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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane, vacuole
Any Predictor:secretory
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G165400.1
TraesCS1B01G182200.1
TraesCS1D01G175200.1
TraesCS2A01G198500.1
TraesCS2A01G374400.1
TraesCS2B01G225900.1
TraesCS2B01G391400.1
TraesCS2D01G206300.1
TraesCS2D01G370800.1
TraesCS4A01G410800.1
TraesCS4B01G310900.1
TraesCS4D01G308800.1
TraesCS7A01G331300.1
TraesCS7B01G243000.1
TraesCS7D01G339600.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G36830.1 TraesCS1A01G165400.1 AT1G73190.1 21798944
AT2G36830.1 TraesCS1B01G182200.1 AT1G73190.1 21798944
AT2G36830.1 TraesCS1D01G175200.1 AT1G73190.1 21798944
AT2G36830.1 TraesCS2A01G374400.1 AT1G73190.1 21798944
AT2G36830.1 TraesCS2B01G391400.1 AT1G73190.1 21798944
AT2G36830.1 TraesCS2D01G370800.1 AT1G73190.1 21798944
AT3G26520.1 TraesCS1A01G165400.1 AT1G73190.1 23163742
AT3G26520.1 TraesCS1B01G182200.1 AT1G73190.1 23163742
AT3G26520.1 TraesCS1D01G175200.1 AT1G73190.1 23163742
AT3G26520.1 TraesCS2A01G374400.1 AT1G73190.1 23163742
AT3G26520.1 TraesCS2B01G391400.1 AT1G73190.1 23163742
AT3G26520.1 TraesCS2D01G370800.1 AT1G73190.1 23163742
AT3G26520.1 TraesCS7A01G331300.1 AT3G16240.1 23163742
AT3G26520.1 TraesCS7B01G243000.1 AT3G16240.1 23163742
AT3G26520.1 TraesCS7D01G339600.1 AT3G16240.1 23163742
AT3G26520.1 TraesCS4A01G410800.1 AT3G26520.1 23163742
AT3G26520.1 TraesCS4B01G310900.1 AT3G26520.1 23163742
AT3G26520.1 TraesCS4D01G308800.1 AT3G26520.1 23163742
AT3G26520.1 TraesCS2A01G198500.1 AT3G53420.1 23163742
AT3G26520.1 TraesCS2B01G225900.1 AT3G53420.1 23163742
AT3G26520.1 TraesCS2D01G206300.1 AT3G53420.1 23163742
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4B01G310900.1 Wheat unclear 99.6 99.6
HORVU4Hr1G079230.1 Barley vacuole 98.8 98.8
TraesCS4D01G308800.1 Wheat golgi, plasma membrane, vacuole 95.6 93.0
EER92857 Sorghum cytosol 91.2 91.2
Os03t0146100-01 Rice nucleus 90.0 90.0
Zm00001d027652_P001 Maize plasma membrane 89.6 89.6
GSMUA_Achr8P12920_001 Banana cytosol, plasma membrane, vacuole 84.4 84.4
GSMUA_Achr11P... Banana cytosol, extracellular, vacuole 81.6 81.6
GSMUA_Achr1P01270_001 Banana cytosol, plasma membrane, vacuole 80.8 80.8
Solyc06g074820.2.1 Tomato plastid 80.0 80.0
GSMUA_Achr5P19470_001 Banana endoplasmic reticulum, plasma membrane, vacuole 80.0 79.68
PGSC0003DMT400018375 Potato cytosol 79.6 79.6
CDY66645 Canola plastid 70.0 79.19
CDY67380 Canola plastid 70.0 79.19
Bra017222.1-P Field mustard cytosol 78.0 77.69
CDY53270 Canola plasma membrane 76.8 76.49
VIT_08s0007g04780.t01 Wine grape cytosol 76.4 76.1
AT3G26520.1 Thale cress plasma membrane 76.4 75.49
AT2G36830.1 Thale cress golgi, plasma membrane, vacuole 75.6 75.3
KRH67767 Soybean mitochondrion 75.2 75.2
CDY28539 Canola plasma membrane 75.6 74.7
Bra032937.1-P Field mustard plasma membrane 75.6 74.7
CDX83623 Canola golgi, plasma membrane, plastid 75.6 74.7
CDY48983 Canola plasma membrane 75.6 74.7
CDY13639 Canola plasma membrane 75.6 74.7
KRG96046 Soybean nucleus 74.4 74.4
Bra025210.1-P Field mustard plasma membrane 75.2 74.31
