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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • extracellular 1
  • golgi 1
  • plasma membrane 3
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY66913 Canola cytosol, mitochondrion, nucleus 15.73 97.83
CDX90046 Canola cytosol, peroxisome, plasma membrane 96.5 96.5
CDY51161 Canola cytosol, peroxisome, plasma membrane 96.15 96.15
CDX74334 Canola cytosol, peroxisome, plasma membrane 96.15 95.49
CDY07221 Canola cytosol, peroxisome, plasma membrane 95.45 95.45
CDX91911 Canola cytosol, peroxisome, plasma membrane 95.8 95.14
CDY27346 Canola cytosol, peroxisome, plasma membrane 94.06 94.06
CDY37078 Canola cytosol, peroxisome, plasma membrane 94.06 94.06
CDX71738 Canola plasma membrane 93.71 93.71
CDX74777 Canola cytosol, peroxisome, plasma membrane 93.71 93.71
CDX83385 Canola cytosol, peroxisome, plasma membrane 93.36 93.36
CDY18886 Canola cytosol, peroxisome, plasma membrane 93.36 93.36
CDY48920 Canola plasma membrane 93.36 93.36
CDX95670 Canola cytosol, peroxisome, plasma membrane 93.01 93.01
CDX89115 Canola plasma membrane 72.73 92.44
CDY66912 Canola extracellular 66.43 92.23
CDY10936 Canola plasma membrane 92.31 91.99
CDX94185 Canola plasma membrane 91.26 90.94
GSMUA_AchrUn_... Banana extracellular 60.14 90.53
GSMUA_Achr5P12400_001 Banana extracellular 59.79 90.0
TraesCS6B01G398000.1 Wheat extracellular 40.21 89.84
VIT_13s0067g00220.t01 Wine grape plasma membrane 88.81 88.81
Os04t0559700-01 Rice plasma membrane 88.46 87.85
PGSC0003DMT400000151 Potato cytosol, peroxisome, plasma membrane 87.41 87.72
Solyc01g094690.2.1 Tomato nucleus 87.41 87.72
GSMUA_Achr8P11540_001 Banana extracellular 58.04 87.37
GSMUA_AchrUn_... Banana extracellular 58.04 87.37
TraesCS2B01G425600.1 Wheat golgi, plasma membrane 87.76 87.15
KRH59918 Soybean peroxisome 87.06 86.76
KRH77555 Soybean plasma membrane 86.71 86.71
CDY15165 Canola plastid 97.9 86.42
Solyc08g008050.2.1 Tomato peroxisome 86.71 86.41
KRH27918 Soybean plasma membrane 86.36 86.36
PGSC0003DMT400053479 Potato plasma membrane 86.36 86.36
TraesCS6B01G279200.1 Wheat plastid 87.41 86.21
EES07484 Sorghum plasma membrane 86.71 85.81
KRH41192 Soybean endoplasmic reticulum 86.71 85.81
Zm00001d017526_P001 Maize plasma membrane 86.71 85.81
PGSC0003DMT400012780 Potato cytosol, peroxisome, plasma membrane 86.36 85.76
PGSC0003DMT400014809 Potato peroxisome 86.01 85.71
Solyc08g081190.2.1 Tomato plastid 85.66 85.66
KRH66037 Soybean golgi, peroxisome, plasma membrane 84.97 85.56
HORVU6Hr1G064140.1 Barley golgi, peroxisome, plasma membrane 86.71 85.52
TraesCS2B01G605900.1 Wheat golgi, peroxisome, plasma membrane 86.36 85.47
Solyc12g056220.1.1 Tomato plastid 86.01 85.42
Zm00001d002690_P001 Maize plasma membrane 86.01 85.42
Solyc03g096290.2.1 Tomato nucleus 85.31 85.31
Zm00001d051403_P001 Maize plasma membrane 87.06 85.27
TraesCS6D01G227500.1 Wheat golgi 86.36 85.17
