Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plastid:
22160430
golgi: 23128297 |
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G225900.1 | Wheat | golgi | 99.66 | 99.66 |
| TraesCS2A01G198500.1 | Wheat | plasma membrane | 99.31 | 99.31 |
| Zm00001d019563_P006 | Maize | plasma membrane | 90.69 | 90.69 |
| Os07t0448800-01 | Rice | plasma membrane | 90.69 | 90.69 |
| EER98451 | Sorghum | plasma membrane | 90.69 | 90.69 |
| Zm00001d005421_P001 | Maize | plasma membrane | 88.97 | 88.36 |
| VIT_06s0004g02850.t01 | Wine grape | plasma membrane | 83.45 | 86.43 |
| KRG91899 | Soybean | plasma membrane | 84.14 | 85.92 |
| PGSC0003DMT400053882 | Potato | extracellular | 57.93 | 85.71 |
| TraesCS6D01G212900.1 | Wheat | golgi, plasma membrane | 84.14 | 85.31 |
| CDY70391 | Canola | extracellular, golgi | 46.55 | 84.91 |
| VIT_13s0019g04280.t01 | Wine grape | plasma membrane | 83.1 | 84.86 |
| HORVU2Hr1G038740.1 | Barley | golgi, mitochondrion, plasma membrane | 99.31 | 84.46 |
| TraesCS2D01G376000.1 | Wheat | golgi | 83.79 | 83.79 |
| PGSC0003DMT400027154 | Potato | plasma membrane | 80.69 | 83.27 |
| TraesCS2D01G376100.1 | Wheat | plasma membrane | 83.1 | 83.1 |
| Solyc10g084120.1.1 | Tomato | nucleus | 80.34 | 82.92 |
| KRH70183 | Soybean | mitochondrion | 81.38 | 82.81 |
| PGSC0003DMT400053877 | Potato | plasma membrane | 79.66 | 82.8 |
| KRH70184 | Soybean | plasma membrane | 81.03 | 82.46 |
| KRH08522 | Soybean | plasma membrane | 81.03 | 82.46 |
| KRH08523 | Soybean | plasma membrane | 81.03 | 82.46 |
| Bra005216.1-P | Field mustard | cytosol, golgi, plasma membrane | 65.52 | 82.25 |
| Solyc09g007770.2.1 | Tomato | nucleus | 73.45 | 82.24 |
| TraesCS5D01G112500.1 | Wheat | plasma membrane | 81.03 | 82.17 |
| Bra023103.1-P | Field mustard | plasma membrane | 80.69 | 82.11 |
| CDY46759 | Canola | plasma membrane | 80.69 | 82.11 |
| CDY46758 | Canola | plasma membrane | 80.0 | 81.98 |
| Bra023102.1-P | Field mustard | plasma membrane | 80.0 | 81.98 |
| AT3G53420.1 | Thale cress | plasma membrane | 81.03 | 81.88 |
| KRH34875 | Soybean | plasma membrane | 83.45 | 81.76 |
| CDX91340 | Canola | plasma membrane | 80.0 | 81.4 |
| CDX78177 | Canola | plasma membrane | 80.34 | 81.18 |
| Bra006997.1-P | Field mustard | plasma membrane | 80.34 | 81.18 |
| KRH25011 | Soybean | mitochondrion | 80.0 | 81.12 |
| KRH29919 | Soybean | mitochondrion | 80.0 | 81.12 |
| AT3G54820.1 | Thale cress | plasma membrane | 80.0 | 81.12 |
| CDY56697 | Canola | plasma membrane | 80.0 | 80.84 |
| CDX91341 | Canola | plasma membrane | 79.31 | 80.7 |
| Bra005215.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 66.21 | 80.67 |
| KRH26410 | Soybean | golgi, peroxisome, plasma membrane | 79.66 | 80.49 |
| VIT_08s0040g01890.t01 | Wine grape | plasma membrane | 79.66 | 80.49 |
| CDX67611 | Canola | plasma membrane | 79.31 | 80.42 |
| CDX74983 | Canola | cytosol, peroxisome, plasma membrane | 54.48 | 80.2 |
| CDY13298 | Canola | plasma membrane | 79.31 | 80.14 |
| CDY07519 | Canola | plasma membrane | 78.97 | 80.07 |
| AT2G37180.1 | Thale cress | plasma membrane | 78.28 | 79.65 |
| KRH22889 | Soybean | golgi, peroxisome, plasma membrane | 78.62 | 79.44 |
| Bra003196.1-P | Field mustard | plasma membrane | 78.28 | 79.37 |
| Bra007100.1-P | Field mustard | plasma membrane | 78.28 | 79.37 |
| CDX78265 | Canola | plasma membrane | 78.28 | 79.37 |
| CDX73446 | Canola | peroxisome | 77.93 | 79.02 |
| KRG95980 | Soybean | plasma membrane | 77.24 | 78.6 |
| KRH67688 | Soybean | plasma membrane | 76.9 | 77.97 |
| TraesCS5D01G561700.1 | Wheat | golgi, peroxisome, plasma membrane | 75.52 | 77.11 |
| TraesCS2D01G063900.1 | Wheat | plasma membrane | 74.83 | 76.41 |
