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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 3
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:plastid
MultiLoc:endoplasmic reticulum
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY59296 Canola endoplasmic reticulum, plasma membrane, vacuole 99.6 99.6
Bra024943.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 99.2 99.2
CDY51678 Canola plasma membrane, vacuole 93.23 93.6
CDY28932 Canola endoplasmic reticulum, extracellular, vacuole 77.29 92.38
AT5G47450.1 Thale cress golgi, plasma membrane 91.63 92.0
CDY65121 Canola endoplasmic reticulum, plasma membrane, vacuole 90.04 90.4
CDY64499 Canola endoplasmic reticulum, plasma membrane, vacuole 89.64 90.0
PGSC0003DMT400030994 Potato endoplasmic reticulum, plasma membrane, vacuole 81.67 82.0
Solyc06g060760.2.1 Tomato endoplasmic reticulum 81.67 82.0
VIT_00s0229g00130.t01 Wine grape endoplasmic reticulum, plasma membrane, vacuole 78.49 78.8
GSMUA_Achr11P... Banana endoplasmic reticulum, plasma membrane 78.09 78.71
GSMUA_Achr11P... Banana extracellular, plasma membrane 77.29 77.91
KRH28112 Soybean mitochondrion 76.89 77.51
KRH77347 Soybean mitochondrion 76.49 77.11
KXG31086 Sorghum golgi, plasma membrane, vacuole 75.7 76.31
Zm00001d002738_P001 Maize plasma membrane 74.9 75.81
Zm00001d017485_P002 Maize endoplasmic reticulum, extracellular, plasma membrane 75.3 75.6
Zm00001d051362_P001 Maize plasma membrane 74.9 75.5
TraesCS6A01G250300.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 74.5 75.1
TraesCS6B01G275100.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 74.5 75.1
TraesCS6D01G232100.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 74.5 75.1
Os02t0658100-01 Rice vacuole 61.35 74.76
CDX82410 Canola plasma membrane 74.1 74.7
EES12617 Sorghum plasma membrane 74.1 74.7
Zm00001d026177_P001 Maize extracellular 73.71 74.6
HORVU0Hr1G032130.2 Barley endoplasmic reticulum, plasma membrane, vacuole 73.71 74.3
HORVU6Hr1G062980.1 Barley endoplasmic reticulum, plasma membrane, vacuole 73.71 74.3
TraesCS2A01G414100.1 Wheat plasma membrane 73.31 74.19
TraesCS2B01G433200.1 Wheat plasma membrane 73.31 74.19
TraesCS2D01G411400.1 Wheat plasma membrane 72.51 73.39
CDX97733 Canola endoplasmic reticulum, extracellular 72.11 72.98
CDY20190 Canola endoplasmic reticulum, plasma membrane, vacuole 72.11 72.69
CDY63821 Canola endoplasmic reticulum, plasma membrane, vacuole 72.11 72.69
CDY30146 Canola endoplasmic reticulum, extracellular, plasma membrane 71.71 72.58
Os04t0550900-00 Rice endoplasmic reticulum, extracellular, vacuole 38.65 68.31
CDX75873 Canola extracellular, golgi, vacuole 74.1 67.64
CDY47816 Canola endoplasmic reticulum, plasma membrane, vacuole 67.33 66.8
CDY66645 Canola plastid 58.17 66.06
CDY67380 Canola plastid 58.17 66.06
CDX83623 Canola golgi, plasma membrane, plastid 63.74 63.24
CDY13639 Canola plasma membrane 63.35 62.85
CDY28539 Canola plasma membrane 62.95 62.45
CDY48983 Canola plasma membrane 62.95 62.45
CDY53270 Canola plasma membrane 61.75 61.75
CDY07142 Canola cytosol 52.99 52.78
CDY69446 Canola cytosol 52.99 52.78
CDX77009 Canola cytosol, plasma membrane, vacuole 50.2 50.6
CDY35336 Canola extracellular 27.89 48.95
CDY48045 Canola golgi, mitochondrion, plasma membrane 51.0 48.12
CDY66321 Canola plasma membrane 51.0 48.12
CDX68239 Canola cytosol 50.6 47.92
CDY11123 Canola cytosol 50.6 47.92
CDX72962 Canola plasma membrane 49.8 47.17
CDX96453 Canola cytosol 49.8 47.17
CDX81850 Canola golgi, mitochondrion, plasma membrane 49.0 46.07
CDY21731 Canola golgi, mitochondrion, plasma membrane 49.0 46.07
CDY26214 Canola plasma membrane 48.61 45.69
CDY19176 Canola plasma membrane 48.21 45.32
CDY47413 Canola mitochondrion, plastid 40.24 39.15
CDX99048 Canola mitochondrion, plastid 39.84 38.76