Os02t0666200-01 Rice plasma membrane 86.01 85.12
EES11257 Sorghum cytosol, peroxisome, plasma membrane 85.66 85.07
PGSC0003DMT400032134 Potato cytosol, peroxisome, plasma membrane 84.97 84.97
TraesCS6D01G389500.1 Wheat plasma membrane 86.71 84.93
TraesCS6B01G450200.1 Wheat plastid 86.36 84.59
TraesCS5B01G178700.1 Wheat plasma membrane 86.01 84.25
TraesCS5D01G185400.1 Wheat plasma membrane 86.01 84.25
TraesCS6B01G450000.1 Wheat unclear 86.01 84.25
TraesCS6D01G389400.1 Wheat plasma membrane 86.01 84.25
Zm00001d051872_P001 Maize plasma membrane 84.27 83.68
KRH00178 Soybean golgi, peroxisome, plasma membrane 82.87 82.58
OQU85985 Sorghum cytosol, peroxisome, plasma membrane 82.87 81.72
HORVU5Hr1G055200.4 Barley golgi, plastid 85.66 78.78
EER89434 Sorghum peroxisome 80.77 78.04
TraesCS2D01G404800.2 Wheat golgi, peroxisome, plasma membrane 80.77 73.57
CDY70391 Canola extracellular, golgi 39.86 71.7
CDX69112 Canola plasma membrane 69.93 71.17
CDX76314 Canola cytosol 69.93 71.17
CDY52648 Canola plasma membrane 69.93 71.17
CDY17511 Canola plasma membrane 69.58 70.82
CDX72515 Canola golgi, plasma membrane 61.19 68.9
CDX67611 Canola plasma membrane 68.88 68.88
CDY07519 Canola plasma membrane 68.88 68.88
CDY09192 Canola plasma membrane 61.89 68.34
CDX78265 Canola plasma membrane 68.18 68.18
CDX71032 Canola plasma membrane 61.89 68.08
CDX78177 Canola plasma membrane 68.18 67.94
CDY56697 Canola plasma membrane 68.18 67.94
CDX73446 Canola peroxisome 67.83 67.83
CDX88767 Canola plasma membrane 61.54 67.69
CDY13298 Canola plasma membrane 67.83 67.6
CDY46758 Canola plasma membrane 66.78 67.49
TraesCS2A01G407700.2 Wheat golgi, peroxisome, plasma membrane 68.18 67.47
CDX91340 Canola plasma membrane 67.13 67.37
CDY46759 Canola plasma membrane 67.13 67.37
CDY31523 Canola plasma membrane 60.84 66.92
CDY53629 Canola cytosol 60.14 66.41
CDX91341 Canola plasma membrane 66.08 66.32
CDY14415 Canola cytosol, peroxisome, plasma membrane 66.08 65.62
CDX74983 Canola cytosol, peroxisome, plasma membrane 45.1 65.48
KRH75838 Soybean golgi, peroxisome, plasma membrane 82.87 65.29
CDY07681 Canola plasma membrane 65.73 65.28
CDX74984 Canola cytosol, peroxisome, plasma membrane 67.13 61.94
CDX97733 Canola endoplasmic reticulum, extracellular 31.12 35.89
CDY30146 Canola endoplasmic reticulum, extracellular, plasma membrane 31.12 35.89
CDY63821 Canola endoplasmic reticulum, plasma membrane, vacuole 31.12 35.74
CDX82410 Canola plasma membrane 30.77 35.34
CDY20190 Canola endoplasmic reticulum, plasma membrane, vacuole 30.77 35.34
CDY28932 Canola endoplasmic reticulum, extracellular, vacuole 25.87 35.24
CDY66321 Canola plasma membrane 32.17 34.59
CDY64499 Canola endoplasmic reticulum, plasma membrane, vacuole 30.07 34.4
CDY65121 Canola endoplasmic reticulum, plasma membrane, vacuole 30.07 34.4
CDX68239 Canola cytosol 31.47 33.96
CDY11123 Canola cytosol 31.47 33.96
CDX77768 Canola endoplasmic reticulum, plasma membrane, vacuole 29.72 33.86
