Factsheet for Bra033248.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
plastid 1
cytosol 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90046	Canola	cytosol, peroxisome, plasma membrane	99.65	99.65
Bra032644.1-P	Field mustard	plasma membrane	98.25	98.25
Bra000974.1-P	Field mustard	cytosol, peroxisome, plasma membrane	96.85	96.18
Bra014437.1-P	Field mustard	plasma membrane	93.71	93.71
Bra007603.1-P	Field mustard	plasma membrane	93.36	93.36
Bra004950.1-P	Field mustard	cytosol, peroxisome, plasma membrane	93.01	93.01
Bra019307.1-P	Field mustard	cytosol, peroxisome, plasma membrane	91.96	91.64
VIT_13s0067g00220.t01	Wine grape	plasma membrane	88.11	88.11
PGSC0003DMT400000151	Potato	cytosol, peroxisome, plasma membrane	86.71	87.02
Solyc01g094690.2.1	Tomato	nucleus	86.71	87.02
KRH59918	Soybean	peroxisome	86.71	86.41
KRH77555	Soybean	plasma membrane	86.01	86.01
KRH27918	Soybean	plasma membrane	86.01	86.01
PGSC0003DMT400012780	Potato	cytosol, peroxisome, plasma membrane	86.36	85.76
PGSC0003DMT400014809	Potato	peroxisome	86.01	85.71
Solyc08g008050.2.1	Tomato	peroxisome	86.01	85.71
KRH41192	Soybean	endoplasmic reticulum	86.36	85.47
Solyc12g056220.1.1	Tomato	plastid	86.01	85.42
Bra039301.1-P	Field mustard	cytosol, peroxisome, plasma membrane	83.22	85.0
Solyc08g081190.2.1	Tomato	plastid	84.97	84.97
PGSC0003DMT400032134	Potato	cytosol, peroxisome, plasma membrane	84.97	84.97
PGSC0003DMT400053479	Potato	plasma membrane	84.97	84.97
KRH66037	Soybean	golgi, peroxisome, plasma membrane	84.27	84.86
Solyc03g096290.2.1	Tomato	nucleus	83.92	83.92
KRH00178	Soybean	golgi, peroxisome, plasma membrane	82.17	81.88
Bra011585.1-P	Field mustard	plasma membrane	69.58	70.82
Bra034675.1-P	Field mustard	cytosol, peroxisome, plasma membrane	68.88	70.11
Bra017697.1-P	Field mustard	cytosol	68.88	70.11
Bra005216.1-P	Field mustard	cytosol, golgi, plasma membrane	56.29	69.7
Bra006997.1-P	Field mustard	plasma membrane	68.18	67.94
Bra023102.1-P	Field mustard	plasma membrane	67.13	67.84
Bra007100.1-P	Field mustard	plasma membrane	67.83	67.83
Bra003196.1-P	Field mustard	plasma membrane	67.48	67.48
Bra002462.1-P	Field mustard	cytosol	61.19	67.31
Bra006650.1-P	Field mustard	plasma membrane	66.78	67.02
Bra020238.1-P	Field mustard	plasma membrane	66.08	66.78
TraesCS2A01G407700.2	Wheat	golgi, peroxisome, plasma membrane	67.48	66.78
Bra023103.1-P	Field mustard	plasma membrane	66.43	66.67
Bra000111.1-P	Field mustard	plasma membrane	65.73	65.28
KRH75838	Soybean	golgi, peroxisome, plasma membrane	81.82	64.46
Bra005215.1-P	Field mustard	cytosol, peroxisome, plasma membrane	53.15	63.87
Bra027181.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	31.12	35.89
Bra001626.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	31.12	35.74
Bra022131.1-P	Field mustard	extracellular	24.83	34.8
Bra021171.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	25.52	34.76
Bra034271.1-P	Field mustard	cytosol, plasma membrane, vacuole	29.72	34.14
Bra026245.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	29.72	34.0
Bra032937.1-P	Field mustard	plasma membrane	30.07	33.99
Bra024943.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	29.72	33.86
Bra008079.1-P	Field mustard	golgi, mitochondrion, plasma membrane	31.47	33.83
Bra037415.1-P	Field mustard	cytosol	29.72	33.73
Bra025947.1-P	Field mustard	cytosol, golgi, plasma membrane	31.47	33.71
Bra017222.1-P	Field mustard	cytosol	29.37	33.47
Bra016014.1-P	Field mustard	cytosol	30.77	33.21
Bra025210.1-P	Field mustard	plasma membrane	29.37	33.2
Bra031005.1-P	Field mustard	golgi, mitochondrion, plasma membrane	30.42	32.58
Bra018148.1-P	Field mustard	extracellular, plasma membrane, plastid	25.87	29.02

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.2	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	EnsemblPlantsGene:Bra033248	EnsemblPlants:Bra033248.1
EnsemblPlants:Bra033248.1-P	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	UniProt:M4EWR3
InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF202	SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI0002545329	:

Description

AT1G01620 (E=9e-162) PIP1C, TMP-B, PIP1;3 | PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C); water channel

Coordinates

chrA10:-:4695745..4696784

Molecular Weight (calculated)

30522.2 Da

IEP (calculated)

9.105

GRAVY (calculated)

0.376

Length

286 amino acids

Sequence
(BLAST)

001: MEGKEEDVRV GANKFPERQP IGTSAQTDKD YKEPPPAPLF EPGELSSWSF WRAGIAEFIA TFLFLYITVL TVMGVKRAPN MCASVGIQGI AWAFGGMIFA
101: LVYCTAGISG GHINPAVTFG LFLARKLSLT RAVPYIVMQC LGAVCGAGVV KGFQPTPYQT LGGGANTVAP GYSKGSGLGA EIIGTFVLVY TVFSATDAKR
201: SARDSHVPIL APLPIGFAVF LVHLATIPIT GTGINPARSL GAAIIYNKDH SWDDHWIFWV GPFIGAALAA LYHQLVIRAI PFKTRS

Best Arabidopsis Sequence Match ( AT1G01620.1 )
(BLAST)

001: MEGKEEDVRV GANKFPERQP IGTSAQTDKD YKEPPPAPFF EPGELSSWSF YRAGIAEFIA TFLFLYITVL TVMGVKRAPN MCASVGIQGI AWAFGGMIFA
101: LVYCTAGISG GHINPAVTFG LFLARKLSLT RAVFYIVMQC LGAICGAGVV KGFQPNPYQT LGGGANTVAH GYTKGSGLGA EIIGTFVLVY TVFSATDAKR
201: SARDSHVPIL APLPIGFAVF LVHLATIPIT GTGINPARSL GAAIIYNKDH AWDDHWIFWV GPFIGAALAA LYHQLVIRAI PFKSRS

Arabidopsis Description

PIP1-3TMP-B [Source:UniProtKB/TrEMBL;Acc:A0A178WIA6]
SUBAcon: [peroxisome,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.