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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:
  • plastid 1
  • vacuole 2
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, golgi, plasma membrane
Any Predictor:cytosol, plastid, secretory
BaCelLo:plastid
EpiLoc:vacuole
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY26214 Canola plasma membrane 99.63 99.63
CDY19176 Canola plasma membrane 97.75 97.75
Bra031005.1-P Field mustard golgi, mitochondrion, plasma membrane 94.76 94.76
AT1G17810.1 Thale cress cytosol, golgi, plasma membrane 92.13 92.13
Bra008079.1-P Field mustard golgi, mitochondrion, plasma membrane 82.4 82.71
Bra016014.1-P Field mustard cytosol 81.65 82.26
KRH09321 Soybean cytosol, mitochondrion, plasma membrane 69.29 72.55
KRH38823 Soybean nucleus 68.54 71.76
VIT_16s0039g00220.t01 Wine grape cytosol 68.54 70.66
KRH34280 Soybean endoplasmic reticulum 66.29 69.69
Solyc06g072130.2.1 Tomato extracellular 66.67 68.73
PGSC0003DMT400069330 Potato cytosol 65.92 67.95
KRG92517 Soybean cytosol 64.42 67.72
GSMUA_Achr4P26010_001 Banana cytosol, golgi, plasma membrane 64.04 67.32
Solyc03g019820.2.1 Tomato cytosol, golgi, plasma membrane 65.54 67.31
PGSC0003DMT400039507 Potato cytosol, golgi, plasma membrane 65.17 66.92
GSMUA_Achr2P10640_001 Banana cytosol, golgi, plasma membrane 63.3 66.54
Os10t0492600-01 Rice plastid 61.8 62.5
Zm00001d013956_P003 Maize plasma membrane 60.67 61.83
TraesCS1A01G165400.1 Wheat golgi, mitochondrion, plasma membrane, plastid 60.3 61.22
HORVU1Hr1G043890.2 Barley mitochondrion 59.93 60.84
TraesCS1D01G175200.1 Wheat unclear 59.93 60.84
EER94020 Sorghum golgi, mitochondrion, plasma membrane 60.3 60.53
Zm00001d032610_P003 Maize mitochondrion, plastid 60.3 60.53
TraesCS1B01G182200.1 Wheat golgi 59.55 60.46
Bra037415.1-P Field mustard cytosol 53.18 56.35
Bra025210.1-P Field mustard plasma membrane 52.81 55.73
Bra017222.1-P Field mustard cytosol 52.06 55.38
Bra032937.1-P Field mustard plasma membrane 52.43 55.34
Os04t0527900-01 Rice plastid 53.18 53.58
TraesCS2A01G374400.1 Wheat plasma membrane 52.43 52.83
TraesCS2D01G370800.1 Wheat plasma membrane 52.43 52.83
TraesCS2B01G391400.1 Wheat extracellular, plasma membrane, vacuole 52.43 52.83
EES11105 Sorghum mitochondrion, plasma membrane 52.81 52.61
Zm00001d002952_P001 Maize plasma membrane 52.06 52.45
Bra022131.1-P Field mustard extracellular 40.07 52.45
Bra027181.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 48.69 52.42
Bra026245.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 48.69 52.0
Bra001626.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 47.57 51.0
Bra021171.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 40.07 50.95
Bra024943.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 45.69 48.61
Bra034271.1-P Field mustard cytosol, plasma membrane, vacuole 45.32 48.59
EER95659 Sorghum mitochondrion 44.57 43.91
Bra018148.1-P Field mustard extracellular, plasma membrane, plastid 35.21 36.86
Bra005216.1-P Field mustard cytosol, golgi, plasma membrane 29.59 34.2