CDY59296 Canola endoplasmic reticulum, plasma membrane, vacuole 29.72 33.86
CDY48045 Canola golgi, mitochondrion, plasma membrane 31.47 33.83
CDX77009 Canola cytosol, plasma membrane, vacuole 29.37 33.73
CDY07142 Canola cytosol 29.37 33.33
CDY26214 Canola plasma membrane 31.12 33.33
CDY69446 Canola cytosol 29.37 33.33
CDX96453 Canola cytosol 30.77 33.21
CDY47816 Canola endoplasmic reticulum, plasma membrane, vacuole 29.37 33.2
CDY19176 Canola plasma membrane 30.77 32.96
CDY35336 Canola extracellular 16.43 32.87
CDX72962 Canola plasma membrane 30.42 32.83
CDY28539 Canola plasma membrane 29.02 32.81
CDY48983 Canola plasma membrane 29.02 32.81
CDY51678 Canola plasma membrane, vacuole 28.67 32.8
CDY66645 Canola plastid 25.17 32.58
CDY67380 Canola plastid 25.17 32.58
CDX83623 Canola golgi, plasma membrane, plastid 28.67 32.41
CDY13639 Canola plasma membrane 28.67 32.41
CDY53270 Canola plasma membrane 28.32 32.27
CDX81850 Canola golgi, mitochondrion, plasma membrane 30.07 32.21
CDY21731 Canola golgi, mitochondrion, plasma membrane 30.07 32.21
CDX75873 Canola extracellular, golgi, vacuole 30.42 31.64
CDY47413 Canola mitochondrion, plastid 25.87 28.68
CDX99048 Canola mitochondrion, plastid 25.52 28.29
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.2GO:A0A078HJK8UniProt:A0A078HJK8InterPro:Aquaporin-likeInterPro:Aquaporin_transptr
EnsemblPlants:CDY38017ProteinID:CDY38017ProteinID:CDY38017.1GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0016021GO:GO:0055085
EnsemblPlantsGene:GSBRNA2T00065076001InterPro:IPR023271InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783
ScanProsite:PS00221PANTHER:PTHR19139PANTHER:PTHR19139:SF202SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelix
UniParc:UPI0004EE2CFC:::::
Description
BnaCnng08780DBnaCnng08780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HJK8]
Coordinates
chrLK032414:-:123070..124489
Molecular Weight (calculated)
30617.3 Da
IEP (calculated)
8.858
GRAVY (calculated)
0.367
Length
286 amino acids
Sequence
(BLAST)
001: MEGKEEDVRV GANKFPERQP IGTSAQSDKD YKEPPPAPLF EPGELSSWSF WRAGIAEFIA TFLFLYITVL TNQRVMGAPN MCASVGIQGI AWAFGGMIFA
101: LVYCTAGISG GHINPAVTFG LFLARKLSLT RAVFYMVMQC LGAICGAGVV KGFQPTPYQT LGGGANTVAP GYTKGSGLGA EIIGTFVLVY TVFSATDAKR
201: SARDSHVPIL APLPIGFAVF LVHLATIPIT GTGINPARSL GAAIIYNKDH AWDDHWIFWV GPFIGAALAA LYHQLVIRAI PFKTRT
Best Arabidopsis Sequence Match ( AT1G01620.1 )
(BLAST)
001: MEGKEEDVRV GANKFPERQP IGTSAQTDKD YKEPPPAPFF EPGELSSWSF YRAGIAEFIA TFLFLYITVL TVMGVKRAPN MCASVGIQGI AWAFGGMIFA
101: LVYCTAGISG GHINPAVTFG LFLARKLSLT RAVFYIVMQC LGAICGAGVV KGFQPNPYQT LGGGANTVAH GYTKGSGLGA EIIGTFVLVY TVFSATDAKR
201: SARDSHVPIL APLPIGFAVF LVHLATIPIT GTGINPARSL GAAIIYNKDH AWDDHWIFWV GPFIGAALAA LYHQLVIRAI PFKSRS
Arabidopsis Description
PIP1-3TMP-B [Source:UniProtKB/TrEMBL;Acc:A0A178WIA6]
SUBAcon: [golgi,plasma membrane,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.