Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032937.1-P | Field mustard | plasma membrane | 91.3 | 91.3 |
| CDY28539 | Canola | plasma membrane | 91.3 | 91.3 |
| CDY48983 | Canola | plasma membrane | 91.3 | 91.3 |
| CDY13639 | Canola | plasma membrane | 90.91 | 90.91 |
| Bra025210.1-P | Field mustard | plasma membrane | 90.51 | 90.51 |
| CDX83623 | Canola | golgi, plasma membrane, plastid | 90.51 | 90.51 |
| AT2G36830.1 | Thale cress | golgi, plasma membrane, vacuole | 84.98 | 85.66 |
| PGSC0003DMT400072432 | Potato | cytosol | 79.45 | 81.05 |
| Solyc10g083880.1.1 | Tomato | plastid | 78.66 | 80.24 |
| KRH67767 | Soybean | mitochondrion | 79.05 | 80.0 |
| VIT_08s0007g04780.t01 | Wine grape | cytosol | 78.26 | 78.88 |
| KRG96046 | Soybean | nucleus | 77.47 | 78.4 |
| Os03t0146100-01 | Rice | nucleus | 77.47 | 78.4 |
| GSMUA_Achr8P12920_001 | Banana | cytosol, plasma membrane, vacuole | 76.68 | 77.6 |
| EER92857 | Sorghum | cytosol | 76.28 | 77.2 |
| GSMUA_Achr1P01270_001 | Banana | cytosol, plasma membrane, vacuole | 75.49 | 76.4 |
| TraesCS4A01G410800.1 | Wheat | golgi, plasma membrane, vacuole | 75.49 | 76.4 |
| TraesCS4B01G310900.1 | Wheat | unclear | 75.49 | 76.4 |
| Zm00001d027652_P001 | Maize | plasma membrane | 75.1 | 76.0 |
| GSMUA_Achr11P... | Banana | cytosol, extracellular, vacuole | 74.7 | 75.6 |
| HORVU4Hr1G079230.1 | Barley | vacuole | 74.7 | 75.6 |
| GSMUA_Achr5P19470_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 73.12 | 73.71 |
| TraesCS4D01G308800.1 | Wheat | golgi, plasma membrane, vacuole | 72.33 | 71.21 |
| AT4G01470.1 | Thale cress | cytosol, golgi, plasma membrane | 69.96 | 70.24 |
| VIT_06s0061g00730.t01 | Wine grape | cytosol, plasma membrane, vacuole | 69.17 | 69.72 |
| AT4G17340.1 | Thale cress | golgi, plasma membrane, vacuole | 60.87 | 61.6 |
| AT3G16240.1 | Thale cress | plasma membrane | 60.87 | 61.6 |
| AT5G47450.1 | Thale cress | golgi, plasma membrane | 60.47 | 61.2 |
| AT2G25810.1 | Thale cress | cytosol, golgi, plasma membrane | 53.75 | 54.62 |
| AT1G73190.1 | Thale cress | plasma membrane | 57.71 | 54.48 |
| AT1G17810.1 | Thale cress | cytosol, golgi, plasma membrane | 56.52 | 53.56 |
| AT1G52180.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 23.32 | 47.58 |
| AT3G47440.1 | Thale cress | mitochondrion, plastid | 38.74 | 38.28 |
| AT2G16850.1 | Thale cress | plasma membrane | 35.57 | 32.37 |
| AT4G35100.1 | Thale cress | plasma membrane | 35.18 | 31.79 |
| AT3G54820.1 | Thale cress | plasma membrane | 35.57 | 31.47 |
| AT3G53420.1 | Thale cress | plasma membrane | 35.18 | 31.01 |
| AT5G60660.1 | Thale cress | plasma membrane | 35.57 | 30.93 |
| AT2G37180.1 | Thale cress | plasma membrane | 34.39 | 30.53 |
| AT2G39010.1 | Thale cress | plasma membrane | 34.78 | 30.45 |
| AT3G61430.1 | Thale cress | plasma membrane | 32.02 | 28.32 |
| AT4G00430.1 | Thale cress | golgi, peroxisome, plasma membrane | 32.02 | 28.22 |
| AT4G23400.1 | Thale cress | plasma membrane | 32.02 | 28.22 |
| AT1G01620.1 | Thale cress | golgi, peroxisome, plasma membrane | 31.62 | 27.97 |
| AT2G37170.2 | Thale cress | plasma membrane | 34.39 | 26.52 |
| AT2G45960.3 | Thale cress | golgi, peroxisome, plasma membrane | 29.25 | 24.58 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.3 | EntrezGene:822259 | UniProt:A0A178VMN2 | EMBL:AB493632 | ProteinID:AEE77174.1 |
| EMBL:AF004393 | EMBL:AF057137 | EMBL:AF419613 | EMBL:AF428341 | ArrayExpress:AT3G26520 | EnsemblPlantsGene:AT3G26520 |
| RefSeq:AT3G26520 | TAIR:AT3G26520 | RefSeq:AT3G26520-TAIR-G | EnsemblPlants:AT3G26520.1 | TAIR:AT3G26520.1 | EMBL:AY079114 |
| InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | Unigene:At.23902 | ProteinID:BAB01832.1 | UniProt:C0SVC9 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005783 | GO:GO:0005794 | GO:GO:0005886 | GO:GO:0005887 |
| GO:GO:0006810 | GO:GO:0006833 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009705 | GO:GO:0015250 | GO:GO:0015267 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0030104 | GO:GO:0031012 | GO:GO:0034220 | GO:GO:0042742 | GO:GO:0042807 |
| GO:GO:0043674 | GO:GO:0055085 | GO:GO:0080170 | InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS |
| RefSeq:NP_189283.1 | ProteinID:OAP06495.1 | PFAM:PF00230 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020123 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF265 | UniProt:Q41963 | SUPFAM:SSF81338 |
| Symbol:TIP2 | TMHMM:TMhelix | UniParc:UPI00000A78A8 | EMBL:Z18111 | SEG:seg | : |
Description
TIP1-2Aquaporin TIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q41963]
Coordinates
chr3:-:9722443..9723904
Molecular Weight (calculated)
25850.3 Da
IEP (calculated)
4.720
GRAVY (calculated)
0.791
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MPTRNIAIGG VQEEVYHPNA LRAALAEFIS TLIFVFAGSG SGIAFNKITD NGATTPSGLV AAALAHAFGL FVAVSVGANI SGGHVNPAVT FGVLLGGNIT
101: LLRGILYWIA QLLGSVAACF LLSFATGGEP IPAFGLSAGV GSLNALVFEI VMTFGLVYTV YATAVDPKNG SLGTIAPIAI GFIVGANILA GGAFSGASMN
201: PAVAFGPAVV SWTWTNHWVY WAGPLIGGGL AGIIYDFVFI DENAHEQLPT TDY
101: LLRGILYWIA QLLGSVAACF LLSFATGGEP IPAFGLSAGV GSLNALVFEI VMTFGLVYTV YATAVDPKNG SLGTIAPIAI GFIVGANILA GGAFSGASMN
201: PAVAFGPAVV SWTWTNHWVY WAGPLIGGGL AGIIYDFVFI DENAHEQLPT TDY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.