Zm00001d048520_P014 Maize mitochondrion 34.08 33.96
Bra000974.1-P Field mustard cytosol, peroxisome, plasma membrane 34.08 31.6
Bra002462.1-P Field mustard cytosol 30.71 31.54
Bra033248.1-P Field mustard cytosol, peroxisome, plasma membrane 33.71 31.47
Bra004950.1-P Field mustard cytosol, peroxisome, plasma membrane 33.71 31.47
Bra014437.1-P Field mustard plasma membrane 33.71 31.47
Bra007603.1-P Field mustard plasma membrane 33.71 31.47
Bra006997.1-P Field mustard plasma membrane 33.71 31.36
Bra032644.1-P Field mustard plasma membrane 33.33 31.12
Bra023102.1-P Field mustard plasma membrane 32.58 30.74
Bra020238.1-P Field mustard plasma membrane 32.58 30.74
Bra019307.1-P Field mustard cytosol, peroxisome, plasma membrane 32.96 30.66
Bra011585.1-P Field mustard plasma membrane 32.21 30.61
Bra023103.1-P Field mustard plasma membrane 32.58 30.53
Bra006650.1-P Field mustard plasma membrane 32.58 30.53
Bra017697.1-P Field mustard cytosol 31.84 30.25
Bra034675.1-P Field mustard cytosol, peroxisome, plasma membrane 31.46 29.89
Bra000111.1-P Field mustard plasma membrane 31.84 29.51
Bra003196.1-P Field mustard plasma membrane 31.46 29.37
Bra007100.1-P Field mustard plasma membrane 31.09 29.02
Bra005215.1-P Field mustard cytosol, peroxisome, plasma membrane 25.84 28.99
Bra039301.1-P Field mustard cytosol, peroxisome, plasma membrane 29.59 28.21
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.3InterPro:Aquaporin-likeInterPro:Aquaporin_transptrEnsemblPlantsGene:Bra025947EnsemblPlants:Bra025947.1
EnsemblPlants:Bra025947.1-PGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0015267GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:IPR023271UniProt:M4EAY8
InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783ScanProsite:PS00221PANTHER:PTHR19139
PANTHER:PTHR19139:SF30SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelixUniParc:UPI000253F36FSEG:seg
Description
AT1G17810 (E=2e-114) BETA-TIP | BETA-TIP (BETA-TONOPLAST INTRINSIC PROTEIN); water channel
Coordinates
chrA06:+:6848674..6849830
Molecular Weight (calculated)
28576.9 Da
IEP (calculated)
7.030
GRAVY (calculated)
0.564
Length
267 amino acids
Sequence
(BLAST)
001: MATYARRTYG FGRTDEATHP DSIRATLAEF LSTFVFVFAG EGSILSLDKL YWDTAAHTGI DTPGGLLLVA LAHALALFAA VSAAINVSGG HVNPAVTFAA
101: LVGGRLSVIR AIYYWVAQLL GAILACLLLR LSTNGKRPIG FHVASGVSEL HGLLMEIILT FALVYVFYST VIDPKRGSIG IIAPLAIGLI VGANMLVGGP
201: FDGASMNPAR AFGPSLVGWR WDNHWIYWVG PFIGGALAAL IYEYMIIPNV NEPPRHSVHQ PLAPEDY
Best Arabidopsis Sequence Match ( AT1G17810.1 )
(BLAST)
001: MATSARRAYG FGRADEATHP DSIRATLAEF LSTFVFVFAG EGSILALDKL YWDTAAHTGT NTPGGLVLVA LAHALALFAA VSAAINVSGG HVNPAVTFAA
101: LIGGRISVIR AIYYWVAQLI GAILACLLLR LATNGLRPVG FHVASGVSEL HGLLMEIILT FALVYVVYST AIDPKRGSIG IIAPLAIGLI VGANILVGGP
201: FDGASMNPAR AFGPALVGWR WSNHWIYWVG PFIGGALAAL IYEYMIIPSV NEPPHHSTHQ PLAPEDY
Arabidopsis Description
TIP3-2BETA-TIP [Source:UniProtKB/TrEMBL;Acc:A0A178WI57]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.