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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX88767 Canola plasma membrane 98.08 98.08
CDY31523 Canola plasma membrane 96.15 96.15
CDY53629 Canola cytosol 95.77 96.14
CDY09192 Canola plasma membrane 95.77 96.14
Bra006650.1-P Field mustard plasma membrane 98.46 89.82
CDY70391 Canola extracellular, golgi 52.69 86.16
AT5G60660.1 Thale cress plasma membrane 92.31 82.47
CDY46758 Canola plasma membrane 83.08 76.33
CDY66912 Canola extracellular 60.0 75.73
CDY46759 Canola plasma membrane 82.69 75.44
CDX91341 Canola plasma membrane 82.69 75.44
CDX91340 Canola plasma membrane 82.69 75.44
CDY56697 Canola plasma membrane 83.08 75.26
CDX78177 Canola plasma membrane 82.69 74.91
CDY13298 Canola plasma membrane 82.31 74.56
CDX69112 Canola plasma membrane 77.69 71.89
CDY52648 Canola plasma membrane 77.69 71.89
CDX76314 Canola cytosol 77.69 71.89
CDX74983 Canola cytosol, peroxisome, plasma membrane 54.23 71.57
CDX72515 Canola golgi, plasma membrane 69.62 71.26
CDY17511 Canola plasma membrane 76.92 71.17
CDX89115 Canola plasma membrane 60.77 70.22
CDY07519 Canola plasma membrane 76.92 69.93
CDX67611 Canola plasma membrane 76.92 69.93
CDX74984 Canola cytosol, peroxisome, plasma membrane 82.69 69.35
CDX78265 Canola plasma membrane 75.77 68.88
CDX73446 Canola peroxisome 75.38 68.53
CDY07681 Canola plasma membrane 75.77 68.4
CDY14415 Canola cytosol, peroxisome, plasma membrane 75.0 67.71
CDX94185 Canola plasma membrane 68.85 62.37
CDY10936 Canola plasma membrane 68.85 62.37
CDX90046 Canola cytosol, peroxisome, plasma membrane 68.08 61.89
CDY38017 Canola plasma membrane 68.08 61.89
TraesCS5A01G332300.1 Wheat plasma membrane 69.23 61.86
Os09t0541000-01 Rice cytosol, plasma membrane, vacuole 68.46 61.38
CDY18886 Canola cytosol, peroxisome, plasma membrane 67.31 61.19
CDY37078 Canola cytosol, peroxisome, plasma membrane 67.31 61.19
CDX83385 Canola cytosol, peroxisome, plasma membrane 67.31 61.19
CDY27346 Canola cytosol, peroxisome, plasma membrane 67.31 61.19
CDX74777 Canola cytosol, peroxisome, plasma membrane 67.31 61.19
CDY51161 Canola cytosol, peroxisome, plasma membrane 67.31 61.19
TraesCS5B01G332500.1 Wheat plasma membrane 68.46 61.17
TraesCS5D01G338200.1 Wheat plasma membrane 68.46 61.17
CDY07221 Canola cytosol, peroxisome, plasma membrane 66.92 60.84
CDY48920 Canola plasma membrane 66.92 60.84
CDX71738 Canola plasma membrane 66.92 60.84
CDX95670 Canola cytosol, peroxisome, plasma membrane 66.92 60.84
Zm00001d022608_P001 Maize plasma membrane 67.31 60.76
CDX74334 Canola cytosol, peroxisome, plasma membrane 67.31 60.76
CDX91911 Canola cytosol, peroxisome, plasma membrane 66.92 60.42
HORVU5Hr1G084230.1 Barley extracellular, golgi, mitochondrion 68.85 57.56
CDY15165 Canola plastid 68.08 54.63
TraesCS7B01G096000.1 Wheat golgi, peroxisome, plasma membrane 61.15 52.3
TraesCS7A01G191200.1 Wheat golgi, peroxisome, plasma membrane 60.77 51.97
TraesCS7D01G192200.1 Wheat golgi, peroxisome, plasma membrane 60.38 51.64
TraesCS4A01G286200.1 Wheat golgi, peroxisome, plasma membrane 60.38 51.64
TraesCS4B01G027600.1 Wheat plasma membrane 53.85 48.11
KXG36091 Sorghum cytosol, peroxisome, plasma membrane 52.69 42.02
HORVU7Hr1G038940.1 Barley golgi 31.15 39.71
CDY28932 Canola endoplasmic reticulum, extracellular, vacuole 30.38 37.62
CDY67380 Canola plastid 30.0 35.29
CDY66645 Canola plastid 30.0 35.29