CDY66912 Canola extracellular 27.89 33.98
CDX72515 Canola golgi, plasma membrane 34.26 33.86
CDX89115 Canola plasma membrane 29.08 32.44
CDX69112 Canola plasma membrane 36.26 32.38
CDX76314 Canola cytosol 36.26 32.38
CDY52648 Canola plasma membrane 36.26 32.38
CDY09192 Canola plasma membrane 33.07 32.05
CDY17511 Canola plasma membrane 35.86 32.03
CDX71032 Canola plasma membrane 33.07 31.92
CDX88767 Canola plasma membrane 33.07 31.92
CDY07681 Canola plasma membrane 36.26 31.6
CDY31523 Canola plasma membrane 32.67 31.54
CDX67611 Canola plasma membrane 35.86 31.47
CDY07519 Canola plasma membrane 35.86 31.47
CDY70391 Canola extracellular, golgi 19.92 31.45
CDX78177 Canola plasma membrane 35.86 31.36
CDY56697 Canola plasma membrane 35.86 31.36
CDY14415 Canola cytosol, peroxisome, plasma membrane 35.86 31.25
CDX78265 Canola plasma membrane 35.06 30.77
CDY46759 Canola plasma membrane 34.66 30.53
CDY53629 Canola cytosol 31.47 30.5
CDX73446 Canola peroxisome 34.66 30.42
CDX90046 Canola cytosol, peroxisome, plasma membrane 34.66 30.42
CDY13298 Canola plasma membrane 34.66 30.31
CDX91341 Canola plasma membrane 34.26 30.18
CDY46758 Canola plasma membrane 33.86 30.04
CDX91340 Canola plasma membrane 33.86 29.82
CDY38017 Canola plasma membrane 33.86 29.72
CDX71738 Canola plasma membrane 33.47 29.37
CDX74777 Canola cytosol, peroxisome, plasma membrane 33.47 29.37
CDX83385 Canola cytosol, peroxisome, plasma membrane 33.47 29.37
CDY18886 Canola cytosol, peroxisome, plasma membrane 33.47 29.37
CDY27346 Canola cytosol, peroxisome, plasma membrane 33.47 29.37
CDY37078 Canola cytosol, peroxisome, plasma membrane 33.47 29.37
CDY48920 Canola plasma membrane 33.47 29.37
CDX95670 Canola cytosol, peroxisome, plasma membrane 33.07 29.02
CDY07221 Canola cytosol, peroxisome, plasma membrane 33.07 29.02
CDY51161 Canola cytosol, peroxisome, plasma membrane 33.07 29.02
CDX74983 Canola cytosol, peroxisome, plasma membrane 22.71 28.93
CDX94185 Canola plasma membrane 33.07 28.92
CDY10936 Canola plasma membrane 33.07 28.92
CDX74334 Canola cytosol, peroxisome, plasma membrane 33.07 28.82
CDX91911 Canola cytosol, peroxisome, plasma membrane 33.07 28.82
CDX74984 Canola cytosol, peroxisome, plasma membrane 33.86 27.42
CDY15165 Canola plastid 34.26 26.54
CDY66913 Canola cytosol, mitochondrion, nucleus 1.59 8.7
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.3GO:A0A078CRJ2InterPro:Aquaporin-likeInterPro:Aquaporin_transptrEnsemblPlants:CDX77768
ProteinID:CDX77768ProteinID:CDX77768.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00128804001InterPro:IPR023271
InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783ScanProsite:PS00221PANTHER:PTHR19139
PANTHER:PTHR19139:SF257SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelixUniParc:UPI0001B3534ESEG:seg
Description
BnaC07g20220D
Coordinates
chrLK031812:-:1684908..1686517
Molecular Weight (calculated)
25222.9 Da
IEP (calculated)
4.759
GRAVY (calculated)
1.028
Length
251 amino acids
Sequence
(BLAST)
001: MVKIAVGSLG DSFSVASLKA YLSEFIATLI FVFAGVGSAI AFGKITSDAA LDPAGLVAIA VAHAFALFVG VSVAANISGG HLNPAVTLGL AVGGNITLIT
101: GFLYWVAQCL GSTVACLLLV FVTNGESVPT HGVGAGLGAV EAIVMEIIVT FALVYTVYAT AADPKKGSLG TIAPIAIGFI VGANILAAGP FSGGSMNPAR
201: SFGPAIVSGD LSQIWIYWVG PLVGGALAGL IYGDVFIGSP YEAVETREIR V
Best Arabidopsis Sequence Match ( AT5G47450.1 )
(BLAST)
001: MVKIEVGSVG DSFSVSSLKA YLSEFIATLL FVFAGVGSAV AFAKLTSDGA LDPAGLVAIA IAHAFALFVG VSIAANISGG HLNPAVTLGL AIGGNITLIT
101: GFFYWIAQCL GSIVACLLLV FVTNGKSVPT HGVSAGLGAV EGVVMEIVVT FALVYTVYAT AADPKKGSLG TIAPIAIGFI VGANILAAGP FSGGSMNPAR
201: SFGPAVVSGD LSQIWIYWVG PLVGGALAGL IYGDVFIGSY EAVETREIRV
Arabidopsis Description
TIP2-3Aquaporin TIP2-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGL2]
SUBAcon: [plasma membrane,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.