Factsheet for GSMUA_Achr6P15380_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:

plastid 1
vacuole 4
cytosol 1
extracellular 1
endoplasmic reticulum 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	plasma membrane	84.52	84.52
KRH23017	Soybean	cytosol, plasma membrane, vacuole	79.37	79.37
KRH29856	Soybean	cytosol, plasma membrane, vacuole	79.37	79.37
Solyc06g075650.2.1	Tomato	endoplasmic reticulum	79.37	79.05
PGSC0003DMT400077927	Potato	cytosol, plasma membrane, plastid, vacuole	78.97	78.66
KRH24847	Soybean	endoplasmic reticulum, plasma membrane, vacuole	75.79	77.96
GSMUA_Achr8P12920_001	Banana	cytosol, plasma membrane, vacuole	76.59	77.2
GSMUA_Achr1P01270_001	Banana	cytosol, plasma membrane, vacuole	76.19	76.8
GSMUA_Achr11P...	Banana	cytosol, extracellular, vacuole	76.19	76.8
KRH10300	Soybean	endoplasmic reticulum, extracellular	48.41	76.25
VIT_06s0004g04120.t01	Wine grape	cytosol, plasma membrane, vacuole	79.76	75.0
TraesCS3A01G535300.1	Wheat	plasma membrane	75.0	75.0
TraesCS3D01G540900.1	Wheat	plasma membrane	75.0	75.0
TraesCS3B01G608500.1	Wheat	plasma membrane	74.6	74.6
HORVU3Hr1G116790.2	Barley	vacuole	74.6	74.6
GSMUA_Achr5P19470_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	73.81	74.1
Zm00001d011778_P001	Maize	plasma membrane	74.6	74.02
EES04303	Sorghum	cytosol	71.83	70.16
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid, vacuole	58.33	60.49
GSMUA_Achr9P28940_001	Banana	plasma membrane	58.73	60.41
GSMUA_Achr6P05830_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	57.94	59.59
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plasma membrane	57.14	57.83
GSMUA_Achr2P10640_001	Banana	cytosol, golgi, plasma membrane	57.54	57.09
GSMUA_Achr11P...	Banana	extracellular, plasma membrane	55.95	56.63
GSMUA_Achr4P26010_001	Banana	cytosol, golgi, plasma membrane	56.75	56.3
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, vacuole	49.6	50.2
GSMUA_Achr1P13800_001	Banana	cytosol	44.44	44.09
GSMUA_Achr9P06260_001	Banana	cytosol, golgi, plasma membrane	43.25	42.75
GSMUA_Achr4P24600_001	Banana	golgi, plasma membrane, plastid	43.65	41.83
GSMUA_Achr4P20780_001	Banana	extracellular	30.16	38.78
GSMUA_AchrUn_...	Banana	extracellular	29.37	37.95
GSMUA_Achr11P...	Banana	extracellular	29.37	37.76
GSMUA_Achr1P00370_001	Banana	extracellular	27.78	36.84
GSMUA_Achr1P26390_001	Banana	endoplasmic reticulum, extracellular, plasma membrane, plastid	28.57	36.36
GSMUA_Achr2P03980_001	Banana	extracellular	27.38	36.32
GSMUA_Achr8P18910_001	Banana	extracellular	28.17	36.22
GSMUA_Achr8P33980_001	Banana	extracellular	28.17	35.68
GSMUA_Achr5P11480_001	Banana	plasma membrane	27.78	35.35
GSMUA_AchrUn_...	Banana	extracellular	26.59	35.26
GSMUA_AchrUn_...	Banana	extracellular	26.59	35.26
GSMUA_Achr5P12400_001	Banana	extracellular	26.59	35.26
GSMUA_Achr10P...	Banana	plasma membrane	29.76	35.05
GSMUA_Achr8P11540_001	Banana	extracellular	26.19	34.74
GSMUA_Achr11P...	Banana	extracellular	29.37	34.58
GSMUA_AchrUn_...	Banana	extracellular	25.79	34.21
GSMUA_Achr8P33990_001	Banana	extracellular	26.59	33.84
GSMUA_Achr1P07460_001	Banana	extracellular	22.22	32.0
GSMUA_Achr2P11190_001	Banana	plasma membrane	33.73	30.25
GSMUA_Achr1P02360_001	Banana	unclear	33.73	30.14
GSMUA_Achr1P26380_001	Banana	plasma membrane	31.35	28.11

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.3	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr6G15380_001	EnsemblPlants:GSMUA_Achr6P15380_001	EnsemblPlants:GSMUA_Achr6T15380_001	InterPro:IPR023271	UniProt:M0T786
InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221	PANTHER:PTHR19139
PANTHER:PTHR19139:SF265	SUPFAM:SSF81338	TMHMM:TMhelix	UniParc:UPI000295A1E9	:	:

Description

Aquaporin TIP1-3 [Source:GMGC_GENE;Acc:GSMUA_Achr6G15380_001]

Coordinates

chr6:-:10252515..10253899

Molecular Weight (calculated)

26033.7 Da

IEP (calculated)

5.477

GRAVY (calculated)

0.759

Length

252 amino acids

Sequence
(BLAST)

001: MPILRITIGT PEEARHPTAL KAALAEFISV LIFVFAGQGS GMAFNKLTDD GSTTPAGLVS ASLAHGFGLY VAVAVGANIS GGHVNPAVTF GAFLGGNITL
101: LRGILYWIAQ LLGSVVACLL LKFATGGLET TPFSLSSSVT VWNALVFEIV MTFGLVYTVY ATAIDPKKGN LGIIAPLAIG LVVGANILAG GAFDGASMNP
201: AVSFGPAVVS WTWDNHWVYW VGPLLGGGIA ALVYDGVFIG FGTHEQLPTT DY

Best Arabidopsis Sequence Match ( AT4G01470.1 )
(BLAST)

001: MPINRIAIGT PGEASRPDAI RAAFAEFFSM VIFVFAGQGS GMAYGKLTGD GPATPAGLVA ASLSHAFALF VAVSVGANVS GGHVNPAVTF GAFIGGNITL
101: LRAILYWIAQ LLGAVVACLL LKVSTGGMET AAFSLSYGVT PWNAVVFEIV MTFGLVYTVY ATAVDPKKGD IGIIAPLAIG LIVGANILVG GAFDGASMNP
201: AVSFGPAVVS WIWTNHWVYW VGPFIGAAIA AIVYDTIFIG SNGHEPLPSN DF

Arabidopsis Description

TIP1-3Aquaporin TIP1-3 [Source:UniProtKB/Swiss-Prot;Acc:O82598]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.