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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plasma membrane, golgi

Predictor Summary:
  • mitochondrion 2
  • golgi 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, mitochondrion, plasma membrane
Any Predictor:golgi, mitochondrion, plasma membrane
iPSORT:mitochondrion
MultiLoc:golgi
TargetP:mitochondrion
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU1Hr1G076010.1
HORVU2Hr1G010990.2
HORVU2Hr1G038740.1
HORVU3Hr1G026980.2
HORVU3Hr1G071060.1
HORVU5Hr1G055200.4
HORVU6Hr1G064140.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G37180.1 HORVU5Hr1G055200.4 AT1G01620.1 21798944
AT2G37180.1 HORVU6Hr1G064140.1 AT1G01620.1 21798944
AT2G37180.1 HORVU2Hr1G010990.2 AT2G16850.1 21798944
AT2G37180.1 HORVU1Hr1G076010.1 AT3G16310.1 21798944
AT2G37180.1 HORVU3Hr1G026980.2 AT3G16310.1 21798944
AT2G37180.1 HORVU3Hr1G071060.1 AT3G16310.1 21798944
AT2G37180.1 HORVU2Hr1G038740.1 AT3G54820.1 21798944
AT2G37180.1 HORVU5Hr1G055200.4 AT3G61430.1 21798944
AT2G37180.1 HORVU6Hr1G064140.1 AT3G61430.1 21798944
AT2G37180.1 HORVU5Hr1G055200.4 AT4G23400.1 21798944
AT2G37180.1 HORVU6Hr1G064140.1 AT4G23400.1 21798944
AT2G37180.1 HORVU2Hr1G010990.2 AT4G35100.1 21798944
AT3G53420.1 HORVU2Hr1G038740.1 AT3G53420.1 19258017
AT3G54820.1 HORVU5Hr1G055200.4 AT1G01620.1 21798944
AT3G54820.1 HORVU6Hr1G064140.1 AT1G01620.1 21798944
AT3G54820.1 HORVU2Hr1G010990.2 AT2G16850.1 21798944
AT3G54820.1 HORVU5Hr1G055200.4 AT3G61430.1 21798944
AT3G54820.1 HORVU6Hr1G064140.1 AT3G61430.1 21798944
AT3G54820.1 HORVU5Hr1G055200.4 AT4G00430.1 21798944
AT3G54820.1 HORVU6Hr1G064140.1 AT4G00430.1 21798944
AT3G54820.1 HORVU2Hr1G010990.2 AT4G35100.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G198500.1 Wheat plasma membrane 84.46 99.31
TraesCS2D01G206300.1 Wheat golgi 84.46 99.31
TraesCS2B01G225900.1 Wheat golgi 84.16 98.97
Zm00001d019563_P006 Maize plasma membrane 77.13 90.69
Os07t0448800-01 Rice plasma membrane 77.13 90.69
EER98451 Sorghum plasma membrane 77.13 90.69
Zm00001d005421_P001 Maize plasma membrane 76.25 89.04
PGSC0003DMT400053882 Potato extracellular 49.56 86.22
KRG91899 Soybean plasma membrane 71.55 85.92
VIT_06s0004g02850.t01 Wine grape plasma membrane 70.38 85.71
CDY70391 Canola extracellular, golgi 39.88 85.53
VIT_13s0019g04280.t01 Wine grape plasma membrane 70.97 85.21
PGSC0003DMT400027154 Potato plasma membrane 68.62 83.27
HORVU2Hr1G089940.3 Barley plasma membrane 70.67 83.1
Solyc10g084120.1.1 Tomato nucleus 68.33 82.92
KRH70183 Soybean mitochondrion 69.21 82.81
PGSC0003DMT400053877 Potato plasma membrane 67.74 82.8
Bra005216.1-P Field mustard cytosol, golgi, plasma membrane 56.01 82.68
Bra023103.1-P Field mustard plasma membrane 68.92 82.46
KRH08522 Soybean plasma membrane 68.92 82.46
KRH08523 Soybean plasma membrane 68.92 82.46
KRH70184 Soybean plasma membrane 68.92 82.46
CDY46759 Canola plasma membrane 68.92 82.46
KRH34875 Soybean plasma membrane 71.55 82.43
CDY46758 Canola plasma membrane 68.33 82.33
Bra023102.1-P Field mustard plasma membrane 68.33 82.33
Solyc09g007770.2.1 Tomato nucleus 62.46 82.24
CDX91340 Canola plasma membrane 68.33 81.75
Bra006997.1-P Field mustard plasma membrane 68.62 81.53
CDX78177 Canola plasma membrane 68.62 81.53
KRH25011 Soybean mitochondrion 68.33 81.47
KRH29919 Soybean mitochondrion 68.33 81.47
AT3G54820.1 Thale cress plasma membrane 68.33 81.47
CDY56697 Canola plasma membrane 68.33 81.18
VIT_08s0040g01890.t01 Wine grape plasma membrane 68.33 81.18
AT3G53420.1 Thale cress plasma membrane 68.33 81.18
Bra005215.1-P Field mustard cytosol, peroxisome, plasma membrane 56.6 81.09
CDX91341 Canola plasma membrane 67.74 81.05
CDX67611 Canola plasma membrane 67.74 80.77
CDX74983 Canola cytosol, peroxisome, plasma membrane 46.63 80.71
