Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70391 | Canola | extracellular, golgi | 53.33 | 95.6 |
| CDX91341 | Canola | plasma membrane | 94.74 | 94.74 |
| Bra023102.1-P | Field mustard | plasma membrane | 93.33 | 93.99 |
| CDY46758 | Canola | plasma membrane | 93.33 | 93.99 |
| Bra005215.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 78.25 | 93.7 |
| CDX91340 | Canola | plasma membrane | 93.68 | 93.68 |
| CDX74983 | Canola | cytosol, peroxisome, plasma membrane | 64.56 | 93.4 |
| Bra023103.1-P | Field mustard | plasma membrane | 92.98 | 92.98 |
| CDY46759 | Canola | plasma membrane | 92.28 | 92.28 |
| Bra005216.1-P | Field mustard | cytosol, golgi, plasma membrane | 74.74 | 92.21 |
| AT3G53420.1 | Thale cress | plasma membrane | 91.58 | 90.94 |
| CDX74984 | Canola | cytosol, peroxisome, plasma membrane | 93.68 | 86.13 |
| AT2G37170.2 | Thale cress | plasma membrane | 96.84 | 84.15 |
| PGSC0003DMT400027154 | Potato | plasma membrane | 80.35 | 81.49 |
| Solyc10g084120.1.1 | Tomato | nucleus | 79.65 | 80.78 |
| AT5G60660.1 | Thale cress | plasma membrane | 82.46 | 80.76 |
| EER98451 | Sorghum | plasma membrane | 80.0 | 78.62 |
| Os07t0448800-01 | Rice | plasma membrane | 80.0 | 78.62 |
| TraesCS2A01G198500.1 | Wheat | plasma membrane | 80.0 | 78.62 |
| TraesCS2B01G225900.1 | Wheat | golgi | 79.65 | 78.28 |
| TraesCS2D01G206300.1 | Wheat | golgi | 79.65 | 78.28 |
| Zm00001d019563_P006 | Maize | plasma membrane | 79.65 | 78.28 |
| AT3G54820.1 | Thale cress | plasma membrane | 77.54 | 77.27 |
| Zm00001d005421_P001 | Maize | plasma membrane | 78.95 | 77.05 |
| AT2G16850.1 | Thale cress | plasma membrane | 75.09 | 76.98 |
| AT4G35100.1 | Thale cress | plasma membrane | 74.39 | 75.71 |
| AT2G39010.1 | Thale cress | plasma membrane | 76.49 | 75.43 |
| AT1G01620.1 | Thale cress | golgi, peroxisome, plasma membrane | 68.07 | 67.83 |
| AT4G00430.1 | Thale cress | golgi, peroxisome, plasma membrane | 67.72 | 67.25 |
| AT4G23400.1 | Thale cress | plasma membrane | 67.72 | 67.25 |
| AT3G61430.1 | Thale cress | plasma membrane | 67.37 | 67.13 |
| HORVU2Hr1G038740.1 | Barley | golgi, mitochondrion, plasma membrane | 80.0 | 66.86 |
| AT2G45960.3 | Thale cress | golgi, peroxisome, plasma membrane | 62.81 | 59.47 |
| AT3G16240.1 | Thale cress | plasma membrane | 33.68 | 38.4 |
| AT4G01470.1 | Thale cress | cytosol, golgi, plasma membrane | 31.93 | 36.11 |
| AT5G47450.1 | Thale cress | golgi, plasma membrane | 30.88 | 35.2 |
| AT4G17340.1 | Thale cress | golgi, plasma membrane, vacuole | 30.18 | 34.4 |
| AT3G26520.1 | Thale cress | plasma membrane | 30.53 | 34.39 |
| AT2G25810.1 | Thale cress | cytosol, golgi, plasma membrane | 29.82 | 34.14 |
| AT2G36830.1 | Thale cress | golgi, plasma membrane, vacuole | 29.82 | 33.86 |
| AT1G73190.1 | Thale cress | plasma membrane | 31.23 | 33.21 |
| AT1G17810.1 | Thale cress | cytosol, golgi, plasma membrane | 30.18 | 32.21 |
| AT3G47440.1 | Thale cress | mitochondrion, plastid | 24.21 | 26.95 |
| AT1G52180.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 11.58 | 26.61 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.2 | EntrezGene:818294 | ProteinID:AAD18141.1 | ProteinID:AEC09363.1 | ArrayExpress:AT2G37180 |
| EnsemblPlantsGene:AT2G37180 | RefSeq:AT2G37180 | TAIR:AT2G37180 | RefSeq:AT2G37180-TAIR-G | EnsemblPlants:AT2G37180.1 | TAIR:AT2G37180.1 |
| EMBL:AY064029 | EMBL:AY084875 | EMBL:AY096701 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | Unigene:At.65760 |
| EMBL:D13254 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005887 | GO:GO:0006810 | GO:GO:0006833 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0009414 | GO:GO:0009628 | GO:GO:0015250 | GO:GO:0015267 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0034220 | GO:GO:0055085 | InterPro:IPR023271 | InterPro:MIP | InterPro:MIP_CS |
| RefSeq:NP_181255.1 | UniProt:P30302 | PFAM:PF00230 | PO:PO:0000005 | PO:PO:0000293 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009025 | PO:PO:0009046 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 |
| PANTHER:PTHR19139:SF264 | Symbol:RD28 | SUPFAM:SSF81338 | TIGRFAMs:TIGR00861 | TMHMM:TMhelix | UniParc:UPI000000178C |
| SEG:seg | : | : | : | : | : |
Description
PIP2-3Aquaporin PIP2-3 [Source:UniProtKB/Swiss-Prot;Acc:P30302]
Coordinates
chr2:+:15617635..15619155
Molecular Weight (calculated)
30430.9 Da
IEP (calculated)
7.970
GRAVY (calculated)
0.501
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKDVEGPDG FQTRDYEDPP PTPFFDAEEL TKWSLYRAVI AEFVATLLFL YVTVLTVIGY KIQSDTKAGG VDCGGVGILG IAWAFGGMIF ILVYCTAGIS
101: GGHINPAVTF GLFLARKVSL IRAVLYMVAQ CLGAICGVGF VKAFQSSHYV NYGGGANFLA DGYNTGTGLA AEIIGTFVLV YTVFSATDPK RNARDSHVPV
201: LAPLPIGFAV FMVHLATIPI TGTGINPARS FGAAVIFNKS KPWDDHWIFW VGPFIGATIA AFYHQFVLRA SGSKSLGSFR SAANV
101: GGHINPAVTF GLFLARKVSL IRAVLYMVAQ CLGAICGVGF VKAFQSSHYV NYGGGANFLA DGYNTGTGLA AEIIGTFVLV YTVFSATDPK RNARDSHVPV
201: LAPLPIGFAV FMVHLATIPI TGTGINPARS FGAAVIFNKS KPWDDHWIFW VGPFIGATIA AFYHQFVLRA SGSKSLGSFR SAANV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.