CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
cytosol 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
EER89434
EER98451
EES02290
EES07484
EES11257
EES19830
OQU85985

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G37180.1	EER89434	AT1G01620.1	21798944
AT2G37180.1	EES07484	AT1G01620.1	21798944
AT2G37180.1	EES11257	AT1G01620.1	21798944
AT2G37180.1	OQU85985	AT1G01620.1	21798944
AT2G37180.1	EES02290	AT3G16310.1	21798944
AT2G37180.1	EES19830	AT3G16310.1	21798944
AT2G37180.1	EER98451	AT3G54820.1	21798944
AT2G37180.1	EER89434	AT3G61430.1	21798944
AT2G37180.1	EES07484	AT3G61430.1	21798944
AT2G37180.1	EES11257	AT3G61430.1	21798944
AT2G37180.1	OQU85985	AT3G61430.1	21798944
AT2G37180.1	EER89434	AT4G23400.1	21798944
AT2G37180.1	EES07484	AT4G23400.1	21798944
AT2G37180.1	EES11257	AT4G23400.1	21798944
AT2G37180.1	OQU85985	AT4G23400.1	21798944
AT3G53420.1	EER98451	AT3G53420.1	19258017
AT3G54820.1	EER89434	AT1G01620.1	21798944
AT3G54820.1	EES07484	AT1G01620.1	21798944
AT3G54820.1	EES11257	AT1G01620.1	21798944
AT3G54820.1	OQU85985	AT1G01620.1	21798944
AT3G54820.1	EER89434	AT3G61430.1	21798944
AT3G54820.1	EES07484	AT3G61430.1	21798944
AT3G54820.1	EES11257	AT3G61430.1	21798944
AT3G54820.1	OQU85985	AT3G61430.1	21798944
AT3G54820.1	EER89434	AT4G00430.1	21798944
AT3G54820.1	EES07484	AT4G00430.1	21798944
AT3G54820.1	EES11257	AT4G00430.1	21798944
AT3G54820.1	OQU85985	AT4G00430.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d019563_P006	Maize	plasma membrane	99.31	99.31
Zm00001d005421_P001	Maize	plasma membrane	95.86	95.21
Os07t0448800-01	Rice	plasma membrane	92.76	92.76
TraesCS2A01G198500.1	Wheat	plasma membrane	91.03	91.03
TraesCS2D01G206300.1	Wheat	golgi	90.69	90.69
TraesCS2B01G225900.1	Wheat	golgi	90.69	90.69
KRG91899	Soybean	plasma membrane	85.86	87.68
PGSC0003DMT400053882	Potato	extracellular	58.97	87.24
CDY70391	Canola	extracellular, golgi	47.24	86.16
EES05459	Sorghum	plasma membrane	85.17	85.47
VIT_06s0004g02850.t01	Wine grape	plasma membrane	82.41	85.36
PGSC0003DMT400053877	Potato	plasma membrane	82.07	85.3
VIT_13s0019g04280.t01	Wine grape	plasma membrane	82.76	84.51
KRH70183	Soybean	mitochondrion	82.76	84.21
KRH08523	Soybean	plasma membrane	82.41	83.86
KRH08522	Soybean	plasma membrane	82.41	83.86
PGSC0003DMT400027154	Potato	plasma membrane	81.03	83.63
Bra005216.1-P	Field mustard	cytosol, golgi, plasma membrane	66.55	83.55
Bra023103.1-P	Field mustard	plasma membrane	82.07	83.51
Solyc09g007770.2.1	Tomato	nucleus	74.48	83.4
Solyc10g084120.1.1	Tomato	nucleus	80.69	83.27
EES11124	Sorghum	plasma membrane	83.79	83.22
CDY46758	Canola	plasma membrane	81.03	83.04
Bra023102.1-P	Field mustard	plasma membrane	81.03	83.04
CDY46759	Canola	plasma membrane	81.38	82.81
KRH34875	Soybean	plasma membrane	84.48	82.77
KRH29919	Soybean	mitochondrion	81.38	82.52
CDX91340	Canola	plasma membrane	81.03	82.46
KRH70184	Soybean	plasma membrane	81.03	82.46
KRH25011	Soybean	mitochondrion	81.03	82.17
EER98453	Sorghum	plasma membrane	81.03	82.17
EER98454	Sorghum	plasma membrane	81.03	82.17
EER98457	Sorghum	plasma membrane	81.03	82.17
AT3G53420.1	Thale cress	plasma membrane	81.03	81.88
Bra006997.1-P	Field mustard	plasma membrane	81.03	81.88
CDX78177	Canola	plasma membrane	81.03	81.88
EER98452	Sorghum	plasma membrane	80.69	81.82
CDX91341	Canola	plasma membrane	80.34	81.75
CDY56697	Canola	plasma membrane	80.69	81.53
Bra005215.1-P	Field mustard	cytosol, peroxisome, plasma membrane	66.9	81.51
CDX74983	Canola	cytosol, peroxisome, plasma membrane	55.17	81.22
AT3G54820.1	Thale cress	plasma membrane	79.66	80.77
CDY13298	Canola	plasma membrane	79.31	80.14
CDX67611	Canola	plasma membrane	78.97	80.07
CDY07519	Canola	plasma membrane	78.97	80.07
AT2G37180.1	Thale cress	plasma membrane	78.62	80.0
VIT_08s0040g01890.t01	Wine grape	plasma membrane	78.97	79.79
KRH26410	Soybean	golgi, peroxisome, plasma membrane	78.62	79.44
KRH22889	Soybean	golgi, peroxisome, plasma membrane	78.28	79.09
Bra003196.1-P	Field mustard	plasma membrane	77.93	79.02
Bra007100.1-P	Field mustard	plasma membrane	77.93	79.02
CDX78265	Canola	plasma membrane	77.93	79.02
CDX73446	Canola	peroxisome	77.59	78.67
HORVU2Hr1G038740.1	Barley	golgi, mitochondrion, plasma membrane	90.69	77.13
PGSC0003DMT400053881	Potato	plasma membrane	81.38	76.87
KRG95980	Soybean	plasma membrane	75.52	76.84
KRH67688	Soybean	plasma membrane	75.17	76.22
CDX74984	Canola	cytosol, peroxisome, plasma membrane	81.03	75.81
Solyc09g007760.2.1	Tomato	extracellular	78.97	74.84
OQU91911	Sorghum	plasma membrane	71.38	73.4
AT2G37170.2	Thale cress	plasma membrane	81.03	71.65
EES07484	Sorghum	plasma membrane	65.86	66.09
EES11257	Sorghum	cytosol, peroxisome, plasma membrane	65.52	65.97
OQU85985	Sorghum	cytosol, peroxisome, plasma membrane	65.52	65.52
EER89434	Sorghum	peroxisome	64.48	63.18
OQU88961	Sorghum	plastid	76.21	59.09
KXG36091	Sorghum	cytosol, peroxisome, plasma membrane	53.79	47.85
EER89797	Sorghum	plasma membrane	32.41	37.9
KXG31086	Sorghum	golgi, plasma membrane, vacuole	31.72	36.95
EES12617	Sorghum	plasma membrane	31.38	36.55
EER92857	Sorghum	cytosol	30.69	35.6
EES04303	Sorghum	cytosol	31.38	35.27
EER94020	Sorghum	golgi, mitochondrion, plasma membrane	31.03	33.83
EES02191	Sorghum	cytosol	28.28	32.54
EES11105	Sorghum	mitochondrion, plasma membrane	27.59	29.85
KXG31483	Sorghum	extracellular, golgi, plasma membrane	25.52	29.25
OQU82093	Sorghum	plasma membrane	26.21	28.46
EER95659	Sorghum	mitochondrion	26.21	28.04
EES17913	Sorghum	cytosol, plastid	27.59	25.48

