Factsheet for Zm00001d017288_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

plasma membrane: 14671024

extracellular: 20408568
plastid: 22065420
plasma membrane: 23353019
plasma membrane: 23508561
plasma membrane: 27341663

gfp PMID: 14671024 doi

K Fetter, V Van Wilder, M Moshelion, F Chaumont

Unité de Biochimie Physiologique, Institut des Science de la Vie, Université Catholique de Louvain, Croix du Sud 2-20, B-1348 Louvain-la-Neuve, Belgium.

msms PMID: 23353019 doi

D Hopff, S Wienkoop, S Lüthje

University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Plant Physiology, Ohnhorststraße 18, D-22609 Hamburg, Germany.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051174_P002	Maize	plasma membrane	98.96	98.62
EES05459	Sorghum	plasma membrane	97.92	97.58
GSMUA_Achr4P20780_001	Banana	extracellular	63.54	93.37
Os02t0629200-02	Rice	plasma membrane	93.06	93.06
GSMUA_Achr11P...	Banana	extracellular	63.19	92.86
GSMUA_AchrUn_...	Banana	extracellular	62.5	92.31
GSMUA_Achr8P18910_001	Banana	extracellular	62.15	91.33
Zm00001d003006_P001	Maize	plasma membrane	90.28	91.23
TraesCS6A01G222100.1	Wheat	golgi, peroxisome, plasma membrane	90.28	90.91
TraesCS6D01G212900.1	Wheat	golgi, plasma membrane	90.28	90.91
TraesCS6B01G259000.1	Wheat	golgi, peroxisome, plasma membrane	89.93	90.56
TraesCS2B01G396800.1	Wheat	golgi	89.93	89.31
TraesCS2D01G376100.1	Wheat	plasma membrane	89.24	88.62
TraesCS2A01G379900.1	Wheat	plasma membrane	89.24	88.62
TraesCS2A01G379800.1	Wheat	plasma membrane	88.89	88.28
TraesCS2D01G376000.1	Wheat	golgi	88.54	87.93
HORVU2Hr1G089940.3	Barley	plasma membrane	88.19	87.59
TraesCS2B01G396700.2	Wheat	plasma membrane	88.54	86.44
Zm00001d019563_P006	Maize	plasma membrane	86.11	85.52
Zm00001d019565_P001	Maize	plasma membrane	84.72	84.72
Zm00001d005410_P001	Maize	plasma membrane	83.68	84.27
Zm00001d005421_P001	Maize	plasma membrane	83.68	82.53
Zm00001d014285_P001	Maize	plasma membrane	70.14	71.38
Zm00001d022608_P001	Maize	plasma membrane	68.75	68.75
Zm00001d017526_P001	Maize	plasma membrane	66.32	66.09
Zm00001d051872_P001	Maize	plasma membrane	65.97	65.97
Zm00001d002690_P001	Maize	plasma membrane	65.62	65.62
Zm00001d051403_P001	Maize	plasma membrane	66.32	65.41
Zm00001d026177_P001	Maize	extracellular	32.64	37.9
Zm00001d002738_P001	Maize	plasma membrane	32.29	37.5
Zm00001d027652_P001	Maize	plasma membrane	31.25	36.0
Zm00001d011778_P001	Maize	plasma membrane	31.6	35.83
Zm00001d051362_P001	Maize	plasma membrane	30.56	35.34
Zm00001d017485_P002	Maize	endoplasmic reticulum, extracellular, plasma membrane	30.56	35.2
Zm00001d032610_P003	Maize	mitochondrion, plastid	30.21	32.71
Zm00001d013956_P003	Maize	plasma membrane	29.51	32.44
Zm00001d019676_P001	Maize	endoplasmic reticulum, extracellular, plastid	11.46	31.13
Zm00001d015518_P001	Maize	endoplasmic reticulum, extracellular	11.46	31.13
Zm00001d002952_P001	Maize	plasma membrane	28.12	30.57
Zm00001d037779_P001	Maize	cytosol, plasma membrane, vacuole	26.04	29.41
Zm00001d039713_P001	Maize	plasma membrane	25.35	29.32
Zm00001d039293_P001	Maize	plastid	28.12	28.22
Zm00001d020747_P001	Maize	extracellular	10.42	28.04
Zm00001d026178_P002	Maize	plastid	25.0	26.97
Zm00001d010410_P001	Maize	plasma membrane, plastid	26.04	24.12
Zm00001d048520_P014	Maize	mitochondrion	21.88	23.51

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.2	EntrezGene:541890	EMBL:AF326494	ProteinID:AQK72788.1	InterPro:Aquaporin-like
InterPro:Aquaporin_transptr	EMBL:BT063385	UniProt:C0P516	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0006833	GO:GO:0008150	GO:GO:0015250
GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	InterPro:MIP
InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF137
UniProt:Q9ATM6	SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI00000A9AF1	EnsemblPlantsGene:Zm00001d017288
EnsemblPlants:Zm00001d017288_P001	EnsemblPlants:Zm00001d017288_T001	:	:	:	:

Description

plasma membrane intrinsic protein2Aquaporin PIP2-4

Coordinates

chr5:+:191817119..191819914

Molecular Weight (calculated)

30323.7 Da

IEP (calculated)

7.024

GRAVY (calculated)

0.476

Length

288 amino acids

Sequence
(BLAST)

001: MAKDIEASGP EAGEFSAKDY TDPPPAPLID AEELTQWSLY RAVIAEFIAT LLFLYITVAT VIGYKHQTDA SASGPDAACG GVGILGIAWA FGGMIFILVY
101: CTAGISGGHI NPAVTFGLFL ARKVSLVRAL LYIIAQCLGA ICGVGLVKGF QSAYYVRYGG GANELSDGYS KGTGLAAEII GTFVLVYTVF SATDPKRSAR
201: DSHVPVLAPL PIGFAVFMVH LATIPITGTG INPARSLGAA VIYNKDKAWD DQWIFWVGPL IGAAIAAAYH QYVLRASATK LGSYRSNA

Best Arabidopsis Sequence Match ( AT2G37170.2 )
(BLAST)

001: MRALTIAIVS LYKQLSFVSS VFTNTTYPQY KTQLSYITKK VIEMAKDVEG PEGFQTRDYE DPPPTPFFDA DELTKWSLYR AVIAEFVATL LFLYITVLTV
101: IGYKIQSDTK AGGVDCGGVG ILGIAWAFGG MIFILVYCTA GISGGHINPA VTFGLFLARK VSLIRAVLYM VAQCLGAICG VGFVKAFQSS YYDRYGGGAN
201: SLADGYNTGT GLAAEIIGTF VLVYTVFSAT DPKRNARDSH VPVLAPLPIG FAVFMVHLAT IPITGTGINP ARSFGAAVIY NKSKPWDDHW IFWVGPFIGA
301: AIAAFYHQFV LRASGSKSLG SFRSAANV

Arabidopsis Description

PIP2Bplasma membrane intrinsic protein 2 [Source:TAIR;Acc:AT2G37170]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.