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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 4
  • golgi 3
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane
Any Predictor:cytosol, mitochondrion, secretory
BaCelLo:secretory
EpiLoc:vacuole
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Plant-mPloc:vacuole
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr1P20280_001
GSMUA_Achr4P08270_001
GSMUA_Achr4P15460_001
GSMUA_Achr5P20880_001
GSMUA_Achr6P14800_001
GSMUA_Achr8P11120_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G17340.1 GSMUA_Achr4P08270_001 AT3G16310.1 21798944
AT4G17340.1 GSMUA_Achr4P15460_001 AT3G16310.1 21798944
AT4G17340.1 GSMUA_Achr6P14800_001 AT3G16310.1 21798944
AT4G17340.1 GSMUA_Achr11P... AT3G60600.1 21798944
AT4G17340.1 GSMUA_Achr11P... AT3G60600.1 21798944
AT4G17340.1 GSMUA_Achr1P20280_001 AT3G60600.1 21798944
AT4G17340.1 GSMUA_Achr5P20880_001 AT3G60600.1 21798944
AT4G17340.1 GSMUA_Achr8P11120_001 AT3G60600.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr11P... Banana extracellular, plasma membrane 94.78 94.78
Os02t0658100-01 Rice vacuole 71.49 86.41
Zm00001d051362_P001 Maize plasma membrane 85.94 85.94
Zm00001d002738_P001 Maize plasma membrane 83.94 84.27
TraesCS6D01G232100.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 83.94 83.94
TraesCS6A01G250300.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 83.94 83.94
PGSC0003DMT400030994 Potato endoplasmic reticulum, plasma membrane, vacuole 83.94 83.6
Solyc06g060760.2.1 Tomato endoplasmic reticulum 83.94 83.6
KXG31086 Sorghum golgi, plasma membrane, vacuole 83.53 83.53
HORVU0Hr1G032130.2 Barley endoplasmic reticulum, plasma membrane, vacuole 83.13 83.13
HORVU6Hr1G062980.1 Barley endoplasmic reticulum, plasma membrane, vacuole 83.13 83.13
EES12617 Sorghum plasma membrane 83.13 83.13
Zm00001d017485_P002 Maize endoplasmic reticulum, extracellular, plasma membrane 83.13 82.8
TraesCS6B01G275100.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 82.73 82.73
TraesCS2D01G411400.1 Wheat plasma membrane 81.53 81.85
TraesCS2A01G414100.1 Wheat plasma membrane 81.53 81.85
VIT_00s0229g00130.t01 Wine grape endoplasmic reticulum, plasma membrane, vacuole 81.93 81.6
TraesCS2B01G433200.1 Wheat plasma membrane 81.12 81.45
Zm00001d026177_P001 Maize extracellular 81.12 81.45
CDY65121 Canola endoplasmic reticulum, plasma membrane, vacuole 81.53 81.2
Bra026245.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 81.53 81.2
CDY64499 Canola endoplasmic reticulum, plasma membrane, vacuole 81.12 80.8
AT4G17340.1 Thale cress golgi, plasma membrane, vacuole 80.72 80.4
VIT_00s2783g00010.t01 Wine grape extracellular 39.76 79.84
AT5G47450.1 Thale cress golgi, plasma membrane 79.52 79.2
CDY51678 Canola plasma membrane, vacuole 79.12 78.8
CDY59296 Canola endoplasmic reticulum, plasma membrane, vacuole 78.71 78.09
CDX77768 Canola endoplasmic reticulum, plasma membrane, vacuole 78.71 78.09
Bra022131.1-P Field mustard extracellular 63.86 77.94
Bra024943.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 78.31 77.69
KRH28112 Soybean mitochondrion 77.11 77.11
CDY28932 Canola endoplasmic reticulum, extracellular, vacuole 64.66 76.67
KRH77347 Soybean mitochondrion 76.31 76.31
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, plastid, vacuole 73.09 74.9
Os04t0550900-00 Rice endoplasmic reticulum, extracellular, vacuole 42.57 74.65
GSMUA_Achr6P05830_001 Banana endoplasmic reticulum, extracellular, plasma membrane 72.29 73.47
GSMUA_Achr9P28940_001 Banana plasma membrane 71.89 73.06
GSMUA_Achr8P12920_001 Banana cytosol, plasma membrane, vacuole 64.26 64.0
