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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, peroxisome, plasma membrane
Any Predictor:golgi, peroxisome, plasma membrane
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G065700.1
TraesCS2A01G198500.1
TraesCS2B01G077700.1
TraesCS2B01G225900.1
TraesCS2D01G063900.1
TraesCS2D01G206300.1
TraesCS5A01G316300.1
TraesCS5B01G316800.1
TraesCS5D01G322500.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G01620.1 TraesCS2A01G065700.1 AT2G16850.1 21798944
AT1G01620.1 TraesCS2B01G077700.1 AT2G16850.1 21798944
AT1G01620.1 TraesCS2D01G063900.1 AT2G16850.1 21798944
AT1G01620.1 TraesCS2A01G198500.1 AT2G37180.1 21798944
AT1G01620.1 TraesCS2B01G225900.1 AT2G37180.1 21798944
AT1G01620.1 TraesCS2D01G206300.1 AT2G37180.1 21798944
AT1G01620.1 TraesCS2A01G198500.1 AT3G54820.1 21798944
AT1G01620.1 TraesCS2B01G225900.1 AT3G54820.1 21798944
AT1G01620.1 TraesCS2D01G206300.1 AT3G54820.1 21798944
AT4G00430.1 TraesCS2A01G065700.1 AT2G16850.1 21798944
AT4G00430.1 TraesCS2B01G077700.1 AT2G16850.1 21798944
AT4G00430.1 TraesCS2D01G063900.1 AT2G16850.1 21798944
AT4G00430.1 TraesCS2A01G198500.1 AT2G37180.1 21798944
AT4G00430.1 TraesCS2B01G225900.1 AT2G37180.1 21798944
AT4G00430.1 TraesCS2D01G206300.1 AT2G37180.1 21798944
AT4G00430.1 TraesCS2A01G198500.1 AT3G54820.1 21798944
AT4G00430.1 TraesCS2B01G225900.1 AT3G54820.1 21798944
AT4G00430.1 TraesCS2D01G206300.1 AT3G54820.1 21798944
AT4G00430.1 TraesCS5A01G316300.1 AT4G24090.1 21798944
AT4G00430.1 TraesCS5B01G316800.1 AT4G24090.1 21798944
AT4G00430.1 TraesCS5D01G322500.1 AT4G24090.1 21798944
AT4G23400.1 TraesCS2A01G198500.1 AT2G37180.1 21798944
AT4G23400.1 TraesCS2B01G225900.1 AT2G37180.1 21798944
AT4G23400.1 TraesCS2D01G206300.1 AT2G37180.1 21798944
AT4G23400.1 TraesCS2A01G198500.1 AT3G54820.1 21798944
AT4G23400.1 TraesCS2B01G225900.1 AT3G54820.1 21798944
AT4G23400.1 TraesCS2D01G206300.1 AT3G54820.1 21798944
AT4G23400.1 TraesCS2A01G065700.1 AT4G35100.1 21798944
AT4G23400.1 TraesCS2B01G077700.1 AT4G35100.1 21798944
AT4G23400.1 TraesCS2D01G063900.1 AT4G35100.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY66913 Canola cytosol, mitochondrion, nucleus 13.49 84.78
TraesCS6A01G245100.1 Wheat golgi, peroxisome, plasma membrane 72.32 72.07
AT4G23400.1 Thale cress plasma membrane 68.51 68.99
CDX83385 Canola cytosol, peroxisome, plasma membrane 67.47 68.18
CDY27346 Canola cytosol, peroxisome, plasma membrane 67.47 68.18
CDY37078 Canola cytosol, peroxisome, plasma membrane 67.47 68.18
CDY38017 Canola plasma membrane 67.47 68.18
Bra032644.1-P Field mustard plasma membrane 67.47 68.18
Solyc01g094690.2.1 Tomato nucleus 67.13 68.07
