Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, extracellular

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 4
  • plastid 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, golgi
Any Predictor:cytosol, secretory
BaCelLo:secretory
iPSORT:plastid
MultiLoc:golgi
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:extracellular
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX67611
CDX69112
CDX71738
CDX72515
CDX73446
CDX76314
CDX78265
CDX89115
CDX94185
CDX97739
CDY07519
CDY10936
CDY17511
CDY30157
CDY48920
CDY52648
CDY66912
CDY66913

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G37180.1 CDX97739 AT3G16310.1 21798944
AT2G37180.1 CDY30157 AT3G16310.1 21798944
AT2G37180.1 CDX67611 AT3G54820.1 21798944
AT2G37180.1 CDX73446 AT3G54820.1 21798944
AT2G37180.1 CDX78265 AT3G54820.1 21798944
AT2G37180.1 CDY07519 AT3G54820.1 21798944
AT2G37180.1 CDX71738 AT3G61430.1 21798944
AT2G37180.1 CDX89115 AT3G61430.1 21798944
AT2G37180.1 CDY48920 AT3G61430.1 21798944
AT2G37180.1 CDY66912 AT3G61430.1 21798944
AT2G37180.1 CDY66913 AT3G61430.1 21798944
AT2G37180.1 CDX94185 AT4G23400.1 21798944
AT2G37180.1 CDY10936 AT4G23400.1 21798944
AT2G37180.1 CDX69112 AT4G35100.1 21798944
AT2G37180.1 CDX72515 AT4G35100.1 21798944
AT2G37180.1 CDX76314 AT4G35100.1 21798944
AT2G37180.1 CDY17511 AT4G35100.1 21798944
AT2G37180.1 CDY52648 AT4G35100.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX91340 Canola plasma membrane 99.37 55.44
CDY46759 Canola plasma membrane 99.37 55.44
CDY46758 Canola plasma membrane 98.11 55.12
CDX91341 Canola plasma membrane 98.74 55.09
CDY66912 Canola extracellular 70.44 54.37
CDX78177 Canola plasma membrane 98.11 54.36
CDY56697 Canola plasma membrane 98.11 54.36
AT2G37180.1 Thale cress plasma membrane 95.6 53.33
CDY13298 Canola plasma membrane 96.23 53.31
CDX71032 Canola plasma membrane 86.16 52.69
CDY31523 Canola plasma membrane 86.16 52.69
CDX88767 Canola plasma membrane 86.16 52.69
CDY09192 Canola plasma membrane 85.53 52.51
CDY53629 Canola cytosol 84.28 51.74
CDX74984 Canola cytosol, peroxisome, plasma membrane 99.37 50.97
CDX89115 Canola plasma membrane 71.07 50.22
CDX72515 Canola golgi, plasma membrane 79.87 50.0
AT2G37170.2 Thale cress plasma membrane 98.11 47.56
EER98451 Sorghum plasma membrane 86.16 47.24
PGSC0003DMT400027154 Potato plasma membrane 83.02 46.98
TraesCS2A01G198500.1 Wheat plasma membrane 85.53 46.9
Zm00001d019563_P006 Maize plasma membrane 85.53 46.9
Solyc10g084120.1.1 Tomato nucleus 82.39 46.62
TraesCS2D01G206300.1 Wheat golgi 84.91 46.55
TraesCS2B01G225900.1 Wheat golgi 84.91 46.55
Os07t0448800-01 Rice plasma membrane 84.28 46.21
CDX67611 Canola plasma membrane 83.02 46.15
CDY07519 Canola plasma membrane 83.02 46.15
CDX78265 Canola plasma membrane 83.02 46.15
CDX73446 Canola peroxisome 82.39 45.8
CDY52648 Canola plasma membrane 80.5 45.55
CDX69112 Canola plasma membrane 80.5 45.55
Zm00001d005421_P001 Maize plasma membrane 83.65 45.55
CDY17511 Canola plasma membrane 79.25 44.84
CDX76314 Canola cytosol 79.25 44.84
CDY07681 Canola plasma membrane 80.5 44.44
CDY14415 Canola cytosol, peroxisome, plasma membrane 79.87 44.1
HORVU2Hr1G038740.1 Barley golgi, mitochondrion, plasma membrane 85.53 39.88
CDY51161 Canola cytosol, peroxisome, plasma membrane 71.7 39.86
CDY38017 Canola plasma membrane 71.7 39.86
CDX74334 Canola cytosol, peroxisome, plasma membrane 71.7 39.58
CDY48920 Canola plasma membrane 71.07 39.51
CDX71738 Canola plasma membrane 71.07 39.51
CDY07221 Canola cytosol, peroxisome, plasma membrane 71.07 39.51
CDX90046 Canola cytosol, peroxisome, plasma membrane 71.07 39.51
CDY10936 Canola plasma membrane 71.07 39.37
CDX94185 Canola plasma membrane 71.07 39.37
CDX91911 Canola cytosol, peroxisome, plasma membrane 71.07 39.24
CDY18886 Canola cytosol, peroxisome, plasma membrane 70.44 39.16
CDX95670 Canola cytosol, peroxisome, plasma membrane 70.44 39.16
