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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, plasma membrane, peroxisome

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • extracellular 1
  • golgi 1
  • plasma membrane 2
  • endoplasmic reticulum 1
  • vacuole 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra000974.1-P Field mustard cytosol, peroxisome, plasma membrane 99.65 99.65
CDX74334 Canola cytosol, peroxisome, plasma membrane 99.65 99.65
CDY51161 Canola cytosol, peroxisome, plasma membrane 98.61 99.3
CDY07221 Canola cytosol, peroxisome, plasma membrane 97.92 98.6
CDY66913 Canola cytosol, mitochondrion, nucleus 15.62 97.83
CDX90046 Canola cytosol, peroxisome, plasma membrane 96.53 97.2
CDY38017 Canola plasma membrane 95.14 95.8
CDX71738 Canola plasma membrane 93.75 94.41
CDY27346 Canola cytosol, peroxisome, plasma membrane 93.75 94.41
CDY37078 Canola cytosol, peroxisome, plasma membrane 93.75 94.41
CDX74777 Canola cytosol, peroxisome, plasma membrane 93.4 94.06
CDY48920 Canola plasma membrane 93.4 94.06
CDX89115 Canola plasma membrane 73.26 93.78
CDX83385 Canola cytosol, peroxisome, plasma membrane 93.06 93.71
CDY18886 Canola cytosol, peroxisome, plasma membrane 93.06 93.71
CDX95670 Canola cytosol, peroxisome, plasma membrane 92.71 93.36
CDY66912 Canola extracellular 65.97 92.23
CDY10936 Canola plasma membrane 91.67 91.99
CDX94185 Canola plasma membrane 90.62 90.94
GSMUA_Achr5P12400_001 Banana extracellular 59.03 89.47
VIT_13s0067g00220.t01 Wine grape plasma membrane 87.85 88.46
GSMUA_AchrUn_... Banana extracellular 58.33 88.42
TraesCS6B01G398000.1 Wheat extracellular 39.24 88.28
Os04t0559700-01 Rice plasma membrane 86.81 86.81
PGSC0003DMT400000151 Potato cytosol, peroxisome, plasma membrane 85.76 86.67
Solyc01g094690.2.1 Tomato nucleus 85.76 86.67
TraesCS2B01G425600.1 Wheat golgi, plasma membrane 86.46 86.46
KRH59918 Soybean peroxisome 85.76 86.06
KRH66037 Soybean golgi, peroxisome, plasma membrane 84.72 85.92
TraesCS6B01G279200.1 Wheat plastid 86.46 85.86
GSMUA_Achr8P11540_001 Banana extracellular 56.6 85.79
Solyc08g008050.2.1 Tomato peroxisome 85.42 85.71
PGSC0003DMT400053479 Potato plasma membrane 85.07 85.66
EES07484 Sorghum plasma membrane 85.76 85.47
Zm00001d017526_P001 Maize plasma membrane 85.76 85.47
PGSC0003DMT400012780 Potato cytosol, peroxisome, plasma membrane 85.42 85.42
KRH77555 Soybean plasma membrane 84.72 85.31
GSMUA_AchrUn_... Banana extracellular 56.25 85.26
CDY15165 Canola plastid 95.83 85.19
HORVU6Hr1G064140.1 Barley golgi, peroxisome, plasma membrane 85.76 85.17
KRH41192 Soybean endoplasmic reticulum 85.42 85.12
Solyc12g056220.1.1 Tomato plastid 85.07 85.07
Zm00001d002690_P001 Maize plasma membrane 85.07 85.07
PGSC0003DMT400014809 Potato peroxisome 84.72 85.02
KRH27918 Soybean plasma membrane 84.38 84.97
Solyc08g081190.2.1 Tomato plastid 84.38 84.97
Zm00001d051403_P001 Maize plasma membrane 86.11 84.93
