Factsheet for AT2G25810.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:

nucleus 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, plasma membrane
Any Predictor:	cytosol, golgi, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034271.1-P	Field mustard	cytosol, plasma membrane, vacuole	93.17	93.17
CDX77009	Canola	cytosol, plasma membrane, vacuole	92.77	92.77
CDY35336	Canola	extracellular	51.0	88.81
KRH52727	Soybean	cytosol	75.5	76.42
KRH62059	Soybean	cytosol, plasma membrane, vacuole	75.5	76.42
PGSC0003DMT400024847	Potato	extracellular, plasma membrane, vacuole	75.1	75.71
Solyc08g066840.2.1	Tomato	endoplasmic reticulum, plasma membrane	74.3	74.9
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, vacuole	66.27	66.27
TraesCS3D01G163400.1	Wheat	endoplasmic reticulum, extracellular, vacuole	60.64	61.38
TraesCS3A01G434600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	57.43	60.34
EES02191	Sorghum	cytosol	60.24	59.52
Os01t0232000-00	Rice	cytosol, endoplasmic reticulum, plasma membrane	59.84	59.36
TraesCS3B01G182200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	59.84	59.36
TraesCS3B01G182400.1	Wheat	plasma membrane	56.63	56.85
TraesCS3A01G155800.1	Wheat	plasma membrane	56.63	56.85
Zm00001d039713_P001	Maize	plasma membrane	56.63	56.63
Zm00001d015518_P001	Maize	endoplasmic reticulum, extracellular	24.1	56.6
Zm00001d019676_P001	Maize	endoplasmic reticulum, extracellular, plastid	24.1	56.6
VIT_04s0008g03550.t01	Wine grape	plasma membrane	67.47	55.81
KXG31483	Sorghum	extracellular, golgi, plasma membrane	55.42	54.55
AT3G26520.1	Thale cress	plasma membrane	54.62	53.75
Zm00001d037779_P001	Maize	cytosol, plasma membrane, vacuole	55.02	53.73
AT4G17340.1	Thale cress	golgi, plasma membrane, vacuole	53.82	53.6
AT3G16240.1	Thale cress	plasma membrane	53.82	53.6
Zm00001d020747_P001	Maize	extracellular	22.89	53.27
TraesCS5A01G518300.1	Wheat	golgi, plasma membrane, vacuole	54.62	53.12
TraesCS4B01G349500.1	Wheat	plasma membrane	54.22	52.94
TraesCS4D01G344300.1	Wheat	plasma membrane	54.22	52.94
AT2G36830.1	Thale cress	golgi, plasma membrane, vacuole	53.01	52.59
Os01t0232100-01	Rice	cytosol, endoplasmic reticulum, extracellular	53.82	52.34
Zm00001d039293_P001	Maize	plastid	60.24	52.26
AT5G47450.1	Thale cress	golgi, plasma membrane	51.81	51.6
GSMUA_Achr9P06260_001	Banana	cytosol, golgi, plasma membrane	51.41	50.2
GSMUA_Achr1P13800_001	Banana	cytosol	51.0	50.0
AT4G01470.1	Thale cress	cytosol, golgi, plasma membrane	50.2	49.6
AT1G73190.1	Thale cress	plasma membrane	51.41	47.76
AT1G17810.1	Thale cress	cytosol, golgi, plasma membrane	50.6	47.19
HORVU4Hr1G085250.2	Barley	plastid	54.22	44.85
Os05t0231700-01	Rice	golgi, mitochondrion, plasma membrane	55.82	44.27
EES17913	Sorghum	cytosol, plastid	54.62	43.31
Zm00001d010410_P001	Maize	plasma membrane, plastid	53.41	42.77
AT1G52180.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	21.29	42.74
HORVU3Hr1G031620.5	Barley	nucleus, peroxisome, plastid	54.22	42.45
AT3G47440.1	Thale cress	mitochondrion, plastid	35.34	34.38
HORVU3Hr1G031680.1	Barley	vacuole	34.54	32.09
AT2G16850.1	Thale cress	plasma membrane	34.54	30.94
AT4G35100.1	Thale cress	plasma membrane	34.54	30.71
AT3G53420.1	Thale cress	plasma membrane	35.34	30.66
AT3G61430.1	Thale cress	plasma membrane	34.54	30.07
AT1G01620.1	Thale cress	golgi, peroxisome, plasma membrane	34.54	30.07
AT4G00430.1	Thale cress	golgi, peroxisome, plasma membrane	34.54	29.97
AT2G37180.1	Thale cress	plasma membrane	34.14	29.82
AT4G23400.1	Thale cress	plasma membrane	33.33	28.92
AT5G60660.1	Thale cress	plasma membrane	33.73	28.87
AT2G39010.1	Thale cress	plasma membrane	33.33	28.72
AT3G54820.1	Thale cress	plasma membrane	32.93	28.67
AT2G37170.2	Thale cress	plasma membrane	34.14	25.91
AT2G45960.3	Thale cress	golgi, peroxisome, plasma membrane	31.33	25.91

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.3	EntrezGene:817123	UniProt:A0A178VQH3	ProteinID:AAC42249.1	ProteinID:AEC07755.1
EMBL:AK226190	ArrayExpress:AT2G25810	EnsemblPlantsGene:AT2G25810	RefSeq:AT2G25810	TAIR:AT2G25810	RefSeq:AT2G25810-TAIR-G
EnsemblPlants:AT2G25810.1	TAIR:AT2G25810.1	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	Unigene:At.43822	EMBL:BT012635
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005774	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006833
GO:GO:0008150	GO:GO:0009705	GO:GO:0015250	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021
GO:GO:0034220	GO:GO:0042807	GO:GO:0055085	InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS
RefSeq:NP_180152.1	UniProt:O82316	ProteinID:OAP07425.1	PFAM:PF00230	PO:PO:0000037	PO:PO:0000258
PO:PO:0001078	PO:PO:0001081	PO:PO:0004507	PO:PO:0006036	PO:PO:0007611	PO:PO:0007616
PO:PO:0009005	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009052	PO:PO:0025022	PO:PO:0025181	PRINTS:PR00783
ScanProsite:PS00221	PANTHER:PTHR19139	PANTHER:PTHR19139:SF186	SUPFAM:SSF81338	TIGRFAMs:TIGR00861	Symbol:TIP4;1
TMHMM:TMhelix	UniParc:UPI00000A44ED	SEG:seg	:	:	:

Description

TIP4-1Aquaporin TIP4-1 [Source:UniProtKB/Swiss-Prot;Acc:O82316]

Coordinates

chr2:+:11012499..11014171

Molecular Weight (calculated)

26074.9 Da

IEP (calculated)

6.215

GRAVY (calculated)

0.739

Length

249 amino acids

Sequence
(BLAST)

001: MKKIELGHHS EAAKPDCIKA LIVEFITTFL FVFAGVGSAM ATDSLVGNTL VGLFAVAVAH AFVVAVMISA GHISGGHLNP AVTLGLLLGG HISVFRAFLY
101: WIDQLLASSA ACFLLSYLTG GMGTPVHTLA SGVSYTQGII WEIILTFSLL FTVYATIVDP KKGSLDGFGP LLTGFVVGAN ILAGGAFSGA SMNPARSFGP
201: ALVSGNWTDH WVYWVGPLIG GGLAGFIYEN VLIDRPHVPV ADDEQPLLN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.