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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • mitochondrion 1
  • endoplasmic reticulum 3
  • extracellular 2
  • vacuole 2
  • plasma membrane 4
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, secretory
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G340600.1
TraesCS1D01G342600.1
TraesCS2A01G368500.1
TraesCS2B01G385700.2
TraesCS2D01G365300.2
TraesCS3A01G274800.1
TraesCS3A01G313000.1
TraesCS3B01G158900.1
TraesCS3B01G308400.1
TraesCS3D01G141300.1
TraesCS3D01G274500.1
TraesCS6A01G237600.1
TraesCS6B01G266100.1
TraesCS6D01G220300.1
TraesCS7A01G300700.1
TraesCS7D01G296400.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G17340.1 TraesCS1A01G340600.1 AT3G16310.1 21798944
AT4G17340.1 TraesCS1D01G342600.1 AT3G16310.1 21798944
AT4G17340.1 TraesCS3A01G274800.1 AT3G16310.1 21798944
AT4G17340.1 TraesCS3A01G313000.1 AT3G16310.1 21798944
AT4G17340.1 TraesCS3B01G158900.1 AT3G16310.1 21798944
AT4G17340.1 TraesCS3B01G308400.1 AT3G16310.1 21798944
AT4G17340.1 TraesCS3D01G141300.1 AT3G16310.1 21798944
AT4G17340.1 TraesCS3D01G274500.1 AT3G16310.1 21798944
AT4G17340.1 TraesCS2A01G368500.1 AT3G60600.1 21798944
AT4G17340.1 TraesCS2B01G385700.2 AT3G60600.1 21798944
AT4G17340.1 TraesCS2D01G365300.2 AT3G60600.1 21798944
AT4G17340.1 TraesCS6A01G237600.1 AT3G60600.1 21798944
AT4G17340.1 TraesCS6B01G266100.1 AT3G60600.1 21798944
AT4G17340.1 TraesCS6D01G220300.1 AT3G60600.1 21798944
AT4G17340.1 TraesCS7A01G300700.1 AT3G60600.1 21798944
AT4G17340.1 TraesCS7D01G296400.1 AT3G60600.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G414100.1 Wheat plasma membrane 98.79 98.79
TraesCS2B01G433200.1 Wheat plasma membrane 98.79 98.79
Zm00001d002738_P001 Maize plasma membrane 91.53 91.53
EES12617 Sorghum plasma membrane 90.73 90.36
Zm00001d026177_P001 Maize extracellular 90.32 90.32
TraesCS6D01G232100.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 88.71 88.35
GSMUA_Achr11P... Banana extracellular, plasma membrane 83.87 83.53
GSMUA_Achr11P... Banana endoplasmic reticulum, plasma membrane 81.85 81.53
PGSC0003DMT400030994 Potato endoplasmic reticulum, plasma membrane, vacuole 81.05 80.4
Os04t0550900-00 Rice endoplasmic reticulum, extracellular, vacuole 45.97 80.28
Solyc06g060760.2.1 Tomato endoplasmic reticulum 80.24 79.6
VIT_00s0229g00130.t01 Wine grape endoplasmic reticulum, plasma membrane, vacuole 77.42 76.8
VIT_00s2783g00010.t01 Wine grape extracellular 38.31 76.61
Bra026245.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 75.81 75.2
CDY65121 Canola endoplasmic reticulum, plasma membrane, vacuole 75.81 75.2
Bra022131.1-P Field mustard extracellular 61.69 75.0
AT4G17340.1 Thale cress golgi, plasma membrane, vacuole 75.4 74.8
CDY64499 Canola endoplasmic reticulum, plasma membrane, vacuole 75.4 74.8
AT5G47450.1 Thale cress golgi, plasma membrane 75.0 74.4
CDY28932 Canola endoplasmic reticulum, extracellular, vacuole 62.5 73.81
CDY51678 Canola plasma membrane, vacuole 73.79 73.2
CDY59296 Canola endoplasmic reticulum, plasma membrane, vacuole 73.39 72.51
CDX77768 Canola endoplasmic reticulum, plasma membrane, vacuole 73.39 72.51
Bra024943.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 72.98 72.11
