Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 2
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU1Hr1G043890.2 | |
| HORVU2Hr1G038740.1 | |
| HORVU7Hr1G081770.8 | |
| HORVU7Hr1G088900.1 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G243000.1 | Wheat | plasma membrane | 95.18 | 95.56 |
| TraesCS7A01G331300.1 | Wheat | unclear | 94.78 | 95.16 |
| EER89797 | Sorghum | plasma membrane | 89.96 | 90.32 |
| Os06t0336200-01 | Rice | nucleus | 89.96 | 90.32 |
| TraesCS7D01G339600.1 | Wheat | plasma membrane | 95.18 | 84.95 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane, plastid, vacuole | 78.31 | 80.25 |
| GSMUA_Achr9P28940_001 | Banana | plasma membrane | 78.71 | 80.0 |
| GSMUA_Achr6P05830_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 77.91 | 79.18 |
| PGSC0003DMT400042613 | Potato | cytosol, extracellular, plasma membrane | 78.31 | 78.31 |
| Solyc12g044330.1.1 | Tomato | plastid | 77.91 | 78.23 |
| KRH09912 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 76.31 | 76.92 |
| KRG93712 | Soybean | plasma membrane, vacuole | 73.09 | 76.79 |
| PGSC0003DMT400068047 | Potato | cytosol, extracellular, plastid, vacuole | 76.31 | 76.61 |
| KRH47241 | Soybean | mitochondrion | 75.5 | 75.81 |
| KRH44312 | Soybean | extracellular | 75.5 | 75.81 |
| KRH23420 | Soybean | plasma membrane, vacuole | 75.1 | 75.71 |
| CDX82410 | Canola | plasma membrane | 74.7 | 74.7 |
| Bra001626.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 74.3 | 74.3 |
| CDY63821 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 73.9 | 73.9 |
| CDY20190 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 73.9 | 73.9 |
| CDY30146 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 73.49 | 73.79 |
| CDX97733 | Canola | endoplasmic reticulum, extracellular | 73.49 | 73.79 |
| Bra027181.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 73.49 | 73.79 |
| AT3G16240.1 | Thale cress | plasma membrane | 72.29 | 72.0 |
| Bra021171.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 60.64 | 71.9 |
| PGSC0003DMT400006558 | Potato | endoplasmic reticulum, plasma membrane | 69.88 | 69.88 |
| VIT_09s0002g04020.t01 | Wine grape | plasma membrane, vacuole | 69.88 | 69.88 |
| HORVU6Hr1G062980.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 69.88 | 69.88 |
| HORVU0Hr1G032130.2 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 69.88 | 69.88 |
| Solyc06g066560.1.1 | Tomato | mitochondrion | 74.7 | 68.13 |
| CDX75873 | Canola | extracellular, golgi, vacuole | 75.1 | 68.0 |
| CDY47816 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 64.66 | 63.64 |
| HORVU4Hr1G079230.1 | Barley | vacuole | 63.45 | 63.2 |
| HORVU3Hr1G116790.2 | Barley | vacuole | 55.02 | 54.37 |
| HORVU1Hr1G043890.2 | Barley | mitochondrion | 47.79 | 45.25 |
| HORVU4Hr1G085250.2 | Barley | plastid | 42.57 | 35.22 |
| HORVU3Hr1G031620.5 | Barley | nucleus, peroxisome, plastid | 42.17 | 33.02 |
| HORVU2Hr1G089940.3 | Barley | plasma membrane | 36.95 | 31.72 |
