Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- plasma membrane 2
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
EES11105 | Sorghum | mitochondrion, plasma membrane | 92.45 | 91.42 |
TraesCS2A01G374400.1 | Wheat | plasma membrane | 75.09 | 75.09 |
Os04t0527900-01 | Rice | plastid | 74.72 | 74.72 |
TraesCS2D01G370800.1 | Wheat | plasma membrane | 73.96 | 73.96 |
TraesCS2B01G391400.1 | Wheat | extracellular, plasma membrane, vacuole | 73.96 | 73.96 |
GSMUA_Achr4P26010_001 | Banana | cytosol, golgi, plasma membrane | 62.64 | 65.35 |
GSMUA_Achr2P10640_001 | Banana | cytosol, golgi, plasma membrane | 62.26 | 64.96 |
Zm00001d013956_P003 | Maize | plasma membrane | 59.62 | 60.31 |
Zm00001d032610_P003 | Maize | mitochondrion, plastid | 59.25 | 59.02 |
VIT_16s0039g00220.t01 | Wine grape | cytosol | 56.6 | 57.92 |
KRH38823 | Soybean | nucleus | 53.96 | 56.08 |
KRH09321 | Soybean | cytosol, mitochondrion, plasma membrane | 53.21 | 55.29 |
Solyc06g072130.2.1 | Tomato | extracellular | 53.96 | 55.21 |
Solyc03g019820.2.1 | Tomato | cytosol, golgi, plasma membrane | 53.96 | 55.0 |
PGSC0003DMT400069330 | Potato | cytosol | 53.58 | 54.83 |
KRH34280 | Soybean | endoplasmic reticulum | 52.45 | 54.72 |
PGSC0003DMT400039507 | Potato | cytosol, golgi, plasma membrane | 53.58 | 54.62 |
KRG92517 | Soybean | cytosol | 52.08 | 54.33 |
Bra016014.1-P | Field mustard | cytosol | 53.58 | 53.58 |
AT1G17810.1 | Thale cress | cytosol, golgi, plasma membrane | 53.96 | 53.56 |
CDX96453 | Canola | cytosol | 53.21 | 53.21 |
CDX72962 | Canola | plasma membrane | 53.21 | 53.21 |
CDY66321 | Canola | plasma membrane | 53.21 | 53.01 |
AT1G73190.1 | Thale cress | plasma membrane | 53.58 | 52.99 |
Zm00001d027652_P001 | Maize | plasma membrane | 49.81 | 52.8 |
CDY11123 | Canola | cytosol | 52.45 | 52.45 |
CDX68239 | Canola | cytosol | 52.45 | 52.45 |
CDY19176 | Canola | plasma membrane | 52.45 | 52.06 |
Bra025947.1-P | Field mustard | cytosol, golgi, plasma membrane | 52.45 | 52.06 |
Bra008079.1-P | Field mustard | golgi, mitochondrion, plasma membrane | 52.08 | 51.88 |
CDY48045 | Canola | golgi, mitochondrion, plasma membrane | 52.08 | 51.88 |
CDY26214 | Canola | plasma membrane | 52.08 | 51.69 |
CDY21731 | Canola | golgi, mitochondrion, plasma membrane | 52.08 | 51.69 |
Bra031005.1-P | Field mustard | golgi, mitochondrion, plasma membrane | 52.08 | 51.69 |
CDX81850 | Canola | golgi, mitochondrion, plasma membrane | 51.7 | 51.31 |
Zm00001d011778_P001 | Maize | plasma membrane | 48.68 | 50.79 |
Zm00001d017485_P002 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 44.15 | 46.8 |
Zm00001d051362_P001 | Maize | plasma membrane | 43.77 | 46.59 |
Zm00001d002738_P001 | Maize | plasma membrane | 43.4 | 46.37 |
Zm00001d026177_P001 | Maize | extracellular | 43.02 | 45.97 |
Zm00001d015518_P001 | Maize | endoplasmic reticulum, extracellular | 16.98 | 42.45 |
Zm00001d019676_P001 | Maize | endoplasmic reticulum, extracellular, plastid | 16.98 | 42.45 |
Zm00001d037779_P001 | Maize | cytosol, plasma membrane, vacuole | 38.49 | 40.0 |
Zm00001d039293_P001 | Maize | plastid | 43.02 | 39.72 |
