Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| EES05123 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G25810.1 | EES05123 | AT1G27300.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d039713_P001 | Maize | plasma membrane | 90.91 | 92.37 |
| Os01t0232100-01 | Rice | cytosol, endoplasmic reticulum, extracellular | 69.96 | 69.14 |
| TraesCS3B01G182400.1 | Wheat | plasma membrane | 67.59 | 68.95 |
| TraesCS3A01G155800.1 | Wheat | plasma membrane | 67.59 | 68.95 |
| GSMUA_Achr10P... | Banana | cytosol, plasma membrane, vacuole | 61.26 | 62.25 |
| EES02191 | Sorghum | cytosol | 58.1 | 58.33 |
| KRH62059 | Soybean | cytosol, plasma membrane, vacuole | 54.55 | 56.1 |
| KRH52727 | Soybean | cytosol | 54.55 | 56.1 |
| AT2G25810.1 | Thale cress | cytosol, golgi, plasma membrane | 54.55 | 55.42 |
| PGSC0003DMT400024847 | Potato | extracellular, plasma membrane, vacuole | 52.57 | 53.85 |
| Bra034271.1-P | Field mustard | cytosol, plasma membrane, vacuole | 52.96 | 53.82 |
| CDX77009 | Canola | cytosol, plasma membrane, vacuole | 52.96 | 53.82 |
| Solyc08g066840.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 52.17 | 53.44 |
| GSMUA_Achr1P13800_001 | Banana | cytosol | 52.96 | 52.76 |
| CDY35336 | Canola | extracellular | 29.25 | 51.75 |
| GSMUA_Achr9P06260_001 | Banana | cytosol, golgi, plasma membrane | 49.41 | 49.02 |
| EER92857 | Sorghum | cytosol | 45.06 | 45.6 |
| EES17913 | Sorghum | cytosol, plastid | 55.73 | 44.9 |
| EES12617 | Sorghum | plasma membrane | 43.48 | 44.18 |
| VIT_04s0008g03550.t01 | Wine grape | plasma membrane | 52.17 | 43.85 |
| KXG31086 | Sorghum | golgi, plasma membrane, vacuole | 43.08 | 43.78 |
| EES04303 | Sorghum | cytosol | 44.27 | 43.41 |
| EER89797 | Sorghum | plasma membrane | 39.92 | 40.73 |
| HORVU3Hr1G031680.1 | Barley | vacuole | 41.5 | 39.18 |
| EER94020 | Sorghum | golgi, mitochondrion, plasma membrane | 41.11 | 39.1 |
| EER95659 | Sorghum | mitochondrion | 39.13 | 36.53 |
| EES11105 | Sorghum | mitochondrion, plasma membrane | 37.15 | 35.07 |
| OQU82093 | Sorghum | plasma membrane | 35.57 | 33.71 |
| EER98451 | Sorghum | plasma membrane | 29.25 | 25.52 |
| EER98454 | Sorghum | plasma membrane | 28.06 | 24.83 |
| EER98457 | Sorghum | plasma membrane | 28.06 | 24.83 |
| OQU91911 | Sorghum | plasma membrane | 27.67 | 24.82 |
| EES11124 | Sorghum | plasma membrane | 28.46 | 24.66 |
| EER98453 | Sorghum | plasma membrane | 27.67 | 24.48 |
| EER98452 | Sorghum | plasma membrane | 27.67 | 24.48 |
| EES05459 | Sorghum | plasma membrane | 27.67 | 24.22 |
| EES11257 | Sorghum | cytosol, peroxisome, plasma membrane | 26.88 | 23.61 |
| EES07484 | Sorghum | plasma membrane | 26.48 | 23.18 |
| OQU85985 | Sorghum | cytosol, peroxisome, plasma membrane | 25.69 | 22.41 |
| EER89434 | Sorghum | peroxisome | 26.09 | 22.3 |
| OQU88961 | Sorghum | plastid | 26.88 | 18.18 |
| KXG36091 | Sorghum | cytosol, peroxisome, plasma membrane | 20.16 | 15.64 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.3 | UniProt:A0A1B6Q0M9 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015267 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | InterPro:IPR023271 | EnsemblPlants:KXG31483 | ProteinID:KXG31483 | ProteinID:KXG31483.1 |
| InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 |
| PANTHER:PTHR19139:SF165 | EnsemblPlantsGene:SORBI_3003G006600 | SUPFAM:SSF81338 | TMHMM:TMhelix | UniParc:UPI00081AE164 | SEG:seg |
Description
hypothetical protein
Coordinates
chr3:-:572753..574763
Molecular Weight (calculated)
25698.4 Da
IEP (calculated)
6.409
GRAVY (calculated)
0.772
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKLTLGHRG EASEPDFFRG VLGELVLTFL FVFIGVGAAM TADGGTTSGS NAGGDLTAVA LGQALVVSVI ATAGFHISGG HVNPAVTLSL AVGGHITLFR
101: SSLYIVAQMV GSSAACFLLR WLTGGLATPV HALAAGVGAV QGVVAETVFT FSLLLVIYAT ILDPRKLLPG AGPLLTGLLV GANSIAGAVL SGASMNPARS
201: FGPAVATGVW THHWVYWVGP LAGGPLAVLV YECFFMAAAP THEHDLLPQL EDP
101: SSLYIVAQMV GSSAACFLLR WLTGGLATPV HALAAGVGAV QGVVAETVFT FSLLLVIYAT ILDPRKLLPG AGPLLTGLLV GANSIAGAVL SGASMNPARS
201: FGPAVATGVW THHWVYWVGP LAGGPLAVLV YECFFMAAAP THEHDLLPQL EDP
001: MKKIELGHHS EAAKPDCIKA LIVEFITTFL FVFAGVGSAM ATDSLVGNTL VGLFAVAVAH AFVVAVMISA GHISGGHLNP AVTLGLLLGG HISVFRAFLY
101: WIDQLLASSA ACFLLSYLTG GMGTPVHTLA SGVSYTQGII WEIILTFSLL FTVYATIVDP KKGSLDGFGP LLTGFVVGAN ILAGGAFSGA SMNPARSFGP
201: ALVSGNWTDH WVYWVGPLIG GGLAGFIYEN VLIDRPHVPV ADDEQPLLN
101: WIDQLLASSA ACFLLSYLTG GMGTPVHTLA SGVSYTQGII WEIILTFSLL FTVYATIVDP KKGSLDGFGP LLTGFVVGAN ILAGGAFSGA SMNPARSFGP
201: ALVSGNWTDH WVYWVGPLIG GGLAGFIYEN VLIDRPHVPV ADDEQPLLN
Arabidopsis Description
TIP4-1Aquaporin TIP4-1 [Source:UniProtKB/Swiss-Prot;Acc:O82316]
SUBAcon: [plasma membrane,golgi,cytosol]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.