TraesCS6D01G227500.1 Wheat golgi 85.42 84.83
TraesCS2B01G605900.1 Wheat golgi, peroxisome, plasma membrane 85.07 84.78
EES11257 Sorghum cytosol, peroxisome, plasma membrane 84.72 84.72
Solyc03g096290.2.1 Tomato nucleus 84.03 84.62
PGSC0003DMT400032134 Potato cytosol, peroxisome, plasma membrane 83.68 84.27
Os02t0666200-01 Rice plasma membrane 84.38 84.08
TraesCS5B01G178700.1 Wheat plasma membrane 85.07 83.9
TraesCS5D01G185400.1 Wheat plasma membrane 85.07 83.9
TraesCS6B01G450200.1 Wheat plastid 85.07 83.9
TraesCS6D01G389500.1 Wheat plasma membrane 85.07 83.9
KRH00178 Soybean golgi, peroxisome, plasma membrane 83.33 83.62
TraesCS6B01G450000.1 Wheat unclear 84.38 83.22
TraesCS6D01G389400.1 Wheat plasma membrane 84.38 83.22
Zm00001d051872_P001 Maize plasma membrane 82.64 82.64
OQU85985 Sorghum cytosol, peroxisome, plasma membrane 81.25 80.69
HORVU5Hr1G055200.4 Barley golgi, plastid 84.72 78.46
EER89434 Sorghum peroxisome 80.21 78.04
TraesCS2D01G404800.2 Wheat golgi, peroxisome, plasma membrane 79.51 72.93
CDX69112 Canola plasma membrane 69.79 71.53
CDX76314 Canola cytosol 69.79 71.53
CDY52648 Canola plasma membrane 69.79 71.53
CDY17511 Canola plasma membrane 69.44 71.17
CDY70391 Canola extracellular, golgi 39.24 71.07
CDX72515 Canola golgi, plasma membrane 61.11 69.29
CDX67611 Canola plasma membrane 68.4 68.88
CDY07519 Canola plasma membrane 68.4 68.88
CDX78265 Canola plasma membrane 67.71 68.18
CDX78177 Canola plasma membrane 67.71 67.94
CDY56697 Canola plasma membrane 67.71 67.94
CDX73446 Canola peroxisome 67.36 67.83
CDY13298 Canola plasma membrane 67.36 67.6
CDY46758 Canola plasma membrane 66.32 67.49
CDX91340 Canola plasma membrane 66.67 67.37
CDY46759 Canola plasma membrane 66.67 67.37
CDY09192 Canola plasma membrane 60.42 67.18
CDX71032 Canola plasma membrane 60.42 66.92
TraesCS2A01G407700.2 Wheat golgi, peroxisome, plasma membrane 67.01 66.78
CDX88767 Canola plasma membrane 60.07 66.54
CDX91341 Canola plasma membrane 65.62 66.32
CDY31523 Canola plasma membrane 59.38 65.77
CDX74983 Canola cytosol, peroxisome, plasma membrane 44.79 65.48
CDY14415 Canola cytosol, peroxisome, plasma membrane 65.28 65.28
CDY53629 Canola cytosol 58.68 65.25
KRH75838 Soybean golgi, peroxisome, plasma membrane 81.94 65.01
CDY07681 Canola plasma membrane 64.93 64.93
CDX74984 Canola cytosol, peroxisome, plasma membrane 66.67 61.94
CDY63821 Canola endoplasmic reticulum, plasma membrane, vacuole 31.94 36.95
CDX82410 Canola plasma membrane 31.6 36.55
CDY20190 Canola endoplasmic reticulum, plasma membrane, vacuole 31.6 36.55
CDX97733 Canola endoplasmic reticulum, extracellular 31.25 36.29
CDY30146 Canola endoplasmic reticulum, extracellular, plasma membrane 31.25 36.29
CDY66321 Canola plasma membrane 32.29 34.96
CDY07142 Canola cytosol 30.21 34.52
CDY69446 Canola cytosol 30.21 34.52
CDY64499 Canola endoplasmic reticulum, plasma membrane, vacuole 29.86 34.4
CDY65121 Canola endoplasmic reticulum, plasma membrane, vacuole 29.86 34.4