Zm00001d020747_P001 | Maize | extracellular | 15.47 | 38.32 |
Zm00001d039713_P001 | Maize | plasma membrane | 35.85 | 38.15 |
Zm00001d026178_P002 | Maize | plastid | 33.21 | 32.96 |
Zm00001d048520_P014 | Maize | mitochondrion | 32.83 | 32.46 |
Zm00001d010410_P001 | Maize | plasma membrane, plastid | 37.74 | 32.15 |
Zm00001d014285_P001 | Maize | plasma membrane | 33.21 | 31.1 |
Zm00001d003006_P001 | Maize | plasma membrane | 30.94 | 28.77 |
Zm00001d005410_P001 | Maize | plasma membrane | 30.94 | 28.67 |
Zm00001d005421_P001 | Maize | plasma membrane | 31.32 | 28.42 |
Zm00001d022608_P001 | Maize | plasma membrane | 30.57 | 28.12 |
Zm00001d019565_P001 | Maize | plasma membrane | 30.57 | 28.12 |
Zm00001d017288_P001 | Maize | plasma membrane | 30.57 | 28.12 |
Zm00001d051174_P002 | Maize | plasma membrane | 30.57 | 28.03 |
Zm00001d051872_P001 | Maize | plasma membrane | 30.19 | 27.78 |
Zm00001d019563_P006 | Maize | plasma membrane | 30.19 | 27.59 |
Zm00001d002690_P001 | Maize | plasma membrane | 29.81 | 27.43 |
Zm00001d017526_P001 | Maize | plasma membrane | 29.81 | 27.34 |
Zm00001d051403_P001 | Maize | plasma membrane | 29.81 | 27.05 |
Protein Annotations
Gene3D:1.20.1080.10 | EntrezGene:103646186 | MapMan:24.3.1.3 | UniProt:A0A1D6E5P3 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr |
GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 |
GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS |
ProteinID:ONM15784.1 | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF30 |
SUPFAM:SSF81338 | TIGRFAMs:TIGR00861 | TMHMM:TMhelix | UniParc:UPI000221698D | EnsemblPlantsGene:Zm00001d002952 | EnsemblPlants:Zm00001d002952_P001 |
EnsemblPlants:Zm00001d002952_T001 | SEG:seg | : | : | : | : |
Description
Probable aquaporin TIP3-2
Coordinates
chr2:-:27986031..27988042
Molecular Weight (calculated)
27465.6 Da
IEP (calculated)
9.305
GRAVY (calculated)
0.567
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPGRHPARR ADTTGTGPLL PDATRAVVSE FVATAMFVFA AEGSVYGLWK LYKDTATPGG LLAVAIAHTL ALVAAVAVAS NASGGHVNPA VTFGLLVGRR
101: ISFGRAAVYW LAQMLGAVVA SLLLTLVSGG TRPVGFGLVR GVHERHALLL EAVMTFGLMY AVYATAVDHR SRGGAVAIAP LAIGFVLGAN ILAGGPFDGA
201: AMNPARAFGP ALVGWSWRHH WVYWVGPLIG AGLAGGLYEF VMVEQEPEAP APAAVPRMPV ASEDY
101: ISFGRAAVYW LAQMLGAVVA SLLLTLVSGG TRPVGFGLVR GVHERHALLL EAVMTFGLMY AVYATAVDHR SRGGAVAIAP LAIGFVLGAN ILAGGPFDGA
201: AMNPARAFGP ALVGWSWRHH WVYWVGPLIG AGLAGGLYEF VMVEQEPEAP APAAVPRMPV ASEDY
001: MATSARRAYG FGRADEATHP DSIRATLAEF LSTFVFVFAG EGSILALDKL YWDTAAHTGT NTPGGLVLVA LAHALALFAA VSAAINVSGG HVNPAVTFAA
101: LIGGRISVIR AIYYWVAQLI GAILACLLLR LATNGLRPVG FHVASGVSEL HGLLMEIILT FALVYVVYST AIDPKRGSIG IIAPLAIGLI VGANILVGGP
201: FDGASMNPAR AFGPALVGWR WSNHWIYWVG PFIGGALAAL IYEYMIIPSV NEPPHHSTHQ PLAPEDY
101: LIGGRISVIR AIYYWVAQLI GAILACLLLR LATNGLRPVG FHVASGVSEL HGLLMEIILT FALVYVVYST AIDPKRGSIG IIAPLAIGLI VGANILVGGP
201: FDGASMNPAR AFGPALVGWR WSNHWIYWVG PFIGGALAAL IYEYMIIPSV NEPPHHSTHQ PLAPEDY
Arabidopsis Description
TIP3-2BETA-TIP [Source:UniProtKB/TrEMBL;Acc:A0A178WI57]
SUBAcon: [plasma membrane,golgi,cytosol]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.