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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, plasma membrane
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G346700.1
TraesCS2B01G365000.1
TraesCS2D01G345400.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G25810.1 TraesCS2A01G346700.1 AT1G27300.1 21798944
AT2G25810.1 TraesCS2B01G365000.1 AT1G27300.1 21798944
AT2G25810.1 TraesCS2D01G345400.1 AT1G27300.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G518300.1 Wheat golgi, plasma membrane, vacuole 98.43 98.05
TraesCS4B01G349500.1 Wheat plasma membrane 98.04 98.04
HORVU4Hr1G085250.2 Barley plastid 93.73 79.4
Zm00001d037779_P001 Maize cytosol, plasma membrane, vacuole 75.29 75.29
Zm00001d015518_P001 Maize endoplasmic reticulum, extracellular 30.59 73.58
Zm00001d019676_P001 Maize endoplasmic reticulum, extracellular, plastid 30.2 72.64
Zm00001d020747_P001 Maize extracellular 29.8 71.03
Os05t0231700-01 Rice golgi, mitochondrion, plasma membrane 82.35 66.88
Zm00001d010410_P001 Maize plasma membrane, plastid 77.25 63.34
EES17913 Sorghum cytosol, plastid 77.65 63.06
GSMUA_Achr10P... Banana cytosol, plasma membrane, vacuole 58.04 59.44
TraesCS3D01G163400.1 Wheat endoplasmic reticulum, extracellular, vacuole 57.25 59.35
CDY35336 Canola extracellular 31.76 56.64
PGSC0003DMT400024847 Potato extracellular, plasma membrane, vacuole 54.51 56.28
Solyc08g066840.2.1 Tomato endoplasmic reticulum, plasma membrane 53.73 55.47
CDX77009 Canola cytosol, plasma membrane, vacuole 53.73 55.02
KRH52727 Soybean cytosol 52.94 54.88
Bra034271.1-P Field mustard cytosol, plasma membrane, vacuole 53.33 54.62
AT2G25810.1 Thale cress cytosol, golgi, plasma membrane 52.94 54.22
KRH62059 Soybean cytosol, plasma membrane, vacuole 52.16 54.06
GSMUA_Achr9P06260_001 Banana cytosol, golgi, plasma membrane 53.33 53.33
GSMUA_Achr1P13800_001 Banana cytosol 49.02 49.21
TraesCS6D01G232100.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 45.49 46.59
TraesCS2D01G411400.1 Wheat plasma membrane 45.1 46.37
VIT_04s0008g03550.t01 Wine grape plasma membrane 53.33 45.18
TraesCS4D01G308800.1 Wheat golgi, plasma membrane, vacuole 43.14 42.8
TraesCS3D01G540900.1 Wheat plasma membrane 41.96 42.46
TraesCS2D01G370800.1 Wheat plasma membrane 41.18 39.62
TraesCS1D01G175200.1 Wheat unclear 39.22 38.02
TraesCS7D01G339600.1 Wheat plasma membrane 41.18 37.63
TraesCS2D01G411500.1 Wheat endoplasmic reticulum 32.94 32.06
TraesCS5D01G561700.1 Wheat golgi, peroxisome, plasma membrane 30.2 27.11
TraesCS2D01G376100.1 Wheat plasma membrane 30.2 26.55
TraesCS2D01G376000.1 Wheat golgi 29.8 26.21
TraesCS6D01G212900.1 Wheat golgi, plasma membrane 29.02 25.87
TraesCS2D01G206300.1 Wheat golgi 29.41 25.86
TraesCS5D01G560400.1 Wheat golgi, peroxisome, plasma membrane 29.41 25.77
TraesCS5D01G548900.1 Wheat golgi, peroxisome, plasma membrane 29.02 25.61
TraesCS2D01G063900.1 Wheat plasma membrane 28.24 25.35
TraesCS7D01G192200.1 Wheat golgi, peroxisome, plasma membrane 30.2 25.33
TraesCS5D01G112500.1 Wheat plasma membrane 28.24 25.17
TraesCS5D01G338200.1 Wheat plasma membrane 28.63 25.09
TraesCS4D01G355600.1 Wheat golgi, peroxisome, plasma membrane 28.63 25.0
TraesCS6D01G076400.1 Wheat golgi, peroxisome, plasma membrane 28.24 24.41
TraesCS6D01G389400.1 Wheat plasma membrane 25.88 22.6
TraesCS6D01G389500.1 Wheat plasma membrane 25.88 22.6
TraesCS5D01G185400.1 Wheat plasma membrane 25.88 22.6
TraesCS6D01G227500.1 Wheat golgi 25.49 22.41
TraesCS2D01G404800.2 Wheat golgi, peroxisome, plasma membrane 24.31 19.75
Protein Annotations
Gene3D:1.20.1080.10MapMan:24.3.1.3InterPro:Aquaporin-likeInterPro:Aquaporin_transptrGO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0015267GO:GO:0016020GO:GO:0055085
InterPro:IPR023271InterPro:MIPInterPro:MIP_CSPFAM:PF00230PRINTS:PR00783ScanProsite:PS00221
PANTHER:PTHR19139PANTHER:PTHR19139:SF143SUPFAM:SSF81338TMHMM:TMhelixEnsemblPlantsGene:TraesCS4D01G344300EnsemblPlants:TraesCS4D01G344300.1
SEG:seg:::::
Description
No Description!
Coordinates
chr4D:-:499618289..499619717
Molecular Weight (calculated)
26294.4 Da
IEP (calculated)
6.383
GRAVY (calculated)
0.799
Length
255 amino acids
Sequence
(BLAST)
001: MDTKHADSFD ERDVVVDAGC VRAVLGELVL TFLFVFTGVA AAMAAGVPEL QGAAMPMATL AGVALAQALA AGVLVTAGFH VSGGHLNPAV TVALLARGHI
101: TAFRAVLYVA AQLLASSLAC ILLRYLSGGQ ATPVPVHTLG AGIGPMQGLV MEVILTFSLL FVVYATIIDP RTTVPGYGPM LTGLIVGANT IAGGNFSGAS
201: MNPARSFGPA LATGVWTNHW VYWVGPLVGG PLAGFVYETV FMVTKTHEPL LGWDF
Best Arabidopsis Sequence Match ( AT2G25810.1 )
(BLAST)
001: MKKIELGHHS EAAKPDCIKA LIVEFITTFL FVFAGVGSAM ATDSLVGNTL VGLFAVAVAH AFVVAVMISA GHISGGHLNP AVTLGLLLGG HISVFRAFLY
101: WIDQLLASSA ACFLLSYLTG GMGTPVHTLA SGVSYTQGII WEIILTFSLL FTVYATIVDP KKGSLDGFGP LLTGFVVGAN ILAGGAFSGA SMNPARSFGP
201: ALVSGNWTDH WVYWVGPLIG GGLAGFIYEN VLIDRPHVPV ADDEQPLLN
Arabidopsis Description
TIP4-1Aquaporin TIP4-1 [Source:UniProtKB/Swiss-Prot;Acc:O82316]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.