| CDX74984 | Canola | cytosol, peroxisome, plasma membrane | 80.0 | 74.84 |
| PGSC0003DMT400053881 | Potato | plasma membrane | 78.97 | 74.59 |
| Solyc09g007760.2.1 | Tomato | extracellular | 77.93 | 73.86 |
| TraesCS5D01G560400.1 | Wheat | golgi, peroxisome, plasma membrane | 71.03 | 70.79 |
| AT2G37170.2 | Thale cress | plasma membrane | 79.66 | 70.43 |
| TraesCS5D01G548900.1 | Wheat | golgi, peroxisome, plasma membrane | 70.0 | 70.24 |
| TraesCS4D01G355600.1 | Wheat | golgi, peroxisome, plasma membrane | 70.69 | 70.21 |
| TraesCS6D01G227500.1 | Wheat | golgi | 66.55 | 66.55 |
| TraesCS6D01G389500.1 | Wheat | plasma membrane | 66.9 | 66.44 |
| TraesCS5D01G185400.1 | Wheat | plasma membrane | 66.21 | 65.75 |
| TraesCS6D01G389400.1 | Wheat | plasma membrane | 66.21 | 65.75 |
| TraesCS5D01G338200.1 | Wheat | plasma membrane | 65.86 | 65.64 |
| TraesCS6D01G076400.1 | Wheat | golgi, peroxisome, plasma membrane | 66.21 | 65.08 |
| TraesCS7D01G192200.1 | Wheat | golgi, peroxisome, plasma membrane | 59.66 | 56.91 |
| TraesCS2D01G404800.2 | Wheat | golgi, peroxisome, plasma membrane | 61.38 | 56.69 |
| TraesCS6D01G232100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 33.79 | 39.36 |
| TraesCS2D01G411400.1 | Wheat | plasma membrane | 32.76 | 38.31 |
| TraesCS3D01G540900.1 | Wheat | plasma membrane | 32.07 | 36.9 |
| TraesCS3D01G163400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 30.34 | 35.77 |
| TraesCS4D01G308800.1 | Wheat | golgi, plasma membrane, vacuole | 31.38 | 35.41 |
| TraesCS7D01G339600.1 | Wheat | plasma membrane | 33.1 | 34.41 |
| TraesCS2D01G370800.1 | Wheat | plasma membrane | 29.31 | 32.08 |
| TraesCS2D01G411500.1 | Wheat | endoplasmic reticulum | 28.28 | 31.3 |
| TraesCS1D01G175200.1 | Wheat | unclear | 27.93 | 30.8 |
| TraesCS4D01G344300.1 | Wheat | plasma membrane | 25.86 | 29.41 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.2 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 | GO:GO:0055085 |
| InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 |
| PANTHER:PTHR19139 | PANTHER:PTHR19139:SF260 | SUPFAM:SSF81338 | TIGRFAMs:TIGR00861 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS2D01G206300 |
| EnsemblPlants:TraesCS2D01G206300.1 | TIGR:cd00333 | : | : | : | : |
Description
No Description!
Coordinates
chr2D:+:159573811..159576334
Molecular Weight (calculated)
30374.1 Da
IEP (calculated)
8.289
GRAVY (calculated)
0.603
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKDEVMETG GGGDFAAKDY TDPPPAPLID AAELASWSLY RAVIAEFIAT LLFLYITVAT VIGYKHQTDP AVNSAADAAC GGVGVLGIAW AFGGMIFVLV
101: YCTAGISGGH INPAVTFGLF LARKVSLVRA LLYMIAQCLG AMCGVGLVKA FQSAYFVRYG GGANTLAAGY SKGTGLAAEI IGTFVLVYTV FSATDPKRSA
201: RDSHVPVLAP LPIGFAVFMV HLATIPITGT GINPARSLGA AVIYNKDKAW DDQWIFWVGP MIGAAIAAFY HQYILRAGAI KALGSFRSNA
101: YCTAGISGGH INPAVTFGLF LARKVSLVRA LLYMIAQCLG AMCGVGLVKA FQSAYFVRYG GGANTLAAGY SKGTGLAAEI IGTFVLVYTV FSATDPKRSA
201: RDSHVPVLAP LPIGFAVFMV HLATIPITGT GINPARSLGA AVIYNKDKAW DDQWIFWVGP MIGAAIAAFY HQYILRAGAI KALGSFRSNA
001: MTKEVVGDKR SFSGKDYQDP PPEPLFDATE LGKWSFYRAL IAEFIATLLF LYVTIMTVIG YKSQTDPALN PDQCTGVGVL GIAWAFGGMI FILVYCTAGI
101: SGGHINPAVT FGLLLARKVT LVRAVMYMVA QCLGAICGVA LVKAFQSAYF TRYGGGANGL SDGYSIGTGV AAEIIGTFVL VYTVFSATDP KRSARDSHVP
201: VLAPLPIGFA VFIVHLATIP ITGTGINPAR SLGAAIIYNK DKAWDHHWIF WVGPFAGAAI AAFYHQFVLR AGAIKALGSF RSQPHV
101: SGGHINPAVT FGLLLARKVT LVRAVMYMVA QCLGAICGVA LVKAFQSAYF TRYGGGANGL SDGYSIGTGV AAEIIGTFVL VYTVFSATDP KRSARDSHVP
201: VLAPLPIGFA VFIVHLATIP ITGTGINPAR SLGAAIIYNK DKAWDHHWIF WVGPFAGAAI AAFYHQFVLR AGAIKALGSF RSQPHV
Arabidopsis Description
PIP2-5Probable aquaporin PIP2-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SV31]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.