CDY13298 Canola plasma membrane 67.74 80.49
CDY07519 Canola plasma membrane 67.45 80.42
AT2G37180.1 Thale cress plasma membrane 66.86 80.0
HORVU2Hr1G089970.3 Barley endoplasmic reticulum, extracellular 19.94 80.0
KRH26410 Soybean golgi, peroxisome, plasma membrane 67.16 79.79
Bra003196.1-P Field mustard plasma membrane 66.86 79.72
Bra007100.1-P Field mustard plasma membrane 66.86 79.72
CDX78265 Canola plasma membrane 66.86 79.72
CDX73446 Canola peroxisome 66.57 79.37
KRG95980 Soybean plasma membrane 65.98 78.95
KRH22889 Soybean golgi, peroxisome, plasma membrane 66.28 78.75
KRH67688 Soybean plasma membrane 65.69 78.32
HORVU6Hr1G058930.20 Barley golgi, plasma membrane 65.1 76.82
CDX74984 Canola cytosol, peroxisome, plasma membrane 68.33 75.16
PGSC0003DMT400053881 Potato plasma membrane 67.16 74.59
Solyc09g007760.2.1 Tomato extracellular 66.28 73.86
AT2G37170.2 Thale cress plasma membrane 69.5 72.26
HORVU0Hr1G014490.7 Barley plastid 62.46 71.72
HORVU5Hr1G125600.1 Barley golgi, peroxisome, plasma membrane 59.53 69.76
HORVU0Hr1G011280.5 Barley cytosol 52.2 67.94
HORVU5Hr1G027240.4 Barley plasma membrane 63.34 67.92
HORVU5Hr1G029550.2 Barley plasma membrane 63.05 67.61
HORVU6Hr1G064140.1 Barley golgi, peroxisome, plasma membrane 56.3 66.21
HORVU6Hr1G014300.1 Barley cytosol, golgi, peroxisome 56.3 65.75
HORVU5Hr1G055200.4 Barley golgi, plastid 57.18 62.7
HORVU5Hr1G084230.1 Barley extracellular, golgi, mitochondrion 56.89 62.38
HORVU2Hr1G010990.2 Barley plasma membrane 57.18 61.32
HORVU2Hr1G089820.6 Barley golgi 44.28 52.8
HORVU7Hr1G038940.1 Barley golgi 28.74 48.04
HORVU6Hr1G062980.1 Barley endoplasmic reticulum, plasma membrane, vacuole 29.03 39.76
HORVU0Hr1G032130.2 Barley endoplasmic reticulum, plasma membrane, vacuole 29.03 39.76
HORVU7Hr1G081770.8 Barley plasma membrane 28.45 38.96
HORVU3Hr1G116790.2 Barley vacuole 27.57 37.3
HORVU4Hr1G079230.1 Barley vacuole 26.69 36.4
HORVU1Hr1G043890.2 Barley mitochondrion 24.05 31.18
HORVU3Hr1G031620.5 Barley nucleus, peroxisome, plastid 23.75 25.47
HORVU4Hr1G085250.2 Barley plastid 22.29 25.25
HORVU2Hr1G097780.15 Barley golgi, mitochondrion, plastid 16.13 20.45
HORVU3Hr1G031680.1 Barley vacuole 14.08 17.91
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.2UniProt:A0A287HRN9InterPro:Aquaporin-likeInterPro:Aquaporin_transptrGO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020
GO:GO:0016021GO:GO:0055085EnsemblPlantsGene:HORVU2Hr1G038740EnsemblPlants:HORVU2Hr1G038740.1InterPro:IPR023271InterPro:MIP
InterPro:MIP_CSPFAM:PF00230PRINTS:PR00783ScanProsite:PS00221PANTHER:PTHR19139PANTHER:PTHR19139:SF260
SUPFAM:SSF81338TIGRFAMs:TIGR00861TMHMM:TMhelixUniParc:UPI000B485F97::
Description
No Description!
Coordinates
chrchr2H:-:183517995..183520951
Molecular Weight (calculated)
36059.9 Da
IEP (calculated)
8.996
GRAVY (calculated)
0.478
Length
341 amino acids
Sequence
(BLAST)
001: GASSTTHPRL VVFYYLPLLP RSINTTFLPS LPHHTQAPTP FFSSEKKPHT LMAKDEVMET GGGGDFAAKD YTDPPPAPLV DAAELASWSL YRAVIAEFIA
101: TLLFLYITVA TVIGYKHQTD PAVNSAADAA CGGVGVLGIA WAFGGMIFVL VYCTAGISGG HINPAVTFGL FLARKVSLVR ALLYMVAQCL GAMCGVGLVK
201: AFQSAYFVRY GGGANTLAAG YSKGTGLAAE IIGTFVLVYT VFSATDPKRS ARDSHVPVLA PLPIGFAVFM VHLATIPITG TGINPARSLG AAVIYNKDKA
301: WDDQWIFWVG PMIGAAIAAF YHQYILRAGA IKALGSFRSN A
Best Arabidopsis Sequence Match ( AT3G54820.1 )
(BLAST)
001: MTKEVVGDKR SFSGKDYQDP PPEPLFDATE LGKWSFYRAL IAEFIATLLF LYVTIMTVIG YKSQTDPALN PDQCTGVGVL GIAWAFGGMI FILVYCTAGI
101: SGGHINPAVT FGLLLARKVT LVRAVMYMVA QCLGAICGVA LVKAFQSAYF TRYGGGANGL SDGYSIGTGV AAEIIGTFVL VYTVFSATDP KRSARDSHVP
201: VLAPLPIGFA VFIVHLATIP ITGTGINPAR SLGAAIIYNK DKAWDHHWIF WVGPFAGAAI AAFYHQFVLR AGAIKALGSF RSQPHV
Arabidopsis Description
PIP2-5Probable aquaporin PIP2-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV31]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.