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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plastid, vacuole, plasma membrane

Predictor Summary:
  • nucleus 1
  • vacuole 4
  • endoplasmic reticulum 2
  • extracellular 1
  • plasma membrane 2
  • golgi 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane, plastid, vacuole
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:endoplasmic reticulum
Plant-mPloc:vacuole
Predotar:plastid
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr2P10640_001
GSMUA_Achr4P10230_001
GSMUA_Achr4P26010_001
GSMUA_Achr6P05830_001
GSMUA_Achr9P28940_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G16240.1 GSMUA_Achr2P10640_001 AT1G73190.1 23163742
AT3G16240.1 GSMUA_Achr4P26010_001 AT1G73190.1 23163742
AT3G16240.1 GSMUA_Achr10P... AT3G16240.1 23163742
AT3G16240.1 GSMUA_Achr6P05830_001 AT3G16240.1 23163742
AT3G16240.1 GSMUA_Achr9P28940_001 AT3G16240.1 23163742
AT3G16240.1 GSMUA_Achr4P10230_001 AT4G19030.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr9P28940_001 Banana plasma membrane 87.65 86.94
GSMUA_Achr6P05830_001 Banana endoplasmic reticulum, extracellular, plasma membrane 87.24 86.53
PGSC0003DMT400042613 Potato cytosol, extracellular, plasma membrane 81.48 79.52
Os06t0336200-01 Rice nucleus 81.07 79.44
KRH09912 Soybean endoplasmic reticulum, plasma membrane, vacuole 80.25 78.95
KRG93712 Soybean plasma membrane, vacuole 76.95 78.9
CDX82410 Canola plasma membrane 80.66 78.71
Bra001626.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 80.25 78.31
HORVU7Hr1G081770.8 Barley plasma membrane 80.25 78.31
CDY63821 Canola endoplasmic reticulum, plasma membrane, vacuole 80.25 78.31
CDY20190 Canola endoplasmic reticulum, plasma membrane, vacuole 80.25 78.31
EER89797 Sorghum plasma membrane 79.84 78.23
KRH23420 Soybean plasma membrane, vacuole 79.42 78.14
Solyc12g044330.1.1 Tomato plastid 79.42 77.82
CDY30146 Canola endoplasmic reticulum, extracellular, plasma membrane 79.42 77.82
KRH47241 Soybean mitochondrion 79.42 77.82
TraesCS7B01G243000.1 Wheat plasma membrane 79.01 77.42
TraesCS7A01G331300.1 Wheat unclear 79.01 77.42
KRH44312 Soybean extracellular 79.01 77.42
CDX97733 Canola endoplasmic reticulum, extracellular 79.01 77.42
Bra027181.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 79.01 77.42
PGSC0003DMT400068047 Potato cytosol, extracellular, plastid, vacuole 78.6 77.02
Bra021171.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 66.26 76.67
AT3G16240.1 Thale cress plasma membrane 78.19 76.0
VIT_09s0002g04020.t01 Wine grape plasma membrane, vacuole 76.54 74.7
GSMUA_Achr11P... Banana extracellular, plasma membrane 76.54 74.7
GSMUA_Achr11P... Banana endoplasmic reticulum, plasma membrane 74.9 73.09
CDY47816 Canola endoplasmic reticulum, plasma membrane, vacuole 75.31 72.33
CDX75873 Canola extracellular, golgi, vacuole 81.07 71.64
Solyc06g066560.1.1 Tomato mitochondrion 79.01 70.33
PGSC0003DMT400006558 Potato endoplasmic reticulum, plasma membrane 72.02 70.28
TraesCS7D01G339600.1 Wheat plasma membrane 79.01 68.82
GSMUA_Achr8P12920_001 Banana cytosol, plasma membrane, vacuole 64.2 62.4
GSMUA_Achr11P... Banana cytosol, extracellular, vacuole 62.55 60.8
GSMUA_Achr1P01270_001 Banana cytosol, plasma membrane, vacuole 62.14 60.4
GSMUA_Achr5P19470_001 Banana endoplasmic reticulum, plasma membrane, vacuole 60.91 58.96
