Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- golgi 2
- extracellular 1
- plasma membrane 2
- endoplasmic reticulum 1
- vacuole 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67380 | Canola | plastid | 100.0 | 100.0 |
| Bra017222.1-P | Field mustard | cytosol | 100.0 | 88.05 |
| CDY53270 | Canola | plasma membrane | 97.29 | 85.66 |
| AT2G36830.1 | Thale cress | golgi, plasma membrane, vacuole | 93.67 | 82.47 |
| CDX83623 | Canola | golgi, plasma membrane, plastid | 91.86 | 80.24 |
| CDY13639 | Canola | plasma membrane | 91.86 | 80.24 |
| CDY48983 | Canola | plasma membrane | 88.69 | 77.47 |
| CDY28539 | Canola | plasma membrane | 88.69 | 77.47 |
| PGSC0003DMT400072432 | Potato | cytosol | 85.07 | 75.81 |
| VIT_08s0007g04780.t01 | Wine grape | cytosol | 85.52 | 75.3 |
| Solyc10g083880.1.1 | Tomato | plastid | 84.16 | 75.0 |
| KRH67767 | Soybean | mitochondrion | 83.71 | 74.0 |
| KRG96046 | Soybean | nucleus | 82.81 | 73.2 |
| Os03t0146100-01 | Rice | nucleus | 82.35 | 72.8 |
| GSMUA_Achr8P12920_001 | Banana | cytosol, plasma membrane, vacuole | 81.45 | 72.0 |
| GSMUA_Achr1P01270_001 | Banana | cytosol, plasma membrane, vacuole | 81.0 | 71.6 |
| GSMUA_Achr11P... | Banana | cytosol, extracellular, vacuole | 80.54 | 71.2 |
| EER92857 | Sorghum | cytosol | 80.09 | 70.8 |
| Zm00001d027652_P001 | Maize | plasma membrane | 79.64 | 70.4 |
| TraesCS4A01G410800.1 | Wheat | golgi, plasma membrane, vacuole | 79.19 | 70.0 |
| TraesCS4B01G310900.1 | Wheat | unclear | 79.19 | 70.0 |
| GSMUA_Achr5P19470_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 78.73 | 69.32 |
| HORVU4Hr1G079230.1 | Barley | vacuole | 78.28 | 69.2 |
| VIT_06s0061g00730.t01 | Wine grape | cytosol, plasma membrane, vacuole | 74.21 | 65.34 |
| CDY07142 | Canola | cytosol | 74.21 | 65.08 |
| CDY69446 | Canola | cytosol | 74.21 | 65.08 |
| TraesCS4D01G308800.1 | Wheat | golgi, plasma membrane, vacuole | 75.11 | 64.59 |
| CDY28932 | Canola | endoplasmic reticulum, extracellular, vacuole | 58.82 | 61.9 |
| CDY65121 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 66.97 | 59.2 |
| CDY64499 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 66.52 | 58.8 |
| CDY59296 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 66.52 | 58.57 |
| CDY51678 | Canola | plasma membrane, vacuole | 66.06 | 58.4 |
| CDX77768 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 66.06 | 58.17 |
| CDX97733 | Canola | endoplasmic reticulum, extracellular | 63.35 | 56.45 |
| CDX82410 | Canola | plasma membrane | 63.35 | 56.22 |
| CDY63821 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 62.9 | 55.82 |
| CDY20190 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 62.9 | 55.82 |
| CDY30146 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 62.44 | 55.65 |
| CDY47816 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 61.99 | 54.15 |