KRH28112 Soybean mitochondrion 71.37 71.08
KRH77347 Soybean mitochondrion 70.97 70.68
TraesCS7D01G339600.1 Wheat plasma membrane 68.55 60.93
TraesCS4D01G308800.1 Wheat golgi, plasma membrane, vacuole 59.68 57.59
TraesCS3D01G540900.1 Wheat plasma membrane 57.66 56.75
AT1G52180.1 Thale cress endoplasmic reticulum, extracellular, vacuole 27.42 54.84
TraesCS3D01G163400.1 Wheat endoplasmic reticulum, extracellular, vacuole 48.79 49.19
TraesCS1D01G175200.1 Wheat unclear 49.6 46.77
TraesCS4D01G344300.1 Wheat plasma membrane 46.37 45.1
TraesCS2D01G370800.1 Wheat plasma membrane 46.37 43.4
TraesCS2D01G411500.1 Wheat endoplasmic reticulum 45.16 42.75
TraesCS5D01G112500.1 Wheat plasma membrane 38.71 33.57
TraesCS5D01G561700.1 Wheat golgi, peroxisome, plasma membrane 38.31 33.45
TraesCS2D01G206300.1 Wheat golgi 38.31 32.76
TraesCS2D01G063900.1 Wheat plasma membrane 37.1 32.39
TraesCS2D01G376100.1 Wheat plasma membrane 37.5 32.07
TraesCS2D01G376000.1 Wheat golgi 37.5 32.07
TraesCS6D01G212900.1 Wheat golgi, plasma membrane 36.69 31.82
TraesCS5D01G560400.1 Wheat golgi, peroxisome, plasma membrane 35.89 30.58
TraesCS4D01G355600.1 Wheat golgi, peroxisome, plasma membrane 35.89 30.48
TraesCS5D01G548900.1 Wheat golgi, peroxisome, plasma membrane 35.08 30.1
TraesCS5D01G338200.1 Wheat plasma membrane 35.08 29.9
TraesCS6D01G076400.1 Wheat golgi, peroxisome, plasma membrane 34.68 29.15
TraesCS6D01G389400.1 Wheat plasma membrane 34.27 29.11
TraesCS6D01G389500.1 Wheat plasma membrane 34.27 29.11
TraesCS5D01G185400.1 Wheat plasma membrane 33.87 28.77
TraesCS6D01G227500.1 Wheat golgi 33.06 28.28
TraesCS2D01G404800.2 Wheat golgi, peroxisome, plasma membrane 31.45 24.84
TraesCS7D01G192200.1 Wheat golgi, peroxisome, plasma membrane 30.24 24.67
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.3InterPro:Aquaporin-likeInterPro:Aquaporin_transptrGO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0055085
InterPro:IPR023271InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783ScanProsite:PS00221
PANTHER:PTHR19139PANTHER:PTHR19139:SF257SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelixEnsemblPlantsGene:TraesCS2D01G411400
EnsemblPlants:TraesCS2D01G411400.1TIGR:cd00333::::
Description
No Description!
Coordinates
chr2D:+:526345277..526346179
Molecular Weight (calculated)
25188.7 Da
IEP (calculated)
6.381
GRAVY (calculated)
0.849
Length
248 amino acids
Sequence
(BLAST)
001: MVKLAFGSFG DSFSATSVRS YVAEFIATLL FVFAGVGSAI SYGQLTQGGA LDPAGLVAIA IAHAFALFVG VAMAANISGG HLNPAVTFGL AVGGHVTILT
101: GLFYWVAQLL GATVACLLLQ FVTHGQPMPT HAVSGISEIE GVVMEIVITF ALVYTVYATA ADPKKGSLGT IAPMAIGFIV GANILAAGPF SGGSMNPARS
201: FGPAVAAGNF SGHWVYWVGP LIGGGLAGLV YGDVFIASYQ PVGHQDYP
Best Arabidopsis Sequence Match ( AT3G16240.1 )
(BLAST)
001: MAGVAFGSFD DSFSLASLRA YLAEFISTLL FVFAGVGSAI AYAKLTSDAA LDTPGLVAIA VCHGFALFVA VAIGANISGG HVNPAVTFGL AVGGQITVIT
101: GVFYWIAQLL GSTAACFLLK YVTGGLAVPT HSVAAGLGSI EGVVMEIIIT FALVYTVYAT AADPKKGSLG TIAPLAIGLI VGANILAAGP FSGGSMNPAR
201: SFGPAVAAGD FSGHWVYWVG PLIGGGLAGL IYGNVFMGSS EHVPLASADF
Arabidopsis Description
TIP2-1Aquaporin TIP2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q41951]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.