Factsheet for Bra002462.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 2
plasma membrane 3
extracellular 1
golgi 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31523	Canola	plasma membrane	98.85	98.85
CDY53629	Canola	cytosol	98.46	98.84
Bra006650.1-P	Field mustard	plasma membrane	96.54	88.07
Bra020238.1-P	Field mustard	plasma membrane	93.85	86.22
Bra005216.1-P	Field mustard	cytosol, golgi, plasma membrane	73.46	82.68
AT5G60660.1	Thale cress	plasma membrane	90.77	81.1
Bra023102.1-P	Field mustard	plasma membrane	81.92	75.27
Bra023103.1-P	Field mustard	plasma membrane	81.15	74.04
Bra006997.1-P	Field mustard	plasma membrane	81.15	73.52
Bra017697.1-P	Field mustard	cytosol	78.46	72.6
Bra005215.1-P	Field mustard	cytosol, peroxisome, plasma membrane	66.15	72.27
Bra011585.1-P	Field mustard	plasma membrane	78.08	72.24
Bra034675.1-P	Field mustard	cytosol, peroxisome, plasma membrane	76.92	71.17
Bra003196.1-P	Field mustard	plasma membrane	75.0	68.18
Bra007100.1-P	Field mustard	plasma membrane	75.0	68.18
Bra000111.1-P	Field mustard	plasma membrane	74.23	67.01
TraesCS5A01G332300.1	Wheat	plasma membrane	70.77	63.23
TraesCS5B01G332500.1	Wheat	plasma membrane	70.0	62.54
TraesCS5D01G338200.1	Wheat	plasma membrane	70.0	62.54
Os09t0541000-01	Rice	cytosol, plasma membrane, vacuole	69.62	62.41
Bra032644.1-P	Field mustard	plasma membrane	68.08	61.89
Zm00001d022608_P001	Maize	plasma membrane	68.46	61.81
Bra019307.1-P	Field mustard	cytosol, peroxisome, plasma membrane	68.08	61.67
Bra033248.1-P	Field mustard	cytosol, peroxisome, plasma membrane	67.31	61.19
Bra004950.1-P	Field mustard	cytosol, peroxisome, plasma membrane	66.54	60.49
Bra000974.1-P	Field mustard	cytosol, peroxisome, plasma membrane	66.92	60.42
Bra007603.1-P	Field mustard	plasma membrane	66.15	60.14
Bra014437.1-P	Field mustard	plasma membrane	65.77	59.79
HORVU5Hr1G084230.1	Barley	extracellular, golgi, mitochondrion	70.38	58.84
TraesCS7B01G096000.1	Wheat	golgi, peroxisome, plasma membrane	62.69	53.62
TraesCS7A01G191200.1	Wheat	golgi, peroxisome, plasma membrane	62.31	53.29
TraesCS4A01G286200.1	Wheat	golgi, peroxisome, plasma membrane	62.31	53.29
TraesCS7D01G192200.1	Wheat	golgi, peroxisome, plasma membrane	61.92	52.96
Bra039301.1-P	Field mustard	cytosol, peroxisome, plasma membrane	56.92	52.86
TraesCS4B01G027600.1	Wheat	plasma membrane	54.62	48.8
KXG36091	Sorghum	cytosol, peroxisome, plasma membrane	52.69	42.02
HORVU7Hr1G038940.1	Barley	golgi	31.92	40.69
Bra021171.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	30.77	38.1
Bra022131.1-P	Field mustard	extracellular	28.85	36.76
Bra037415.1-P	Field mustard	cytosol	33.85	34.92
Bra027181.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	33.08	34.68
Bra001626.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	33.08	34.54
Bra032937.1-P	Field mustard	plasma membrane	31.92	32.81
Bra025210.1-P	Field mustard	plasma membrane	31.92	32.81
Bra024943.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	31.15	32.27
Bra026245.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	30.77	32.0
Bra008079.1-P	Field mustard	golgi, mitochondrion, plasma membrane	32.69	31.95
Bra017222.1-P	Field mustard	cytosol	30.77	31.87
Bra034271.1-P	Field mustard	cytosol, plasma membrane, vacuole	29.62	30.92
Bra025947.1-P	Field mustard	cytosol, golgi, plasma membrane	31.54	30.71
Bra016014.1-P	Field mustard	cytosol	30.77	30.19
Bra031005.1-P	Field mustard	golgi, mitochondrion, plasma membrane	30.0	29.21
Bra018148.1-P	Field mustard	extracellular, plasma membrane, plastid	26.15	26.67

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.2	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	EnsemblPlantsGene:Bra002462	EnsemblPlants:Bra002462.1
EnsemblPlants:Bra002462.1-P	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR023271	UniProt:M4CE31
InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF260	SUPFAM:SSF81338	TIGRFAMs:TIGR00861	TMHMM:TMhelix	UniParc:UPI00025440E7	SEG:seg

Description

AT5G60660 (E=2e-109) PIP2F, PIP2;4 | PIP2;4 (PLASMA MEMBRANE INTRINSIC PROTEIN 2;4); water channel

Coordinates

chrA10:-:9385194..9386552

Molecular Weight (calculated)

27294.0 Da

IEP (calculated)

7.401

GRAVY (calculated)

0.425

Length

260 amino acids

Sequence
(BLAST)

001: MAKDLEVQEG GATAARDYVD PPPAPLLDME EFGKWSLYRA TDANAGGVDC GGVGILGIAW AFGGMIFVLV YCTAGVSGGH INPAVTFGLF LARKVSLVRT
101: VLYIVAQCLG AICGCGLVKA FQSSYYTRYG GGANELADGY NKGTGLGAEI IGTFVLVYTV FSATDPKRSA RDSHIPVLAP LPIGFAVFMV HLATIPITGT
201: GINPARSLGA AVIYNQEKAW DDQWIFWVGP MIGAAAAALY HQFVLRAAGI KSLGSFRSSA

Best Arabidopsis Sequence Match ( AT2G37170.1 )
(BLAST)

001: MAKDVEGPEG FQTRDYEDPP PTPFFDADEL TKWSLYRAVI AEFVATLLFL YITVLTVIGY KIQSDTKAGG VDCGGVGILG IAWAFGGMIF ILVYCTAGIS
101: GGHINPAVTF GLFLARKVSL IRAVLYMVAQ CLGAICGVGF VKAFQSSYYD RYGGGANSLA DGYNTGTGLA AEIIGTFVLV YTVFSATDPK RNARDSHVPV
201: LAPLPIGFAV FMVHLATIPI TGTGINPARS FGAAVIYNKS KPWDDHWIFW VGPFIGAAIA AFYHQFVLRA SGSKSLGSFR SAANV

Arabidopsis Description

PIP2Bplasma membrane intrinsic protein 2 [Source:TAIR;Acc:AT2G37170]
SUBAcon: [golgi,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.