CDY30146 Canola endoplasmic reticulum, extracellular, plasma membrane 33.46 35.08
CDX97733 Canola endoplasmic reticulum, extracellular 33.46 35.08
CDY63821 Canola endoplasmic reticulum, plasma membrane, vacuole 33.46 34.94
CDY20190 Canola endoplasmic reticulum, plasma membrane, vacuole 33.46 34.94
CDX82410 Canola plasma membrane 33.08 34.54
CDY07142 Canola cytosol 33.08 34.13
CDY69446 Canola cytosol 33.08 34.13
CDY35336 Canola extracellular 18.46 33.57
CDY28539 Canola plasma membrane 32.31 33.2
CDX83623 Canola golgi, plasma membrane, plastid 32.31 33.2
CDY48983 Canola plasma membrane 32.31 33.2
CDY13639 Canola plasma membrane 32.31 33.2
CDY51678 Canola plasma membrane, vacuole 31.92 33.2
CDY59296 Canola endoplasmic reticulum, plasma membrane, vacuole 31.92 33.07
CDX77768 Canola endoplasmic reticulum, plasma membrane, vacuole 31.92 33.07
CDY64499 Canola endoplasmic reticulum, plasma membrane, vacuole 31.54 32.8
CDY65121 Canola endoplasmic reticulum, plasma membrane, vacuole 31.54 32.8
CDY53270 Canola plasma membrane 31.54 32.67
CDY66321 Canola plasma membrane 33.08 32.33
CDY47816 Canola endoplasmic reticulum, plasma membrane, vacuole 31.15 32.02
CDX77009 Canola cytosol, plasma membrane, vacuole 30.38 31.73
CDY48045 Canola golgi, mitochondrion, plasma membrane 32.31 31.58
CDX75873 Canola extracellular, golgi, vacuole 32.69 30.91
CDX68239 Canola cytosol 31.15 30.57
CDY11123 Canola cytosol 31.15 30.57
CDY26214 Canola plasma membrane 31.15 30.34
CDX96453 Canola cytosol 30.77 30.19
CDY19176 Canola plasma membrane 30.77 29.96
CDX72962 Canola plasma membrane 30.38 29.81
CDX81850 Canola golgi, mitochondrion, plasma membrane 29.62 28.84
CDY21731 Canola golgi, mitochondrion, plasma membrane 29.62 28.84
CDY66913 Canola cytosol, mitochondrion, nucleus 5.0 28.26
CDY47413 Canola mitochondrion, plastid 26.15 26.36
CDX99048 Canola mitochondrion, plastid 25.77 25.97
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.2GO:A0A078C2R0InterPro:Aquaporin-likeInterPro:Aquaporin_transptrEnsemblPlants:CDX71032
ProteinID:CDX71032ProteinID:CDX71032.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00140975001InterPro:IPR023271
InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783ScanProsite:PS00221PANTHER:PTHR19139
PANTHER:PTHR19139:SF260SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelixUniParc:UPI0004EF421ASEG:seg
Description
BnaC03g11160D
Coordinates
chrLK031791:+:3364069..3365728
Molecular Weight (calculated)
27407.2 Da
IEP (calculated)
7.878
GRAVY (calculated)
0.398
Length
260 amino acids
Sequence
(BLAST)
001: MAKDLEVQEG GATAARDYQD PPPAPLFDME ELGKWSLYRA TDANAGGVDC GGVGILGIAW AFGGMIFVLV YCTAGISGGH INPAVTVGLF LARKVSLVRT
101: VLYIVAQCLG AICGCGLVKA FQSSYYTRYG GGANQLADGY NKGTGLGAEI IGTFVLVYTV FSATDPKRSA RDSHIPVLAP LPIGFAVFMV HLATIPITGT
201: GINPARSFGA AVIYNHEKAW DDQWIFWVGP MIGAAAAALY HQFVLRAAGI KSLGSFRSYA
Best Arabidopsis Sequence Match ( AT5G60660.1 )
(BLAST)
001: MAKDLDVNES GPPAARDYKD PPPAPFFDME ELRKWPLYRA VIAEFVATLL FLYVSILTVI GYKAQTDATA GGVDCGGVGI LGIAWAFGGM IFVLVYCTAG
101: ISGGHINPAV TVGLFLARKV SLVRTVLYIV AQCLGAICGC GFVKAFQSSY YTRYGGGANE LADGYNKGTG LGAEIIGTFV LVYTVFSATD PKRNARDSHV
201: PVLAPLPIGF AVFMVHLATI PITGTGINPA RSFGAAVIYN NEKAWDDQWI FWVGPMIGAA AAAFYHQFIL RAAAIKALGS FGSFGSFRSF A
Arabidopsis Description
PIP2-4PIP2F [Source:UniProtKB/TrEMBL;Acc:A0A178UG45]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.