Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
golgi:
25769308
unclear: 25769308 |
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS2A01G379800.1 | Wheat | plasma membrane | 99.66 | 99.66 |
HORVU2Hr1G089940.3 | Barley | plasma membrane | 97.93 | 97.93 |
TraesCS2B01G396700.2 | Wheat | plasma membrane | 99.31 | 97.63 |
TraesCS2D01G376100.1 | Wheat | plasma membrane | 97.59 | 97.59 |
TraesCS6D01G212900.1 | Wheat | golgi, plasma membrane | 87.93 | 89.16 |
GSMUA_AchrUn_... | Banana | extracellular | 59.66 | 88.72 |
Zm00001d017288_P001 | Maize | plasma membrane | 87.93 | 88.54 |
Zm00001d051174_P002 | Maize | plasma membrane | 87.93 | 88.24 |
GSMUA_Achr4P20780_001 | Banana | extracellular | 59.31 | 87.76 |
GSMUA_Achr11P... | Banana | extracellular | 58.97 | 87.24 |
GSMUA_Achr8P18910_001 | Banana | extracellular | 58.97 | 87.24 |
EES05459 | Sorghum | plasma membrane | 86.9 | 87.2 |
Os02t0629200-02 | Rice | plasma membrane | 85.86 | 86.46 |
TraesCS2D01G206300.1 | Wheat | golgi | 83.79 | 83.79 |
TraesCS5D01G112500.1 | Wheat | plasma membrane | 80.34 | 81.47 |
TraesCS2D01G063900.1 | Wheat | plasma membrane | 74.48 | 76.06 |
TraesCS5D01G561700.1 | Wheat | golgi, peroxisome, plasma membrane | 74.14 | 75.7 |
TraesCS5D01G560400.1 | Wheat | golgi, peroxisome, plasma membrane | 68.97 | 68.73 |
TraesCS5D01G548900.1 | Wheat | golgi, peroxisome, plasma membrane | 67.93 | 68.17 |
TraesCS5D01G338200.1 | Wheat | plasma membrane | 68.28 | 68.04 |
TraesCS4D01G355600.1 | Wheat | golgi, peroxisome, plasma membrane | 68.28 | 67.81 |
TraesCS6D01G389500.1 | Wheat | plasma membrane | 67.24 | 66.78 |
TraesCS6D01G389400.1 | Wheat | plasma membrane | 66.9 | 66.44 |
TraesCS5D01G185400.1 | Wheat | plasma membrane | 66.55 | 66.1 |
TraesCS6D01G227500.1 | Wheat | golgi | 65.86 | 65.86 |
TraesCS6D01G076400.1 | Wheat | golgi, peroxisome, plasma membrane | 65.52 | 64.41 |
TraesCS7D01G192200.1 | Wheat | golgi, peroxisome, plasma membrane | 60.34 | 57.57 |
TraesCS2D01G404800.2 | Wheat | golgi, peroxisome, plasma membrane | 62.07 | 57.32 |
TraesCS2D01G411400.1 | Wheat | plasma membrane | 32.07 | 37.5 |
TraesCS6D01G232100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 31.03 | 36.14 |
TraesCS3D01G540900.1 | Wheat | plasma membrane | 31.38 | 36.11 |
TraesCS3D01G163400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 29.66 | 34.96 |
TraesCS7D01G339600.1 | Wheat | plasma membrane | 32.41 | 33.69 |
TraesCS4D01G308800.1 | Wheat | golgi, plasma membrane, vacuole | 29.31 | 33.07 |
TraesCS1D01G175200.1 | Wheat | unclear | 28.97 | 31.94 |
TraesCS2D01G370800.1 | Wheat | plasma membrane | 28.62 | 31.32 |
TraesCS4D01G344300.1 | Wheat | plasma membrane | 26.21 | 29.8 |
TraesCS2D01G411500.1 | Wheat | endoplasmic reticulum | 26.9 | 29.77 |
Protein Annotations
Gene3D:1.20.1080.10 | MapMan:24.3.1.2 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 | GO:GO:0005215 |
GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0055085 |
InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 |
PANTHER:PTHR19139 | PANTHER:PTHR19139:SF137 | SUPFAM:SSF81338 | TIGRFAMs:TIGR00861 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS2D01G376000 |
EnsemblPlants:TraesCS2D01G376000.1 | TIGR:cd00333 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2D:-:480179550..480181671
Molecular Weight (calculated)
30378.8 Da
IEP (calculated)
8.294
GRAVY (calculated)
0.538
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKDIEAAPP GGGYAAKDYS DPPPAPLFDA EELTKWSLYR AVIAEFVATL LFLYITVATV IGYKHQADPA GPNAADAACS GVGILGIAWA FGGMIFVLVY
101: CTAGVSGGHI NPAVTFGLFL ARKVSLVRAL LYIIAQCLGA ICGVGLVKGF QSAFYVRYGG GANELSSGFS KGTGLAAEII GTFVLVYTVF SATDPKRSAR
201: DSHVPVLAPL PIGFAVFMVH LATIPITGTG INPARSLGAA VIYNNEKAWD DHWIFWVGPF IGAAIAALYH QYVLRASATK FGSSASFGSR
101: CTAGVSGGHI NPAVTFGLFL ARKVSLVRAL LYIIAQCLGA ICGVGLVKGF QSAFYVRYGG GANELSSGFS KGTGLAAEII GTFVLVYTVF SATDPKRSAR
201: DSHVPVLAPL PIGFAVFMVH LATIPITGTG INPARSLGAA VIYNNEKAWD DHWIFWVGPF IGAAIAALYH QYVLRASATK FGSSASFGSR
001: MAKDVEGPEG FQTRDYEDPP PTPFFDADEL TKWSLYRAVI AEFVATLLFL YITVLTVIGY KIQSDTKAGG VDCGGVGILG IAWAFGGMIF ILVYCTAGIS
101: GGHINPAVTF GLFLARKVSL IRAVLYMVAQ CLGAICGVGF VKAFQSSYYD RYGGGANSLA DGYNTGTGLA AEIIGTFVLV YTVFSATDPK RNARDSHVPV
201: LAPLPIGFAV FMVHLATIPI TGTGINPARS FGAAVIYNKS KPWDDHWIFW VGPFIGAAIA AFYHQFVLRA SGSKSLGSFR SAANV
101: GGHINPAVTF GLFLARKVSL IRAVLYMVAQ CLGAICGVGF VKAFQSSYYD RYGGGANSLA DGYNTGTGLA AEIIGTFVLV YTVFSATDPK RNARDSHVPV
201: LAPLPIGFAV FMVHLATIPI TGTGINPARS FGAAVIYNKS KPWDDHWIFW VGPFIGAAIA AFYHQFVLRA SGSKSLGSFR SAANV
Arabidopsis Description
PIP2Bplasma membrane intrinsic protein 2 [Source:TAIR;Acc:AT2G37170]
SUBAcon: [peroxisome,golgi,plasma membrane]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.