Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- endoplasmic reticulum 4
- extracellular 2
- golgi 2
- plasma membrane 3
- vacuole 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G433300.1 | Wheat | endoplasmic reticulum | 92.75 | 97.98 |
| TraesCS2A01G414200.1 | Wheat | plastid | 96.18 | 96.18 |
| Os04t0550800-01 | Rice | endoplasmic reticulum, plasma membrane | 80.92 | 78.81 |
| OQU82093 | Sorghum | plasma membrane | 77.48 | 76.03 |
| Zm00001d026178_P002 | Maize | plastid | 70.61 | 69.29 |
| GSMUA_Achr4P24600_001 | Banana | golgi, plasma membrane, plastid | 67.94 | 67.68 |
| HORVU2Hr1G097780.15 | Barley | golgi, mitochondrion, plastid | 66.41 | 64.68 |
| VIT_16s0022g00330.t01 | Wine grape | cytosol, extracellular, plasma membrane, plastid | 56.11 | 59.04 |
| PGSC0003DMT400038394 | Potato | plastid | 55.34 | 57.77 |
| Solyc03g093230.2.1 | Tomato | plastid | 54.96 | 57.37 |
| KRH39857 | Soybean | plastid | 48.47 | 50.4 |
| AT3G47440.1 | Thale cress | mitochondrion, plastid | 48.09 | 49.22 |
| Bra018148.1-P | Field mustard | extracellular, plasma membrane, plastid | 46.95 | 48.24 |
| KRH23943 | Soybean | plasma membrane | 33.21 | 47.54 |
| CDX99048 | Canola | mitochondrion, plastid | 46.56 | 47.29 |
| CDY47413 | Canola | mitochondrion, plastid | 46.56 | 47.29 |
| TraesCS6D01G232100.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 44.27 | 46.59 |
| TraesCS2D01G411400.1 | Wheat | plasma membrane | 42.75 | 45.16 |
| VIT_15s0021g02420.t01 | Wine grape | extracellular | 41.98 | 43.82 |
| TraesCS3D01G540900.1 | Wheat | plasma membrane | 40.08 | 41.67 |
| TraesCS3D01G163400.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 38.55 | 41.06 |
| TraesCS7D01G339600.1 | Wheat | plasma membrane | 41.22 | 38.71 |
| TraesCS4D01G308800.1 | Wheat | golgi, plasma membrane, vacuole | 37.02 | 37.74 |
| TraesCS1D01G175200.1 | Wheat | unclear | 36.26 | 36.12 |
| TraesCS2D01G370800.1 | Wheat | plasma membrane | 33.97 | 33.58 |
| TraesCS4D01G344300.1 | Wheat | plasma membrane | 32.06 | 32.94 |
| TraesCS6D01G227500.1 | Wheat | golgi | 31.68 | 28.62 |
| TraesCS5D01G561700.1 | Wheat | golgi, peroxisome, plasma membrane | 30.92 | 28.52 |
| TraesCS5D01G548900.1 | Wheat | golgi, peroxisome, plasma membrane | 31.3 | 28.37 |
| TraesCS2D01G206300.1 | Wheat | golgi | 31.3 | 28.28 |
| TraesCS5D01G560400.1 | Wheat | golgi, peroxisome, plasma membrane | 31.3 | 28.18 |
| TraesCS4D01G355600.1 | Wheat | golgi, peroxisome, plasma membrane | 31.3 | 28.08 |
| TraesCS6D01G212900.1 | Wheat | golgi, plasma membrane | 30.15 | 27.62 |
| TraesCS6D01G389400.1 | Wheat | plasma membrane | 30.53 | 27.4 |
| TraesCS6D01G389500.1 | Wheat | plasma membrane | 30.53 | 27.4 |
| TraesCS5D01G185400.1 | Wheat | plasma membrane | 30.15 | 27.05 |
| TraesCS5D01G112500.1 | Wheat | plasma membrane | 29.39 | 26.92 |
| TraesCS2D01G376100.1 | Wheat | plasma membrane | 29.77 | 26.9 |
| TraesCS2D01G376000.1 | Wheat | golgi | 29.77 | 26.9 |
| TraesCS2D01G063900.1 | Wheat | plasma membrane | 29.01 | 26.76 |
| TraesCS6D01G076400.1 | Wheat | golgi, peroxisome, plasma membrane | 28.63 | 25.42 |
| TraesCS5D01G338200.1 | Wheat | plasma membrane | 27.48 | 24.74 |
| TraesCS2D01G404800.2 | Wheat | golgi, peroxisome, plasma membrane | 28.24 | 23.57 |
| TraesCS7D01G192200.1 | Wheat | golgi, peroxisome, plasma membrane | 26.72 | 23.03 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.3 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0000003 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0006810 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015204 | GO:GO:0015250 |
| GO:GO:0015267 | GO:GO:0015840 | GO:GO:0016020 | GO:GO:0030154 | GO:GO:0048235 | GO:GO:0055085 |
| GO:GO:0090406 | InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 |
| ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF54 | SUPFAM:SSF81338 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS2D01G411500 |
| EnsemblPlants:TraesCS2D01G411500.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2D:+:526346551..526347549
Molecular Weight (calculated)
26857.7 Da
IEP (calculated)
7.282
GRAVY (calculated)
0.731
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MASNLSMHLK HCFSPPSLRS YFAEFISTFL FVFTAVGSAI SARMLTPDVT SDASSLVATA VAQSFGLFAA VFIAADVSGG HVNPAVTFAF ALGGHIGVPT
101: AIFYWTCQLL GSTLACLVLH FLSAGQAVPT TRIAVEMTGF GASIVEGVMT FLLVYTVHVA GDPRAQGKKG LATTALGALV VGLVTGACVL AAGSLTGASM
201: NPARSFGPAV VSGDFKNQAV YWAGPMIGAA VAALVHQNLV FPSAPEPLPH ESRHGSVETV VV
101: AIFYWTCQLL GSTLACLVLH FLSAGQAVPT TRIAVEMTGF GASIVEGVMT FLLVYTVHVA GDPRAQGKKG LATTALGALV VGLVTGACVL AAGSLTGASM
201: NPARSFGPAV VSGDFKNQAV YWAGPMIGAA VAALVHQNLV FPSAPEPLPH ESRHGSVETV VV
001: MRRMIPTSFS SKFQGVLSMN ALRCYVSEFI STFFFVLAAV GSVMSSRKLM AGDVSGPFGV LIPAIANALA LSSSVYISWN VSGGHVNPAV TFAMAVAGRI
101: SVPTAMFYWT SQMIASVMAC LVLKVTVMEQ HVPIYKIAGE MTGFGASVLE GVLAFVLVYT VFTASDPRRG LPLAVGPIFI GFVAGANVLA AGPFSGGSMN
201: PACAFGSAMV YGSFKNQAVY WVGPLLGGAT AALVYDNVVV PVEDDRGSST GDAIGV
101: SVPTAMFYWT SQMIASVMAC LVLKVTVMEQ HVPIYKIAGE MTGFGASVLE GVLAFVLVYT VFTASDPRRG LPLAVGPIFI GFVAGANVLA AGPFSGGSMN
201: PACAFGSAMV YGSFKNQAVY WVGPLLGGAT AALVYDNVVV PVEDDRGSST GDAIGV
Arabidopsis Description
TIP5-1Probable aquaporin TIP5-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9STX9]
SUBAcon: [plastid,mitochondrion]
SUBAcon: [plastid,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.