CDX94185 Canola plasma membrane 67.47 67.94
CDY10936 Canola plasma membrane 67.47 67.94
KRH59918 Soybean peroxisome 67.47 67.94
AT4G00430.1 Thale cress golgi, peroxisome, plasma membrane 67.47 67.94
TraesCS5A01G181000.1 Wheat plastid 68.17 67.93
CDY51161 Canola cytosol, peroxisome, plasma membrane 67.13 67.83
AT1G01620.1 Thale cress golgi, peroxisome, plasma membrane 67.13 67.83
CDY07221 Canola cytosol, peroxisome, plasma membrane 67.13 67.83
CDX95670 Canola cytosol, peroxisome, plasma membrane 67.13 67.83
VIT_15s0046g02420.t01 Wine grape peroxisome 67.13 67.83
CDX74777 Canola cytosol, peroxisome, plasma membrane 67.13 67.83
Bra019307.1-P Field mustard cytosol, peroxisome, plasma membrane 67.13 67.6
CDX90046 Canola cytosol, peroxisome, plasma membrane 66.78 67.48
Bra033248.1-P Field mustard cytosol, peroxisome, plasma membrane 66.78 67.48
CDY18886 Canola cytosol, peroxisome, plasma membrane 66.78 67.48
KRH41192 Soybean endoplasmic reticulum 67.47 67.47
PGSC0003DMT400000151 Potato cytosol, peroxisome, plasma membrane 66.44 67.37
CDX74334 Canola cytosol, peroxisome, plasma membrane 67.13 67.36
Bra000974.1-P Field mustard cytosol, peroxisome, plasma membrane 67.13 67.36
CDX71738 Canola plasma membrane 66.44 67.13
Solyc08g081190.2.1 Tomato plastid 66.44 67.13
Bra004950.1-P Field mustard cytosol, peroxisome, plasma membrane 66.44 67.13
CDX91911 Canola cytosol, peroxisome, plasma membrane 66.78 67.01
VIT_02s0025g03390.t01 Wine grape peroxisome 66.44 66.9
CDY48920 Canola plasma membrane 66.09 66.78
AT3G61430.1 Thale cress plasma membrane 66.09 66.78
PGSC0003DMT400032134 Potato cytosol, peroxisome, plasma membrane 66.09 66.78
TraesCS6A01G405700.1 Wheat golgi 67.47 66.78
TraesCS6A01G405600.1 Wheat plasma membrane 67.47 66.78
Solyc12g056220.1.1 Tomato plastid 66.44 66.67
PGSC0003DMT400014809 Potato peroxisome 66.09 66.55
Solyc08g008050.2.1 Tomato peroxisome 66.09 66.55
Bra007603.1-P Field mustard plasma membrane 65.74 66.43
Bra014437.1-P Field mustard plasma membrane 65.74 66.43
PGSC0003DMT400012780 Potato cytosol, peroxisome, plasma membrane 66.09 66.32
KRH77555 Soybean plasma membrane 64.01 64.69
KRH27918 Soybean plasma membrane 63.67 64.34
CDX89115 Canola plasma membrane 49.13 63.11
CDY66912 Canola extracellular 44.29 62.14
VIT_15s0046g02410.t01 Wine grape plasma membrane 61.25 61.89
AT2G45960.3 Thale cress golgi, peroxisome, plasma membrane 64.01 61.46
CDY15165 Canola plastid 67.47 60.19
TraesCS5A01G100000.1 Wheat plasma membrane 50.87 51.4
TraesCS2A01G379900.1 Wheat plasma membrane 51.56 51.38
TraesCS6A01G222100.1 Wheat golgi, peroxisome, plasma membrane 50.17 50.7
TraesCS2A01G379800.1 Wheat plasma membrane 50.87 50.69
TraesCS2A01G065700.1 Wheat golgi 49.48 50.35
