Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, golgi, plastid
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G411500.1 | Wheat | endoplasmic reticulum | 64.68 | 66.41 |
| TraesCS2B01G433300.1 | Wheat | endoplasmic reticulum | 60.97 | 66.13 |
| TraesCS2A01G414200.1 | Wheat | plastid | 63.94 | 65.65 |
| Os04t0550800-01 | Rice | endoplasmic reticulum, plasma membrane | 55.76 | 55.76 |
| OQU82093 | Sorghum | plasma membrane | 55.02 | 55.43 |
| Zm00001d026178_P002 | Maize | plastid | 50.19 | 50.56 |
| GSMUA_Achr4P24600_001 | Banana | golgi, plasma membrane, plastid | 48.7 | 49.81 |
| VIT_16s0022g00330.t01 | Wine grape | cytosol, extracellular, plasma membrane, plastid | 41.26 | 44.58 |
| Solyc03g093230.2.1 | Tomato | plastid | 40.15 | 43.03 |
| PGSC0003DMT400038394 | Potato | plastid | 40.15 | 43.03 |
| AT3G47440.1 | Thale cress | mitochondrion, plastid | 35.69 | 37.5 |
| Bra018148.1-P | Field mustard | extracellular, plasma membrane, plastid | 35.32 | 37.25 |
| CDX99048 | Canola | mitochondrion, plastid | 35.32 | 36.82 |
| KRH39857 | Soybean | plastid | 34.2 | 36.51 |
| CDY47413 | Canola | mitochondrion, plastid | 34.94 | 36.43 |
| HORVU0Hr1G032130.2 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 33.09 | 35.74 |
| HORVU6Hr1G062980.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 33.09 | 35.74 |
| VIT_15s0021g02420.t01 | Wine grape | extracellular | 30.86 | 33.07 |
| HORVU7Hr1G081770.8 | Barley | plasma membrane | 28.25 | 30.52 |
| HORVU3Hr1G116790.2 | Barley | vacuole | 27.14 | 28.97 |
| KRH23943 | Soybean | plasma membrane | 19.33 | 28.42 |
| HORVU4Hr1G079230.1 | Barley | vacuole | 26.02 | 28.0 |
| HORVU1Hr1G043890.2 | Barley | mitochondrion | 25.65 | 26.24 |
| HORVU6Hr1G064140.1 | Barley | golgi, peroxisome, plasma membrane | 22.3 | 20.69 |
| HORVU4Hr1G085250.2 | Barley | plastid | 22.68 | 20.27 |
| HORVU3Hr1G031680.1 | Barley | vacuole | 20.07 | 20.15 |
| HORVU3Hr1G031620.5 | Barley | nucleus, peroxisome, plastid | 23.05 | 19.5 |
| HORVU5Hr1G125600.1 | Barley | golgi, peroxisome, plasma membrane | 20.07 | 18.56 |
| HORVU6Hr1G014300.1 | Barley | cytosol, golgi, peroxisome | 20.07 | 18.49 |
| HORVU5Hr1G055200.4 | Barley | golgi, plastid | 21.19 | 18.33 |
| HORVU0Hr1G014490.7 | Barley | plastid | 19.7 | 17.85 |
| HORVU2Hr1G089940.3 | Barley | plasma membrane | 18.96 | 17.59 |
| HORVU6Hr1G058930.20 | Barley | golgi, plasma membrane | 18.59 | 17.3 |
| HORVU2Hr1G010990.2 | Barley | plasma membrane | 19.33 | 16.35 |
| HORVU2Hr1G038740.1 | Barley | golgi, mitochondrion, plasma membrane | 20.45 | 16.13 |
| HORVU5Hr1G027240.4 | Barley | plasma membrane | 18.22 | 15.41 |
| HORVU5Hr1G029550.2 | Barley | plasma membrane | 18.22 | 15.41 |
| HORVU7Hr1G038940.1 | Barley | golgi | 11.52 | 15.2 |
| HORVU5Hr1G084230.1 | Barley | extracellular, golgi, mitochondrion | 17.47 | 15.11 |
| HORVU0Hr1G011280.5 | Barley | cytosol | 13.75 | 14.12 |
| HORVU2Hr1G089820.6 | Barley | golgi | 14.87 | 13.99 |
| HORVU2Hr1G089970.3 | Barley | endoplasmic reticulum, extracellular | 2.23 | 7.06 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:35.1 | UniProt:A0A287J300 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0000003 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0006810 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015204 |
| GO:GO:0015250 | GO:GO:0015267 | GO:GO:0015840 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0030154 |
| GO:GO:0048235 | GO:GO:0055085 | GO:GO:0090406 | EnsemblPlantsGene:HORVU2Hr1G097780 | EnsemblPlants:HORVU2Hr1G097780.15 | InterPro:IPR023271 |
| InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 |
| PANTHER:PTHR19139:SF54 | SUPFAM:SSF81338 | TMHMM:TMhelix | UniParc:UPI000B467C16 | SEG:seg | : |
Description
No Description!
Coordinates
chrchr2H:+:680442199..680447312
Molecular Weight (calculated)
25208.6 Da
IEP (calculated)
9.747
GRAVY (calculated)
0.446
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: ASNLRVHLKH CFSPPSLRSY FAEFISTFLF VFTAVGSAIS ARMLTPDVTS NASSLVATAV AQSFGLFAAV FIAADVSGGH VNPAVTFAFA IGGHIGVPTA
101: IFYWTCQLLG STLACLVLHF LSAGQAVPTT RIAVEMTGFG ASIVEGVMTF MVVYTVHVAG XXXXXXXXXX XXXXXGVMTF MVVYTVHVAG XXXXXXXXXX
201: XHEPRAVVRA GGCQRRLQEP GRVLGRPDDR RGRGGAGASE PGVPVRAGAA AARVAPRERG NGGGTNVCL
101: IFYWTCQLLG STLACLVLHF LSAGQAVPTT RIAVEMTGFG ASIVEGVMTF MVVYTVHVAG XXXXXXXXXX XXXXXGVMTF MVVYTVHVAG XXXXXXXXXX
201: XHEPRAVVRA GGCQRRLQEP GRVLGRPDDR RGRGGAGASE PGVPVRAGAA AARVAPRERG NGGGTNVCL
001: MRRMIPTSFS SKFQGVLSMN ALRCYVSEFI STFFFVLAAV GSVMSSRKLM AGDVSGPFGV LIPAIANALA LSSSVYISWN VSGGHVNPAV TFAMAVAGRI
101: SVPTAMFYWT SQMIASVMAC LVLKVTVMEQ HVPIYKIAGE MTGFGASVLE GVLAFVLVYT VFTASDPRRG LPLAVGPIFI GFVAGANVLA AGPFSGGSMN
201: PACAFGSAMV YGSFKNQAVY WVGPLLGGAT AALVYDNVVV PVEDDRGSST GDAIGV
101: SVPTAMFYWT SQMIASVMAC LVLKVTVMEQ HVPIYKIAGE MTGFGASVLE GVLAFVLVYT VFTASDPRRG LPLAVGPIFI GFVAGANVLA AGPFSGGSMN
201: PACAFGSAMV YGSFKNQAVY WVGPLLGGAT AALVYDNVVV PVEDDRGSST GDAIGV
Arabidopsis Description
TIP5-1Probable aquaporin TIP5-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9STX9]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.