Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 6
- plasma membrane 4
- golgi 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
mitochondrion:
28499913
|
msms PMID:
28499913
doi
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH28112 | Soybean | mitochondrion | 95.18 | 95.18 |
| Bra026245.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 78.71 | 78.4 |
| CDY65121 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 78.71 | 78.4 |
| VIT_00s2783g00010.t01 | Wine grape | extracellular | 38.96 | 78.23 |
| CDY64499 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 78.31 | 78.0 |
| Bra022131.1-P | Field mustard | extracellular | 63.86 | 77.94 |
| CDY51678 | Canola | plasma membrane, vacuole | 77.91 | 77.6 |
| CDY28932 | Canola | endoplasmic reticulum, extracellular, vacuole | 65.06 | 77.14 |
| PGSC0003DMT400030994 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 77.11 | 76.8 |
| CDY59296 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 77.11 | 76.49 |
| CDX77768 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 77.11 | 76.49 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, plasma membrane | 76.31 | 76.31 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane | 76.31 | 76.31 |
| KRH47241 | Soybean | mitochondrion | 75.9 | 76.21 |
| KRH44312 | Soybean | extracellular | 75.9 | 76.21 |
| Bra024943.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 76.71 | 76.1 |
| Solyc06g060760.2.1 | Tomato | endoplasmic reticulum | 76.31 | 76.0 |
| Zm00001d002738_P001 | Maize | plasma membrane | 75.5 | 75.81 |
| Os02t0658100-01 | Rice | vacuole | 62.65 | 75.73 |
| KRG93712 | Soybean | plasma membrane, vacuole | 71.49 | 75.11 |
| Zm00001d051362_P001 | Maize | plasma membrane | 75.1 | 75.1 |
| EES12617 | Sorghum | plasma membrane | 74.7 | 74.7 |
| Zm00001d026177_P001 | Maize | extracellular | 74.3 | 74.6 |
| KRH09912 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 73.9 | 74.49 |
| Zm00001d017485_P002 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 74.3 | 74.0 |
| KXG31086 | Sorghum | golgi, plasma membrane, vacuole | 73.9 | 73.9 |
| HORVU6Hr1G062980.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 73.9 | 73.9 |
| HORVU0Hr1G032130.2 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 73.9 | 73.9 |
| TraesCS6D01G232100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 73.9 | 73.9 |
| TraesCS6A01G250300.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 73.9 | 73.9 |
| KRH23420 | Soybean | plasma membrane, vacuole | 73.09 | 73.68 |
| TraesCS6B01G275100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 73.09 | 73.09 |
| TraesCS2A01G414100.1 | Wheat | plasma membrane | 71.08 | 71.37 |
| TraesCS2D01G411400.1 | Wheat | plasma membrane | 70.68 | 70.97 |
| TraesCS2B01G433200.1 | Wheat | plasma membrane | 70.28 | 70.56 |
| Os04t0550900-00 | Rice | endoplasmic reticulum, extracellular, vacuole | 37.75 | 66.2 |
| KRH24847 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 61.45 | 62.45 |
| KRH67767 | Soybean | mitochondrion | 62.65 | 62.4 |
| KRH29856 | Soybean | cytosol, plasma membrane, vacuole | 62.65 | 61.9 |
| KRH10300 | Soybean | endoplasmic reticulum, extracellular | 39.76 | 61.88 |
| KRG96046 | Soybean | nucleus | 61.04 | 60.8 |
| KRH23017 | Soybean | cytosol, plasma membrane, vacuole | 59.44 | 58.73 |
| KRH70511 | Soybean | cytosol | 57.83 | 57.14 |
| KRH01591 | Soybean | cytosol | 57.43 | 56.75 |
| KRH19959 | Soybean | mitochondrion | 55.02 | 54.8 |
| KRH36204 | Soybean | cytosol, extracellular, mitochondrion, plasma membrane | 54.22 | 53.57 |
| KRH62059 | Soybean | cytosol, plasma membrane, vacuole | 51.81 | 52.44 |
| AT1G52180.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 26.1 | 52.42 |
| KRH52727 | Soybean | cytosol | 51.0 | 51.63 |
| KRH34280 | Soybean | endoplasmic reticulum | 51.0 | 50.0 |
| KRH38823 | Soybean | nucleus | 50.6 | 49.41 |
| KRH09321 | Soybean | cytosol, mitochondrion, plasma membrane | 50.6 | 49.41 |
