYWIAQ LLGAVVACLL LKVSTGGMET AAFSLSYGVT PWNAVVFEIV MTFGLVYTVY ATAVDPKKGD IGIIAPLAIG LIVGANILVG GAFDGASMNP
201: AVSFGPAVVS WIWTNHWVYW VGPFIGAAIA AIVYDTIFIG SNGHEPLPSN DF

Arabidopsis Description

TIP1-3Aquaporin TIP1-3 [Source:UniProtKB/Swiss-Prot;Acc:O82598]
SUBAcon: [cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.