| CDY48045 | Canola | golgi, mitochondrion, plasma membrane | 61.54 | 51.13 |
| CDX75873 | Canola | extracellular, golgi, vacuole | 63.35 | 50.91 |
| CDY66321 | Canola | plasma membrane | 61.09 | 50.75 |
| CDX72962 | Canola | plasma membrane | 59.73 | 49.81 |
| CDX96453 | Canola | cytosol | 59.28 | 49.43 |
| CDX68239 | Canola | cytosol | 59.28 | 49.43 |
| CDY11123 | Canola | cytosol | 59.28 | 49.43 |
| CDY35336 | Canola | extracellular | 31.67 | 48.95 |
| CDX81850 | Canola | golgi, mitochondrion, plasma membrane | 57.92 | 47.94 |
| CDX77009 | Canola | cytosol, plasma membrane, vacuole | 53.85 | 47.79 |
| CDY21731 | Canola | golgi, mitochondrion, plasma membrane | 57.47 | 47.57 |
| CDY26214 | Canola | plasma membrane | 56.11 | 46.44 |
| CDY19176 | Canola | plasma membrane | 55.66 | 46.07 |
| CDY47413 | Canola | mitochondrion, plastid | 42.08 | 36.05 |
| CDX99048 | Canola | mitochondrion, plastid | 41.63 | 35.66 |
| CDY66912 | Canola | extracellular | 31.67 | 33.98 |
| CDX89115 | Canola | plasma membrane | 33.03 | 32.44 |
| CDX72515 | Canola | golgi, plasma membrane | 36.2 | 31.5 |
| CDY70391 | Canola | extracellular, golgi | 22.17 | 30.82 |
| CDY09192 | Canola | plasma membrane | 35.75 | 30.5 |
| CDX71032 | Canola | plasma membrane | 35.29 | 30.0 |
| CDY31523 | Canola | plasma membrane | 35.29 | 30.0 |
| CDX88767 | Canola | plasma membrane | 35.29 | 30.0 |
| CDY53629 | Canola | cytosol | 33.94 | 28.96 |
| CDX69112 | Canola | plasma membrane | 36.2 | 28.47 |
| CDX76314 | Canola | cytosol | 36.2 | 28.47 |
| CDY52648 | Canola | plasma membrane | 36.2 | 28.47 |
| CDY07681 | Canola | plasma membrane | 36.65 | 28.12 |
| CDY14415 | Canola | cytosol, peroxisome, plasma membrane | 36.65 | 28.12 |
| CDY17511 | Canola | plasma membrane | 35.75 | 28.11 |
| CDY46759 | Canola | plasma membrane | 35.75 | 27.72 |
| CDY56697 | Canola | plasma membrane | 35.75 | 27.53 |
| CDX78177 | Canola | plasma membrane | 35.75 | 27.53 |
| CDX73446 | Canola | peroxisome | 35.29 | 27.27 |
| CDX78265 | Canola | plasma membrane | 35.29 | 27.27 |
| CDX91341 | Canola | plasma membrane | 34.84 | 27.02 |
| CDY46758 | Canola | plasma membrane | 34.39 | 26.86 |
| CDX91340 | Canola | plasma membrane | 34.39 | 26.67 |
| CDX67611 | Canola | plasma membrane | 34.39 | 26.57 |
| CDX90046 | Canola | cytosol, peroxisome, plasma membrane | 34.39 | 26.57 |
| CDY07519 | Canola | plasma membrane | 34.39 | 26.57 |
| CDY13298 | Canola | plasma membrane | 34.39 | 26.48 |
| CDY07221 | Canola | cytosol, peroxisome, plasma membrane | 33.94 | 26.22 |
| CDX91911 | Canola | cytosol, peroxisome, plasma membrane | 33.94 | 26.04 |
| CDY48920 | Canola | plasma membrane | 33.48 | 25.87 |
| CDX71738 | Canola | plasma membrane | 33.48 | 25.87 |
| CDY51161 | Canola | cytosol, peroxisome, plasma membrane | 33.48 | 25.87 |