TraesCS3A01G535300.1 Wheat plasma membrane 70.8 70.24
VIT_06s0061g00730.t01 Wine grape cytosol, plasma membrane, vacuole 70.0 69.72
TraesCS7A01G331300.1 Wheat unclear 62.8 63.31
TraesCS6A01G250300.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 62.0 62.25
TraesCS2A01G414100.1 Wheat plasma membrane 58.8 59.27
TraesCS1A01G165400.1 Wheat golgi, mitochondrion, plasma membrane, plastid 56.0 53.23
TraesCS3A01G434600.1 Wheat endoplasmic reticulum, extracellular, vacuole 50.0 52.74
TraesCS2A01G374400.1 Wheat plasma membrane 51.6 48.68
TraesCS3A01G155800.1 Wheat plasma membrane 47.6 47.98
TraesCS5A01G518300.1 Wheat golgi, plasma membrane, vacuole 45.6 44.53
TraesCS2A01G414200.1 Wheat plastid 39.6 37.79
TraesCS2A01G198500.1 Wheat plasma membrane 36.4 31.38
TraesCS6A01G222100.1 Wheat golgi, peroxisome, plasma membrane 34.8 30.42
TraesCS5A01G100000.1 Wheat plasma membrane 34.8 30.42
TraesCS2A01G379900.1 Wheat plasma membrane 35.2 30.34
TraesCS4A01G312700.1 Wheat plasma membrane 34.8 29.9
TraesCS2A01G379800.1 Wheat plasma membrane 34.4 29.66
TraesCS5A01G530600.1 Wheat golgi, peroxisome, plasma membrane 34.0 29.11
TraesCS2A01G065700.1 Wheat golgi 32.8 28.87
TraesCS5A01G332300.1 Wheat plasma membrane 33.2 28.52
TraesCS6A01G245100.1 Wheat golgi, peroxisome, plasma membrane 32.8 28.28
TraesCS6A01G082900.1 Wheat golgi, peroxisome, plasma membrane 32.4 27.46
TraesCS6A01G405600.1 Wheat plasma membrane 32.0 27.4
TraesCS6A01G405700.1 Wheat golgi 32.0 27.4
TraesCS5A01G181000.1 Wheat plastid 31.6 27.24
TraesCS7A01G191200.1 Wheat golgi, peroxisome, plasma membrane 29.2 24.01
TraesCS4A01G286200.1 Wheat golgi, peroxisome, plasma membrane 28.0 23.03
TraesCS2A01G407700.2 Wheat golgi, peroxisome, plasma membrane 25.2 21.8
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.3InterPro:Aquaporin-likeInterPro:Aquaporin_transptrGO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0055085
InterPro:IPR023271InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783ScanProsite:PS00221
PANTHER:PTHR19139PANTHER:PTHR19139:SF265SUPFAM:SSF81338TMHMM:TMhelixEnsemblPlantsGene:TraesCS4A01G410800EnsemblPlants:TraesCS4A01G410800.1
TIGR:cd00333SEG:seg::::
Description
No Description!
Coordinates
chr4A:-:683616676..683618332
Molecular Weight (calculated)
25743.4 Da
IEP (calculated)
6.508
GRAVY (calculated)
0.808
Length
250 amino acids
Sequence
(BLAST)
001: MPVSRIAVGS HREVYEVGAL KAALAEFIST LIFVFAGQGS GMAFSKLSPD GAATPAGLIS AAIAHAFALF VAVSVGANIS GGHVNPAVTF GAFVGGNITL
101: FRGLLYWIAQ LLGSTAACFL LRFSTGGLPT GTFGLSGIGA WEAVVLEIVM TFGLVYTVYA TAVDPKKGSL GTIAPIAIGF IVGANILVGG AFSGASMNPA
201: VSFGPALVSW EWGYQWVYWV GPLIGGGLAG VIYELLFISR THEQLPTTDY
Best Arabidopsis Sequence Match ( AT2G36830.1 )
(BLAST)
001: MPIRNIAIGR PDEATRPDAL KAALAEFIST LIFVVAGSGS GMAFNKLTEN GATTPSGLVA AAVAHAFGLF VAVSVGANIS GGHVNPAVTF GAFIGGNITL
101: LRGILYWIAQ LLGSVVACLI LKFATGGLAV PAFGLSAGVG VLNAFVFEIV MTFGLVYTVY ATAIDPKNGS LGTIAPIAIG FIVGANILAG GAFSGASMNP
201: AVAFGPAVVS WTWTNHWVYW AGPLVGGGIA GLIYEVFFIN TTHEQLPTTD Y
Arabidopsis Description
TIP1-1Aquaporin TIP1-1 [Source:UniProtKB/Swiss-Prot;Acc:P25818]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.