Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 1
- mitochondrion 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G286200.1 | Wheat | golgi, peroxisome, plasma membrane | 86.25 | 82.57 |
| TraesCS7B01G096000.1 | Wheat | golgi, peroxisome, plasma membrane | 82.13 | 78.62 |
| HORVU7Hr1G038940.1 | Barley | golgi | 54.98 | 78.43 |
| Zm00001d022608_P001 | Maize | plasma membrane | 61.17 | 61.81 |
| Os09t0541000-01 | Rice | cytosol, plasma membrane, vacuole | 61.51 | 61.72 |
| TraesCS5B01G332500.1 | Wheat | plasma membrane | 59.11 | 59.11 |
| TraesCS6B01G398000.1 | Wheat | extracellular | 24.74 | 56.25 |
| TraesCS2B01G077700.1 | Wheat | plasma membrane | 54.64 | 55.99 |
| Bra020238.1-P | Field mustard | plasma membrane | 53.26 | 54.77 |
| Bra006650.1-P | Field mustard | plasma membrane | 53.61 | 54.74 |
| Bra002462.1-P | Field mustard | cytosol | 48.8 | 54.62 |
| CDY31523 | Canola | plasma membrane | 48.45 | 54.23 |
| TraesCS2B01G396800.1 | Wheat | golgi | 53.95 | 54.14 |
| CDY09192 | Canola | plasma membrane | 48.11 | 54.05 |
| CDX71032 | Canola | plasma membrane | 48.11 | 53.85 |
| TraesCS6B01G259000.1 | Wheat | golgi, peroxisome, plasma membrane | 52.92 | 53.85 |
| CDX88767 | Canola | plasma membrane | 48.11 | 53.85 |
| TraesCS2B01G225900.1 | Wheat | golgi | 53.61 | 53.79 |
| CDY53629 | Canola | cytosol | 47.77 | 53.67 |
| AT5G60660.1 | Thale cress | plasma membrane | 53.26 | 53.26 |
| TraesCS2B01G396700.2 | Wheat | plasma membrane | 53.61 | 52.88 |
| TraesCS4B01G362300.1 | Wheat | golgi, peroxisome, plasma membrane | 50.52 | 50.34 |
| TraesCS7B01G002000.1 | Wheat | golgi, peroxisome, plasma membrane | 48.8 | 50.0 |
| TraesCS5B01G570800.1 | Wheat | golgi, peroxisome, plasma membrane | 48.11 | 49.65 |
| TraesCS6B01G114400.1 | Wheat | golgi, peroxisome, plasma membrane | 49.83 | 49.15 |
| TraesCS2B01G425600.1 | Wheat | golgi, plasma membrane | 48.45 | 48.96 |
| TraesCS6B01G450200.1 | Wheat | plastid | 48.8 | 48.63 |
| TraesCS7B01G003800.1 | Wheat | golgi, peroxisome, plasma membrane | 48.11 | 48.44 |
| TraesCS6B01G450000.1 | Wheat | unclear | 48.45 | 48.29 |
| TraesCS5B01G178700.1 | Wheat | plasma membrane | 48.45 | 48.29 |
| TraesCS6B01G279200.1 | Wheat | plastid | 48.11 | 48.28 |
| TraesCS7B01G003900.1 | Wheat | golgi, peroxisome, plasma membrane | 48.11 | 48.11 |
| TraesCS2B01G605900.1 | Wheat | golgi, peroxisome, plasma membrane | 47.77 | 48.1 |
| TraesCS5B01G567500.1 | Wheat | golgi, peroxisome, plasma membrane | 47.42 | 47.75 |
| TraesCS5B01G567600.1 | Wheat | golgi, peroxisome, plasma membrane | 47.42 | 47.42 |
| KXG36091 | Sorghum | cytosol, peroxisome, plasma membrane | 48.45 | 43.25 |
| TraesCS3B01G182200.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 24.4 | 28.29 |
| TraesCS2B01G433200.1 | Wheat | plasma membrane | 23.71 | 27.82 |
| TraesCS6B01G275100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 23.71 | 27.71 |
| TraesCS4B01G349500.1 | Wheat | plasma membrane | 23.71 | 27.06 |
| TraesCS7B01G243000.1 | Wheat | plasma membrane | 23.02 | 27.02 |
| TraesCS3B01G608500.1 | Wheat | plasma membrane | 23.02 | 26.59 |
| TraesCS2B01G391400.1 | Wheat | extracellular, plasma membrane, vacuole | 23.71 | 26.04 |
| TraesCS4B01G310900.1 | Wheat | unclear | 21.99 | 25.6 |
| TraesCS3B01G182400.1 | Wheat | plasma membrane | 21.31 | 25.0 |
| TraesCS1B01G182200.1 | Wheat | golgi | 22.34 | 24.71 |
| TraesCS2B01G433300.1 | Wheat | endoplasmic reticulum | 19.24 | 22.58 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.2 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0055085 |
| InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 |
| PANTHER:PTHR19139 | PANTHER:PTHR19139:SF160 | SUPFAM:SSF81338 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS4B01G027600 | EnsemblPlants:TraesCS4B01G027600.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr4B:+:20727523..20728887
Molecular Weight (calculated)
30625.1 Da
IEP (calculated)
7.815
GRAVY (calculated)
0.486
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAKEVEKVV TADEETTDIV VHRVPYGDPP AVRALDTSEL TTWSLYRALI GEFTASLVLL YVSIATVIGY RSQSSAPDDR CTGVGYLGVA WSFGATVSVL
101: VYSTSGISGG HINPAVTFAL FMAGKVTLVR SVLYVAAQCL GAVVGVGIVK GIMKHPYDDL GGGANAVAGG YSLGAALGAE TLGTFVLAYA VFSATDPKRT
201: ARDAFVPLVA ALPIGMAVFV VHLATIPITG TGINPARSLG AAVLYNQHKT WKQHCTCLYS TIVSSLQVGP MPCRCHFSHI RCHVGTFYVY E
101: VYSTSGISGG HINPAVTFAL FMAGKVTLVR SVLYVAAQCL GAVVGVGIVK GIMKHPYDDL GGGANAVAGG YSLGAALGAE TLGTFVLAYA VFSATDPKRT
201: ARDAFVPLVA ALPIGMAVFV VHLATIPITG TGINPARSLG AAVLYNQHKT WKQHCTCLYS TIVSSLQVGP MPCRCHFSHI RCHVGTFYVY E
001: MSKEVSEEGR HGKDYVDPPP APLLDMAELK LWSFYRAIIA EFIATLLFLY VTVATVIGHK NQTGPCGGVG LLGIAWAFGG MIFVLVYCTA GISGGHINPA
101: VTFGLFLARK VSLPRAVAYM VAQCLGAICG VGLVKAFMMT PYKRLGGGAN TVADGYSTGT ALGAEIIGTF VLVYTVFSAT DPKRSARDSH VPVLAPLPIG
201: FAVFMVHLAT IPITGTGINP ARSFGAAVIY NNEKAWDDHW IFWVGPFVGA LAAAAYHQYI LRAAAIKALA SFRSNPTN
101: VTFGLFLARK VSLPRAVAYM VAQCLGAICG VGLVKAFMMT PYKRLGGGAN TVADGYSTGT ALGAEIIGTF VLVYTVFSAT DPKRSARDSH VPVLAPLPIG
201: FAVFMVHLAT IPITGTGINP ARSFGAAVIY NNEKAWDDHW IFWVGPFVGA LAAAAYHQYI LRAAAIKALA SFRSNPTN
Arabidopsis Description
PIP2-8Probable aquaporin PIP2-8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVX8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.