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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:golgi, plasma membrane
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
golgi: 25769308
unclear: 25769308
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G379800.1 Wheat plasma membrane 99.66 99.66
HORVU2Hr1G089940.3 Barley plasma membrane 97.93 97.93
TraesCS2B01G396700.2 Wheat plasma membrane 99.31 97.63
TraesCS2D01G376100.1 Wheat plasma membrane 97.59 97.59
TraesCS6D01G212900.1 Wheat golgi, plasma membrane 87.93 89.16
GSMUA_AchrUn_... Banana extracellular 59.66 88.72
Zm00001d017288_P001 Maize plasma membrane 87.93 88.54
Zm00001d051174_P002 Maize plasma membrane 87.93 88.24
GSMUA_Achr4P20780_001 Banana extracellular 59.31 87.76
GSMUA_Achr11P... Banana extracellular 58.97 87.24
GSMUA_Achr8P18910_001 Banana extracellular 58.97 87.24
EES05459 Sorghum plasma membrane 86.9 87.2
Os02t0629200-02 Rice plasma membrane 85.86 86.46
TraesCS2D01G206300.1 Wheat golgi 83.79 83.79
TraesCS5D01G112500.1 Wheat plasma membrane 80.34 81.47
TraesCS2D01G063900.1 Wheat plasma membrane 74.48 76.06
TraesCS5D01G561700.1 Wheat golgi, peroxisome, plasma membrane 74.14 75.7
TraesCS5D01G560400.1 Wheat golgi, peroxisome, plasma membrane 68.97 68.73
TraesCS5D01G548900.1 Wheat golgi, peroxisome, plasma membrane 67.93 68.17
TraesCS5D01G338200.1 Wheat plasma membrane 68.28 68.04
TraesCS4D01G355600.1 Wheat golgi, peroxisome, plasma membrane 68.28 67.81
TraesCS6D01G389500.1 Wheat plasma membrane 67.24 66.78
TraesCS6D01G389400.1 Wheat plasma membrane 66.9 66.44
TraesCS5D01G185400.1 Wheat plasma membrane 66.55 66.1
TraesCS6D01G227500.1 Wheat golgi 65.86 65.86
TraesCS6D01G076400.1 Wheat golgi, peroxisome, plasma membrane 65.52 64.41
TraesCS7D01G192200.1 Wheat golgi, peroxisome, plasma membrane 60.34 57.57
TraesCS2D01G404800.2 Wheat golgi, peroxisome, plasma membrane 62.07 57.32
TraesCS2D01G411400.1 Wheat plasma membrane 32.07 37.5
TraesCS6D01G232100.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 31.03 36.14
TraesCS3D01G540900.1 Wheat plasma membrane 31.38 36.11
TraesCS3D01G163400.1 Wheat endoplasmic reticulum, extracellular, vacuole 29.66 34.96
TraesCS7D01G339600.1 Wheat plasma membrane 32.41 33.69
TraesCS4D01G308800.1 Wheat golgi, plasma membrane, vacuole 29.31 33.07
TraesCS1D01G175200.1 Wheat unclear 28.97 31.94
TraesCS2D01G370800.1 Wheat plasma membrane 28.62 31.32
TraesCS4D01G344300.1 Wheat plasma membrane 26.21 29.8
TraesCS2D01G411500.1 Wheat endoplasmic reticulum 26.9 29.77
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.2InterPro:Aquaporin-likeInterPro:Aquaporin_transptrGO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0055085
InterPro:IPR023271InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783ScanProsite:PS00221
PANTHER:PTHR19139PANTHER:PTHR19139:SF137SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelixEnsemblPlantsGene:TraesCS2D01G376000
EnsemblPlants:TraesCS2D01G376000.1TIGR:cd00333SEG:seg:::
Description
No Description!
Coordinates
chr2D:-:480179550..480181671
Molecular Weight (calculated)
30378.8 Da
IEP (calculated)
8.294
GRAVY (calculated)
0.538
Length
290 amino acids
Sequence
(BLAST)
001: MAKDIEAAPP GGGYAAKDYS DPPPAPLFDA EELTKWSLYR AVIAEFVATL LFLYITVATV IGYKHQADPA GPNAADAACS GVGILGIAWA FGGMIFVLVY
101: CTAGVSGGHI NPAVTFGLFL ARKVSLVRAL LYIIAQCLGA ICGVGLVKGF QSAFYVRYGG GANELSSGFS KGTGLAAEII GTFVLVYTVF SATDPKRSAR
201: DSHVPVLAPL PIGFAVFMVH LATIPITGTG INPARSLGAA VIYNNEKAWD DHWIFWVGPF IGAAIAALYH QYVLRASATK FGSSASFGSR
Best Arabidopsis Sequence Match ( AT2G37170.1 )
(BLAST)
001: MAKDVEGPEG FQTRDYEDPP PTPFFDADEL TKWSLYRAVI AEFVATLLFL YITVLTVIGY KIQSDTKAGG VDCGGVGILG IAWAFGGMIF ILVYCTAGIS
101: GGHINPAVTF GLFLARKVSL IRAVLYMVAQ CLGAICGVGF VKAFQSSYYD RYGGGANSLA DGYNTGTGLA AEIIGTFVLV YTVFSATDPK RNARDSHVPV
201: LAPLPIGFAV FMVHLATIPI TGTGINPARS FGAAVIYNKS KPWDDHWIFW VGPFIGAAIA AFYHQFVLRA SGSKSLGSFR SAANV
Arabidopsis Description
PIP2Bplasma membrane intrinsic protein 2 [Source:TAIR;Acc:AT2G37170]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.