GSMUA_Achr6P15380_001 Banana cytosol, plasma membrane, vacuole 60.49 58.33
GSMUA_Achr10P... Banana plasma membrane 60.49 58.33
GSMUA_Achr4P26010_001 Banana cytosol, golgi, plasma membrane 57.2 54.72
GSMUA_Achr10P... Banana cytosol, plasma membrane, vacuole 55.97 54.62
GSMUA_Achr2P10640_001 Banana cytosol, golgi, plasma membrane 55.14 52.76
GSMUA_Achr4P24600_001 Banana golgi, plasma membrane, plastid 51.03 47.15
GSMUA_Achr9P06260_001 Banana cytosol, golgi, plasma membrane 44.86 42.75
GSMUA_Achr1P13800_001 Banana cytosol 42.8 40.94
GSMUA_Achr11P... Banana extracellular 32.1 39.8
GSMUA_AchrUn_... Banana extracellular 31.69 39.49
GSMUA_Achr4P20780_001 Banana extracellular 31.69 39.29
GSMUA_Achr2P03980_001 Banana extracellular 30.04 38.42
GSMUA_Achr8P18910_001 Banana extracellular 30.86 38.27
GSMUA_Achr1P00370_001 Banana extracellular 29.22 37.37
GSMUA_Achr8P33980_001 Banana extracellular 30.45 37.19
GSMUA_Achr8P11540_001 Banana extracellular 28.81 36.84
GSMUA_Achr5P12400_001 Banana extracellular 28.81 36.84
GSMUA_AchrUn_... Banana extracellular 28.81 36.84
GSMUA_AchrUn_... Banana extracellular 28.81 36.84
GSMUA_Achr1P26390_001 Banana endoplasmic reticulum, extracellular, plasma membrane, plastid 29.63 36.36
GSMUA_Achr5P11480_001 Banana plasma membrane 29.63 36.36
GSMUA_AchrUn_... Banana extracellular 28.4 36.32
GSMUA_Achr8P33990_001 Banana extracellular 29.22 35.86
GSMUA_Achr1P07460_001 Banana extracellular 24.69 34.29
GSMUA_Achr11P... Banana extracellular 29.63 33.64
GSMUA_Achr10P... Banana plasma membrane 29.63 33.64
GSMUA_Achr2P11190_001 Banana plasma membrane 35.8 30.96
GSMUA_Achr1P02360_001 Banana unclear 35.8 30.85
GSMUA_Achr1P26380_001 Banana plasma membrane 34.57 29.89
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.3InterPro:Aquaporin-likeInterPro:Aquaporin_transptrGO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0016021
GO:GO:0055085EnsemblPlantsGene:GSMUA_Achr10G22240_001EnsemblPlants:GSMUA_Achr10P22240_001EnsemblPlants:GSMUA_Achr10T22240_001InterPro:IPR023271UniProt:M0RKE9
InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783ScanProsite:PS00221PANTHER:PTHR19139
PANTHER:PTHR19139:SF257SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelixUniParc:UPI000296C0C3SEG:seg
Description
Probable aquaporin TIP2-2 [Source:GMGC_GENE;Acc:GSMUA_Achr10G22240_001]
Coordinates
chr10:+:27491957..27493172
Molecular Weight (calculated)
24494.1 Da
IEP (calculated)
5.470
GRAVY (calculated)
0.980
Length
243 amino acids
Sequence
(BLAST)
001: MACIAFGRCD DSFSATSLKA YLAEFISTLL FVFAGVGSAI AYGKLTSGAA LDAAGLVAVA LCHGLALFVA VAIAANISGG HVNPAVTFGL ALGGQITILT
101: GLLYWVAQLL GAVVGAFLLK FATGLDTPTH SLGVGAVEGV VMEIIITFAL VYTVYATAVD PKRGSLGTVA PIAIGLIVGA NILAAGPFSG GSMNPARSFG
201: PAVASGDFAD LWVYWVGPLI GGGLAGLVYT YAYMCTDHTP LPQ
Best Arabidopsis Sequence Match ( AT3G16240.1 )
(BLAST)
001: MAGVAFGSFD DSFSLASLRA YLAEFISTLL FVFAGVGSAI AYAKLTSDAA LDTPGLVAIA VCHGFALFVA VAIGANISGG HVNPAVTFGL AVGGQITVIT
101: GVFYWIAQLL GSTAACFLLK YVTGGLAVPT HSVAAGLGSI EGVVMEIIIT FALVYTVYAT AADPKKGSLG TIAPLAIGLI VGANILAAGP FSGGSMNPAR
201: SFGPAVAAGD FSGHWVYWVG PLIGGGLAGL IYGNVFMGSS EHVPLASADF
Arabidopsis Description
TIP2-1Aquaporin TIP2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q41951]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.