| CDX74334 | Canola | cytosol, peroxisome, plasma membrane | 33.48 | 25.69 |
| CDY18886 | Canola | cytosol, peroxisome, plasma membrane | 33.03 | 25.52 |
| CDY27346 | Canola | cytosol, peroxisome, plasma membrane | 33.03 | 25.52 |
| CDY37078 | Canola | cytosol, peroxisome, plasma membrane | 33.03 | 25.52 |
| CDX74777 | Canola | cytosol, peroxisome, plasma membrane | 33.03 | 25.52 |
| CDX83385 | Canola | cytosol, peroxisome, plasma membrane | 33.03 | 25.52 |
| CDY10936 | Canola | plasma membrane | 33.03 | 25.44 |
| CDY38017 | Canola | plasma membrane | 32.58 | 25.17 |
| CDX95670 | Canola | cytosol, peroxisome, plasma membrane | 32.58 | 25.17 |
| CDX74983 | Canola | cytosol, peroxisome, plasma membrane | 22.17 | 24.87 |
| CDX94185 | Canola | plasma membrane | 32.13 | 24.74 |
| CDX74984 | Canola | cytosol, peroxisome, plasma membrane | 34.39 | 24.52 |
| CDY15165 | Canola | plastid | 33.48 | 22.84 |
| CDY66913 | Canola | cytosol, mitochondrion, nucleus | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.3 | GO:A0A078JJL9 | UniProt:A0A078JJL9 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr |
| EnsemblPlants:CDY66645 | ProteinID:CDY66645 | ProteinID:CDY66645.1 | ProteinID:CDY67380.1 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00055488001 | InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 |
| PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF265 | SUPFAM:SSF81338 | TMHMM:TMhelix |
| UniParc:UPI0004EE7460 | SEG:seg | : | : | : | : |
Description
BnaAnng22640DBnaAnng22640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JJL9]
Coordinates
chrLK035384:+:32..1287
Molecular Weight (calculated)
22419.3 Da
IEP (calculated)
6.501
GRAVY (calculated)
0.918
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MIFVFAGSGS GMAFNKLTEN GATTPAGLVA ASLAHAFGLF VAVSVGANIS GGHVNPAVTF GAFVGGNITL LRGILYWIAQ LLGSVVACLL LKFATGGLVV
101: PAFGLSAGVG VSNALVFEIV MTFGLVYTVY ATAVDPKNGS LGTIAPIAIG FIVGANILAG GAFSGASMNP AVAFGPAVVS WSWNNHWVYW AGPLVGGGLA
201: GLIYEVFFIN TTHEQLPTTD Y
101: PAFGLSAGVG VSNALVFEIV MTFGLVYTVY ATAVDPKNGS LGTIAPIAIG FIVGANILAG GAFSGASMNP AVAFGPAVVS WSWNNHWVYW AGPLVGGGLA
201: GLIYEVFFIN TTHEQLPTTD Y
001: MPIRNIAIGR PDEATRPDAL KAALAEFIST LIFVVAGSGS GMAFNKLTEN GATTPSGLVA AAVAHAFGLF VAVSVGANIS GGHVNPAVTF GAFIGGNITL
101: LRGILYWIAQ LLGSVVACLI LKFATGGLAV PAFGLSAGVG VLNAFVFEIV MTFGLVYTVY ATAIDPKNGS LGTIAPIAIG FIVGANILAG GAFSGASMNP
201: AVAFGPAVVS WTWTNHWVYW AGPLVGGGIA GLIYEVFFIN TTHEQLPTTD Y
101: LRGILYWIAQ LLGSVVACLI LKFATGGLAV PAFGLSAGVG VLNAFVFEIV MTFGLVYTVY ATAIDPKNGS LGTIAPIAIG FIVGANILAG GAFSGASMNP
201: AVAFGPAVVS WTWTNHWVYW AGPLVGGGIA GLIYEVFFIN TTHEQLPTTD Y
Arabidopsis Description
TIP1-1Aquaporin TIP1-1 [Source:UniProtKB/Swiss-Prot;Acc:P25818]
SUBAcon: [golgi,plasma membrane,vacuole]
SUBAcon: [golgi,plasma membrane,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.