Protein Annotations

Gene3D:1.20.1080.10	MapMan:24.3.1.2	EntrezGene:8059750	InterPro:Aquaporin-like	InterPro:Aquaporin_transptr	UniProt:C5X548
EnsemblPlants:EER98451	ProteinID:EER98451	ProteinID:EER98451.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006833	GO:GO:0008150
GO:GO:0015250	GO:GO:0015267	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0055085
InterPro:IPR023271	InterPro:MIP	InterPro:MIP_CS	PFAM:PF00230	PRINTS:PR00783	ScanProsite:PS00221
PANTHER:PTHR19139	PANTHER:PTHR19139:SF260	EnsemblPlantsGene:SORBI_3002G124700	SUPFAM:SSF81338	unigene:Sbi.17801	TIGRFAMs:TIGR00861
TMHMM:TMhelix	UniParc:UPI0001A840F2	RefSeq:XP_002461930.1	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:16844700..16848362

Molecular Weight (calculated)

30264.6 Da

IEP (calculated)

7.965

GRAVY (calculated)

0.555

Length

290 amino acids

Sequence
(BLAST)

001: MGKDDVIESG AGGGEFAAKD YTDPPPAPLI DAAELGSWSL YRAVIAEFIA TLLFLYITVA TVIGYKHQTD ATASGADAAC GGVGVLGIAW AFGGMIFVLV
101: YCTAGISGGH INPAVTFGLF LARKVSLVRA LLYIVAQCLG AICGVGLVKA FQSAYFDRYG GGANSLASGY SRGTGLGAEI IGTFVLVYTV FSATDPKRNA
201: RDSHVPVLAP LPIGFAVFMV HLATIPVTGT GINPARSLGA AVIYNKDKPW DDHWIFWVGP FVGAAIAAFY HQYILRAGAI KALGSFRSNA

Best Arabidopsis Sequence Match ( AT2G37170.2 )
(BLAST)

001: MRALTIAIVS LYKQLSFVSS VFTNTTYPQY KTQLSYITKK VIEMAKDVEG PEGFQTRDYE DPPPTPFFDA DELTKWSLYR AVIAEFVATL LFLYITVLTV
101: IGYKIQSDTK AGGVDCGGVG ILGIAWAFGG MIFILVYCTA GISGGHINPA VTFGLFLARK VSLIRAVLYM VAQCLGAICG VGFVKAFQSS YYDRYGGGAN
201: SLADGYNTGT GLAAEIIGTF VLVYTVFSAT DPKRNARDSH VPVLAPLPIG FAVFMVHLAT IPITGTGINP ARSFGAAVIY NKSKPWDDHW IFWVGPFIGA
301: AIAAFYHQFV LRASGSKSLG SFRSAANV

Arabidopsis Description

PIP2Bplasma membrane intrinsic protein 2 [Source:TAIR;Acc:AT2G37170]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.