| HORVU0Hr1G014490.7 | Barley | plastid | 37.35 | 31.31 |
| HORVU5Hr1G125600.1 | Barley | golgi, peroxisome, plasma membrane | 36.14 | 30.93 |
| HORVU2Hr1G089970.3 | Barley | endoplasmic reticulum, extracellular | 10.44 | 30.59 |
| HORVU6Hr1G058930.20 | Barley | golgi, plasma membrane | 34.54 | 29.76 |
| HORVU6Hr1G064140.1 | Barley | golgi, peroxisome, plasma membrane | 34.54 | 29.66 |
| HORVU2Hr1G038740.1 | Barley | golgi, mitochondrion, plasma membrane | 38.96 | 28.45 |
| HORVU2Hr1G097780.15 | Barley | golgi, mitochondrion, plastid | 30.52 | 28.25 |
| HORVU6Hr1G014300.1 | Barley | cytosol, golgi, peroxisome | 32.93 | 28.08 |
| HORVU2Hr1G010990.2 | Barley | plasma membrane | 35.74 | 27.99 |
| HORVU5Hr1G084230.1 | Barley | extracellular, golgi, mitochondrion | 34.94 | 27.97 |
| HORVU5Hr1G055200.4 | Barley | golgi, plastid | 34.54 | 27.65 |
| HORVU5Hr1G029550.2 | Barley | plasma membrane | 33.73 | 26.42 |
| HORVU0Hr1G011280.5 | Barley | cytosol | 27.71 | 26.34 |
| HORVU5Hr1G027240.4 | Barley | plasma membrane | 33.33 | 26.1 |
| HORVU3Hr1G031680.1 | Barley | vacuole | 25.3 | 23.51 |
| HORVU7Hr1G038940.1 | Barley | golgi | 17.27 | 21.08 |
| HORVU2Hr1G089820.6 | Barley | golgi | 22.09 | 19.23 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.3 | UniProt:A0A287X340 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | EnsemblPlantsGene:HORVU7Hr1G081770 | EnsemblPlants:HORVU7Hr1G081770.8 | InterPro:IPR023271 | InterPro:MIP |
| InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF266 |
| SUPFAM:SSF81338 | TIGRFAMs:TIGR00861 | TMHMM:TMhelix | UniParc:UPI000B46B948 | SEG:seg | : |
Description
No Description!
Coordinates
chrchr7H:+:488307618..488308554
Molecular Weight (calculated)
25329.9 Da
IEP (calculated)
6.062
GRAVY (calculated)
0.873
Length
249 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGSIAFGRF DDSFSVASLK AYVAEFISTL IFVFAGVGSA IAYTKVSGGA PLDPSGLIAV AICHGFGLFV AVAIGANISG GHVNPAVTFG LALGGQITIL
101: TGLFYWVAQL LGAIVGAFLV QFCTGVVPTP THGLSGVGAF EGVVMEIIVT FGLVYTVYAT AADPKKGSLG TIAPIAIGFI VGANILVAGP FSGGSMNPAR
201: SFGPAVASGD FTNIWIYWAG PLIGGGLAGI VYRYLYMCDN HTPVASNDY
101: TGLFYWVAQL LGAIVGAFLV QFCTGVVPTP THGLSGVGAF EGVVMEIIVT FGLVYTVYAT AADPKKGSLG TIAPIAIGFI VGANILVAGP FSGGSMNPAR
201: SFGPAVASGD FTNIWIYWAG PLIGGGLAGI VYRYLYMCDN HTPVASNDY
001: MPTRNIAIGG VQEEVYHPNA LRAALAEFIS TLIFVFAGSG SGIAFNKITD NGATTPSGLV AAALAHAFGL FVAVSVGANI SGGHVNPAVT FGVLLGGNIT
101: LLRGILYWIA QLLGSVAACF LLSFATGGEP IPAFGLSAGV GSLNALVFEI VMTFGLVYTV YATAVDPKNG SLGTIAPIAI GFIVGANILA GGAFSGASMN
201: PAVAFGPAVV SWTWTNHWVY WAGPLIGGGL AGIIYDFVFI DENAHEQLPT TDY
101: LLRGILYWIA QLLGSVAACF LLSFATGGEP IPAFGLSAGV GSLNALVFEI VMTFGLVYTV YATAVDPKNG SLGTIAPIAI GFIVGANILA GGAFSGASMN
201: PAVAFGPAVV SWTWTNHWVY WAGPLIGGGL AGIIYDFVFI DENAHEQLPT TDY
Arabidopsis Description
TIP1-2Aquaporin TIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q41963]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.