GSMUA_Achr11P... Banana cytosol, extracellular, vacuole 63.05 62.8
GSMUA_Achr1P01270_001 Banana cytosol, plasma membrane, vacuole 62.65 62.4
GSMUA_Achr5P19470_001 Banana endoplasmic reticulum, plasma membrane, vacuole 60.64 60.16
GSMUA_Achr10P... Banana plasma membrane 59.44 58.73
GSMUA_Achr6P15380_001 Banana cytosol, plasma membrane, vacuole 57.83 57.14
AT1G52180.1 Thale cress endoplasmic reticulum, extracellular, vacuole 27.31 54.84
GSMUA_Achr2P10640_001 Banana cytosol, golgi, plasma membrane 55.82 54.72
GSMUA_Achr10P... Banana cytosol, plasma membrane, vacuole 54.22 54.22
GSMUA_Achr4P26010_001 Banana cytosol, golgi, plasma membrane 54.62 53.54
GSMUA_Achr4P24600_001 Banana golgi, plasma membrane, plastid 52.61 49.81
GSMUA_Achr9P06260_001 Banana cytosol, golgi, plasma membrane 46.59 45.49
GSMUA_Achr1P13800_001 Banana cytosol 45.78 44.88
GSMUA_Achr2P03980_001 Banana extracellular 28.51 37.37
GSMUA_Achr1P00370_001 Banana extracellular 28.11 36.84
GSMUA_Achr8P33980_001 Banana extracellular 29.32 36.68
GSMUA_Achr1P26390_001 Banana endoplasmic reticulum, extracellular, plasma membrane, plastid 28.92 36.36
GSMUA_Achr5P12400_001 Banana extracellular 27.71 36.32
GSMUA_AchrUn_... Banana extracellular 27.71 36.32
GSMUA_Achr8P11540_001 Banana extracellular 27.71 36.32
GSMUA_AchrUn_... Banana extracellular 28.11 35.9
GSMUA_Achr4P20780_001 Banana extracellular 28.11 35.71
GSMUA_AchrUn_... Banana extracellular 26.91 35.26
GSMUA_AchrUn_... Banana extracellular 26.91 35.26
GSMUA_Achr11P... Banana extracellular 27.71 35.2
GSMUA_Achr8P33990_001 Banana extracellular 27.71 34.85
GSMUA_Achr8P18910_001 Banana extracellular 26.91 34.18
GSMUA_Achr5P11480_001 Banana plasma membrane 26.91 33.84
GSMUA_Achr11P... Banana extracellular 28.51 33.18
GSMUA_Achr1P07460_001 Banana extracellular 23.29 33.14
GSMUA_Achr10P... Banana plasma membrane 28.11 32.71
GSMUA_Achr1P02360_001 Banana unclear 35.34 31.21
GSMUA_Achr2P11190_001 Banana plasma membrane 33.73 29.89
GSMUA_Achr1P26380_001 Banana plasma membrane 33.33 29.54
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.3InterPro:Aquaporin-likeInterPro:Aquaporin_transptrGO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0016021
GO:GO:0055085EnsemblPlantsGene:GSMUA_Achr11G04570_001EnsemblPlants:GSMUA_Achr11P04570_001EnsemblPlants:GSMUA_Achr11T04570_001InterPro:IPR023271UniProt:M0RPD7
InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783ScanProsite:PS00221PANTHER:PTHR19139
PANTHER:PTHR19139:SF257SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelixUniParc:UPI000294E69FSEG:seg
Description
Aquaporin TIP2-2 [Source:GMGC_GENE;Acc:GSMUA_Achr11G04570_001]
Coordinates
chr11:+:3457855..3458765
Molecular Weight (calculated)
24850.5 Da
IEP (calculated)
5.490
GRAVY (calculated)
0.934
Length
249 amino acids
Sequence
(BLAST)
001: MVKLTLGSLG DSFSAGSLKA YLAEFIATLL FVFAGVGSAI AYGKLTSGAA LDPAGLVAVA LAHGLALFVG VSMAANISGG HLNPAVTFGL AVGGHITLLT
101: GVFYWIAQLL GSTVACLLLK FVTGGMAVPT HGVAAGMSEL EGVVMEVVIT FALVYTVYAT AADPKKGPLG TVAPIAIGFI VGANILAAGP FSGGSMNPAR
201: SFGPAVASGD FSGNWVYWVG PLIGGGLAGL IYGDIFIGSY EAVAAQDYP
Best Arabidopsis Sequence Match ( AT5G47450.1 )
(BLAST)
001: MVKIEVGSVG DSFSVSSLKA YLSEFIATLL FVFAGVGSAV AFAKLTSDGA LDPAGLVAIA IAHAFALFVG VSIAANISGG HLNPAVTLGL AIGGNITLIT
101: GFFYWIAQCL GSIVACLLLV FVTNGKSVPT HGVSAGLGAV EGVVMEIVVT FALVYTVYAT AADPKKGSLG TIAPIAIGFI VGANILAAGP FSGGSMNPAR
201: SFGPAVVSGD LSQIWIYWVG PLVGGALAGL IYGDVFIGSY EAVETREIRV
Arabidopsis Description
TIP2-3Aquaporin TIP2-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGL2]
SUBAcon: [plasma membrane,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.