| KRG90553 | Soybean | extracellular | 48.19 | 49.38 |
| KRG92517 | Soybean | cytosol | 49.8 | 48.82 |
| KRH23943 | Soybean | plasma membrane | 32.93 | 44.81 |
| KRH39857 | Soybean | plastid | 40.56 | 40.08 |
| KRG97766 | Soybean | endoplasmic reticulum, extracellular, mitochondrion, plasma membrane | 18.47 | 34.33 |
| KRH60692 | Soybean | mitochondrion | 36.55 | 33.09 |
| KRH29919 | Soybean | mitochondrion | 37.35 | 32.52 |
| KRH25011 | Soybean | mitochondrion | 37.35 | 32.52 |
| KRH22889 | Soybean | golgi, peroxisome, plasma membrane | 37.35 | 32.4 |
| KRH26410 | Soybean | golgi, peroxisome, plasma membrane | 37.35 | 32.4 |
| KRG91899 | Soybean | plasma membrane | 36.55 | 32.04 |
| KRH16406 | Soybean | extracellular | 19.68 | 32.03 |
| KRH51390 | Soybean | plasma membrane | 35.74 | 32.01 |
| KRH67688 | Soybean | plasma membrane | 36.55 | 31.82 |
| KRG95980 | Soybean | plasma membrane | 36.14 | 31.58 |
| KRH70184 | Soybean | plasma membrane | 35.74 | 31.23 |
| KRH70183 | Soybean | mitochondrion | 35.34 | 30.88 |
| KRH08522 | Soybean | plasma membrane | 34.94 | 30.53 |
| KRH08523 | Soybean | plasma membrane | 34.94 | 30.53 |
| KRH34875 | Soybean | plasma membrane | 36.14 | 30.41 |
| KRH66037 | Soybean | golgi, peroxisome, plasma membrane | 34.14 | 29.93 |
| KRH00178 | Soybean | golgi, peroxisome, plasma membrane | 33.73 | 29.27 |
| KRH31119 | Soybean | endoplasmic reticulum | 33.73 | 29.07 |
| KRH14983 | Soybean | mitochondrion | 33.73 | 29.07 |
| KRH27918 | Soybean | plasma membrane | 33.33 | 29.02 |
| KRH77555 | Soybean | plasma membrane | 32.93 | 28.67 |
| KRH59918 | Soybean | peroxisome | 32.93 | 28.57 |
| KRH41192 | Soybean | endoplasmic reticulum | 32.93 | 28.37 |
| KRH73156 | Soybean | golgi, peroxisome, plasma membrane | 33.73 | 26.33 |
| KRH75838 | Soybean | golgi, peroxisome, plasma membrane | 34.14 | 23.42 |
Protein Annotations
| Gene3D:1.20.1080.10 | EntrezGene:100527338 | MapMan:24.3.1.3 | EMBL:ACUP02000669 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr |
| EnsemblPlantsGene:GLYMA_01G208200 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005886 | GO:GO:0005887 | GO:GO:0006810 | GO:GO:0006833 |
| GO:GO:0008150 | GO:GO:0009705 | GO:GO:0015250 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0034220 | GO:GO:0042807 | GO:GO:0055085 | UniProt:I1J9U6 | InterPro:IPR023271 | EnsemblPlants:KRH77347 |
| ProteinID:KRH77347 | ProteinID:KRH77347.1 | InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 |
| ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF257 | SUPFAM:SSF81338 | TIGRFAMs:TIGR00861 | TMHMM:TMhelix |
| UniParc:UPI0001BA23C7 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:53995079..53997886
Molecular Weight (calculated)
25277.8 Da
IEP (calculated)
4.981
GRAVY (calculated)
0.913
Length
249 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKIALGTLD DSFSAASLKA YFAEFHATLI FVFAGVGSAI AYNELTKDAA LDPTGLVAVA VAHAFALFVG VSVAANISGG HLNPAVTFGL AIGGNITLIT
101: GFLYWIAQLL GSIVACLLLN LITAKSIPSH SPANGVNDLQ AVVFEIVITF GLVYTVYATA VDPKKGSLGI IAPIAIGFVV GANILAAGPF SGGSMNPARS
201: FGPAVVSGDL AANWIYWVGP LIGGGLAGLI YGDVFIGSYA PVPASETYP
101: GFLYWIAQLL GSIVACLLLN LITAKSIPSH SPANGVNDLQ AVVFEIVITF GLVYTVYATA VDPKKGSLGI IAPIAIGFVV GANILAAGPF SGGSMNPARS
201: FGPAVVSGDL AANWIYWVGP LIGGGLAGLI YGDVFIGSYA PVPASETYP
001: MVKIEVGSVG DSFSVSSLKA YLSEFIATLL FVFAGVGSAV AFAKLTSDGA LDPAGLVAIA IAHAFALFVG VSIAANISGG HLNPAVTLGL AIGGNITLIT
101: GFFYWIAQCL GSIVACLLLV FVTNGKSVPT HGVSAGLGAV EGVVMEIVVT FALVYTVYAT AADPKKGSLG TIAPIAIGFI VGANILAAGP FSGGSMNPAR
201: SFGPAVVSGD LSQIWIYWVG PLVGGALAGL IYGDVFIGSY EAVETREIRV
101: GFFYWIAQCL GSIVACLLLV FVTNGKSVPT HGVSAGLGAV EGVVMEIVVT FALVYTVYAT AADPKKGSLG TIAPIAIGFI VGANILAAGP FSGGSMNPAR
201: SFGPAVVSGD LSQIWIYWVG PLVGGALAGL IYGDVFIGSY EAVETREIRV
Arabidopsis Description
TIP2-3Aquaporin TIP2-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGL2]
SUBAcon: [plasma membrane,golgi]
SUBAcon: [plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.