CDX68239 Canola cytosol 31.6 34.34
CDY11123 Canola cytosol 31.6 34.34
CDY28932 Canola endoplasmic reticulum, extracellular, vacuole 25.0 34.29
CDY48045 Canola golgi, mitochondrion, plasma membrane 31.6 34.21
CDX77009 Canola cytosol, plasma membrane, vacuole 29.51 34.14
CDY28539 Canola plasma membrane 29.86 33.99
CDY48983 Canola plasma membrane 29.86 33.99
CDY66645 Canola plastid 26.04 33.94
CDY67380 Canola plastid 26.04 33.94
CDY47816 Canola endoplasmic reticulum, plasma membrane, vacuole 29.51 33.6
CDX96453 Canola cytosol 30.9 33.58
CDY53270 Canola plasma membrane 29.17 33.47
CDX81850 Canola golgi, mitochondrion, plasma membrane 30.9 33.33
CDY19176 Canola plasma membrane 30.9 33.33
CDY21731 Canola golgi, mitochondrion, plasma membrane 30.9 33.33
CDY26214 Canola plasma membrane 30.9 33.33
CDX72962 Canola plasma membrane 30.56 33.21
CDX83623 Canola golgi, plasma membrane, plastid 29.17 33.2
CDY13639 Canola plasma membrane 29.17 33.2
CDX77768 Canola endoplasmic reticulum, plasma membrane, vacuole 28.82 33.07
CDY59296 Canola endoplasmic reticulum, plasma membrane, vacuole 28.82 33.07
CDY35336 Canola extracellular 16.32 32.87
CDY51678 Canola plasma membrane, vacuole 28.47 32.8
CDX75873 Canola extracellular, golgi, vacuole 31.25 32.73
CDY47413 Canola mitochondrion, plastid 26.39 29.46
CDX99048 Canola mitochondrion, plastid 26.04 29.07
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.2GO:A0A078DRI9InterPro:Aquaporin-likeInterPro:Aquaporin_transptrEnsemblPlants:CDX91911
ProteinID:CDX91911ProteinID:CDX91911.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00153540001InterPro:IPR023271
InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783ScanProsite:PS00221PANTHER:PTHR19139
PANTHER:PTHR19139:SF202SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelixUniParc:UPI0004EEF5D0:
Description
BnaC03g32130D
Coordinates
chrLK031870:+:776037..777673
Molecular Weight (calculated)
30736.5 Da
IEP (calculated)
9.318
GRAVY (calculated)
0.378
Length
288 amino acids
Sequence
(BLAST)
001: MEGKEEDVRV GANKFPERQP IGTSAQSDKD YKEPPPAPLF EPGELSSWSF WRAGIAEFIA TFLFLYITVL TVMGVKRAPN MCASVGIQGI AWAFGGMIFA
101: LVYCTAGISG GHINPAVTFG LFLARKLSLT RAVFYMIMQC LGAVCGAGVV KGFQPTPYQT LGGGANTVAP GYSKGSGLGA EIIGTFVLVY TVFSATDAKR
201: SARDSHVPIL APLPIGFAVF LVHLATIPIT GTGINPARSL GAAIIYNKDH SWDDHWIFWV GPFIGAALAA LYHTIVIRAI PFKSKSKS
Best Arabidopsis Sequence Match ( AT4G00430.1 )
(BLAST)
001: MEGKEEDVRV GANKFPERQP IGTSAQSTDK DYKEPPPAPL FEPGELSSWS FYRAGIAEFI ATFLFLYITV LTVMGVKRAP NMCASVGIQG IAWAFGGMIF
101: ALVYCTAGIS GGHINPAVTF GLFLARKLSL TRAVFYMIMQ CLGAICGAGV VKGFQPTPYQ TLGGGANTVA HGYTKGSGLG AEIIGTFVLV YTVFSATDAK
201: RSARDSHVPI LAPLPIGFAV FLVHLATIPI TGTGINPARS LGAAIIYNKD HSWDDHWIFW VGPFIGAALA ALYHQIVIRA IPFKSKS
Arabidopsis Description
PIP1.4TMP-C [Source:UniProtKB/TrEMBL;Acc:A0A178USZ7]
SUBAcon: [golgi,plasma membrane,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.