CDX74777 Canola cytosol, peroxisome, plasma membrane 70.44 39.16
CDY27346 Canola cytosol, peroxisome, plasma membrane 70.44 39.16
CDY37078 Canola cytosol, peroxisome, plasma membrane 70.44 39.16
CDX83385 Canola cytosol, peroxisome, plasma membrane 70.44 39.16
CDX74983 Canola cytosol, peroxisome, plasma membrane 44.03 35.53
CDY15165 Canola plastid 72.33 35.49
CDY35336 Canola extracellular 30.19 33.57
CDY28932 Canola endoplasmic reticulum, extracellular, vacuole 31.45 23.81
CDY30146 Canola endoplasmic reticulum, extracellular, plasma membrane 36.48 23.39
CDX97733 Canola endoplasmic reticulum, extracellular 36.48 23.39
CDY69446 Canola cytosol 35.85 22.62
CDY07142 Canola cytosol 35.85 22.62
CDY66321 Canola plasma membrane 37.74 22.56
CDY20190 Canola endoplasmic reticulum, plasma membrane, vacuole 35.22 22.49
CDX82410 Canola plasma membrane 35.22 22.49
CDY63821 Canola endoplasmic reticulum, plasma membrane, vacuole 35.22 22.49
CDY67380 Canola plastid 30.82 22.17
CDY66645 Canola plastid 30.82 22.17
CDX96453 Canola cytosol 36.48 21.89
CDX72962 Canola plasma membrane 36.48 21.89
CDY48045 Canola golgi, mitochondrion, plasma membrane 36.48 21.8
CDY47816 Canola endoplasmic reticulum, plasma membrane, vacuole 34.59 21.74
CDX68239 Canola cytosol 35.85 21.51
CDY11123 Canola cytosol 35.85 21.51
CDY26214 Canola plasma membrane 35.85 21.35
CDX77009 Canola cytosol, plasma membrane, vacuole 33.33 21.29
CDY19176 Canola plasma membrane 35.22 20.97
CDY64499 Canola endoplasmic reticulum, plasma membrane, vacuole 32.7 20.8
CDY65121 Canola endoplasmic reticulum, plasma membrane, vacuole 32.7 20.8
CDY21731 Canola golgi, mitochondrion, plasma membrane 34.59 20.6
CDX81850 Canola golgi, mitochondrion, plasma membrane 34.59 20.6
CDY48983 Canola plasma membrane 32.7 20.55
CDY28539 Canola plasma membrane 32.7 20.55
CDX75873 Canola extracellular, golgi, vacuole 35.22 20.36
CDY13639 Canola plasma membrane 32.08 20.16
CDX83623 Canola golgi, plasma membrane, plastid 32.08 20.16
CDY51678 Canola plasma membrane, vacuole 31.45 20.0
CDY59296 Canola endoplasmic reticulum, plasma membrane, vacuole 31.45 19.92
CDY53270 Canola plasma membrane 31.45 19.92
CDX77768 Canola endoplasmic reticulum, plasma membrane, vacuole 31.45 19.92
CDX99048 Canola mitochondrion, plastid 25.79 15.89
CDY47413 Canola mitochondrion, plastid 25.16 15.5
CDY66913 Canola cytosol, mitochondrion, nucleus 0.0 0.0
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.2GO:A0A078JY48UniProt:A0A078JY48InterPro:Aquaporin-likeInterPro:Aquaporin_transptr
EnsemblPlants:CDY70391ProteinID:CDY70391ProteinID:CDY70391.1GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0016021GO:GO:0055085
EnsemblPlantsGene:GSBRNA2T00098470001InterPro:IPR023271InterPro:MIPPFAM:PF00230PRINTS:PR00783PANTHER:PTHR19139
PANTHER:PTHR19139:SF260SUPFAM:SSF81338TMHMM:TMhelixUniParc:UPI0004EE1434::
Description
BnaC03g72010DBnaC03g72010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JY48]
Coordinates
chrLK041958:+:93..1013
Molecular Weight (calculated)
16800.2 Da
IEP (calculated)
9.076
GRAVY (calculated)
0.459
Length
159 amino acids
Sequence
(BLAST)
001: MVAQCLGAIC GVGFVKAFQS SYYVRYGGGA NSLADGYSTG TGLAAEIIGT FVLVYTVFSA TDPKRNARDS HVPVLAPLPI GFAVFMVHLA TIPITGTGIN
101: PARSFGAAVI YNESKPWDDH WIFWVGPFIG AAIAAFYHQF VLRASGSKSL GSFRSAANV
Best Arabidopsis Sequence Match ( AT2G37170.1 )
(BLAST)
001: MAKDVEGPEG FQTRDYEDPP PTPFFDADEL TKWSLYRAVI AEFVATLLFL YITVLTVIGY KIQSDTKAGG VDCGGVGILG IAWAFGGMIF ILVYCTAGIS
101: GGHINPAVTF GLFLARKVSL IRAVLYMVAQ CLGAICGVGF VKAFQSSYYD RYGGGANSLA DGYNTGTGLA AEIIGTFVLV YTVFSATDPK RNARDSHVPV
201: LAPLPIGFAV FMVHLATIPI TGTGINPARS FGAAVIYNKS KPWDDHWIFW VGPFIGAAIA AFYHQFVLRA SGSKSLGSFR SAANV
Arabidopsis Description
PIP2Bplasma membrane intrinsic protein 2 [Source:TAIR;Acc:AT2G37170]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.