TraesCS2A01G198500.1 Wheat plasma membrane 49.13 48.97
TraesCS4A01G312700.1 Wheat plasma membrane 46.02 45.7
TraesCS5A01G530600.1 Wheat golgi, peroxisome, plasma membrane 45.67 45.21
TraesCS5A01G332300.1 Wheat plasma membrane 44.98 44.67
TraesCS6A01G082900.1 Wheat golgi, peroxisome, plasma membrane 44.64 43.73
TraesCS7A01G191200.1 Wheat golgi, peroxisome, plasma membrane 39.1 37.17
TraesCS4A01G286200.1 Wheat golgi, peroxisome, plasma membrane 39.1 37.17
TraesCS7A01G331300.1 Wheat unclear 23.18 27.02
TraesCS3A01G535300.1 Wheat plasma membrane 22.84 26.19
TraesCS6A01G250300.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 22.15 25.7
TraesCS4A01G410800.1 Wheat golgi, plasma membrane, vacuole 21.8 25.2
TraesCS2A01G414100.1 Wheat plasma membrane 21.45 25.0
TraesCS2A01G374400.1 Wheat plasma membrane 21.45 23.4
TraesCS2A01G414200.1 Wheat plastid 20.76 22.9
TraesCS1A01G165400.1 Wheat golgi, mitochondrion, plasma membrane, plastid 20.76 22.81
TraesCS3A01G155800.1 Wheat plasma membrane 17.99 20.97
TraesCS5A01G518300.1 Wheat golgi, plasma membrane, vacuole 17.3 19.53
TraesCS3A01G434600.1 Wheat endoplasmic reticulum, extracellular, vacuole 15.92 19.41
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.2InterPro:Aquaporin-likeInterPro:Aquaporin_transptrGO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0055085
InterPro:IPR023271InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783ScanProsite:PS00221
PANTHER:PTHR19139PANTHER:PTHR19139:SF140SUPFAM:SSF81338TMHMM:TMhelixEnsemblPlantsGene:TraesCS2A01G407700EnsemblPlants:TraesCS2A01G407700.2
SEG:seg:::::
Description
No Description!
Coordinates
chr2A:-:663329175..663330129
Molecular Weight (calculated)
30623.7 Da
IEP (calculated)
9.171
GRAVY (calculated)
-0.009
Length
289 amino acids
Sequence
(BLAST)
001: MEGKEEDVRL GANKYSERQP IGTAAQGSED KDYKEPPPAP LFEPGELKSW SFYRAGIAEF MATFLFLYVT ILTVMGYSGA TSKCASVGIQ GIAWSFGGMI
101: FALVYCTAGI SGGHINPAVT FGLFLARKLS LTRAVFYIIM QCLGAICGAG VVKGFQQGLY MGNGGGANVV APGYTKGSGL GAEIIGTFVL VYTVFSATDA
201: KRNARDSHVP VSAYHHRRSV LPPVEFPYRA YLKLNGVCNV DRSSPRCPSG SPCSWCTWPP SPSPAPASTR RGASARPSST TGSTPGQTT
Best Arabidopsis Sequence Match ( AT2G45960.1 )
(BLAST)
001: MEGKEEDVRV GANKFPERQP IGTSAQSDKD YKEPPPAPLF EPGELASWSF WRAGIAEFIA TFLFLYITVL TVMGVKRSPN MCASVGIQGI AWAFGGMIFA
101: LVYCTAGISG GHINPAVTFG LFLARKLSLT RAVYYIVMQC LGAICGAGVV KGFQPKQYQA LGGGANTIAH GYTKGSGLGA EIIGTFVLVY TVFSATDAKR
201: NARDSHVPIL APLPIGFAVF LVHLATIPIT GTGINPARSL GAAIIFNKDN AWDDHWVFWV GPFIGAALAA LYHVIVIRAI PFKSRS
Arabidopsis Description
PIP1BPlasma membrane intrinsic protein 1B [Source:UniProtKB/TrEMBL;Acc:A8MRW1]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.