Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- plastid 1
- vacuole 3
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- plasma membrane 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G73190.1 | EER94020 | AT1G73190.1 | 23163742 |
| AT1G73190.1 | EER95659 | AT1G73190.1 | 23163742 |
| AT1G73190.1 | EES11105 | AT1G73190.1 | 23163742 |
| AT1G73190.1 | EES02290 | AT3G16310.1 | 21798944 |
| AT1G73190.1 | EES19830 | AT3G16310.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d013956_P003 | Maize | plasma membrane | 93.61 | 95.04 |
| Zm00001d032610_P003 | Maize | mitochondrion, plastid | 91.73 | 91.73 |
| Os10t0492600-01 | Rice | plastid | 87.97 | 88.64 |
| HORVU1Hr1G043890.2 | Barley | mitochondrion | 83.46 | 84.41 |
| TraesCS1A01G165400.1 | Wheat | golgi, mitochondrion, plasma membrane, plastid | 83.46 | 84.41 |
| TraesCS1D01G175200.1 | Wheat | unclear | 83.46 | 84.41 |
| TraesCS1B01G182200.1 | Wheat | golgi | 83.08 | 84.03 |
| GSMUA_Achr4P26010_001 | Banana | cytosol, golgi, plasma membrane | 74.81 | 78.35 |
| GSMUA_Achr2P10640_001 | Banana | cytosol, golgi, plasma membrane | 72.56 | 75.98 |
| VIT_16s0039g00220.t01 | Wine grape | cytosol | 65.79 | 67.57 |
| Solyc03g019820.2.1 | Tomato | cytosol, golgi, plasma membrane | 62.78 | 64.23 |
| PGSC0003DMT400039507 | Potato | cytosol, golgi, plasma membrane | 62.78 | 64.23 |
| Solyc06g072130.2.1 | Tomato | extracellular | 61.65 | 63.32 |
| PGSC0003DMT400069330 | Potato | cytosol | 61.65 | 63.32 |
| KRH34280 | Soybean | endoplasmic reticulum | 59.4 | 62.2 |
| KRH09321 | Soybean | cytosol, mitochondrion, plasma membrane | 59.02 | 61.57 |
| CDY66321 | Canola | plasma membrane | 61.28 | 61.28 |
| KRH38823 | Soybean | nucleus | 58.65 | 61.18 |
| CDX72962 | Canola | plasma membrane | 60.9 | 61.13 |
| CDX96453 | Canola | cytosol | 60.53 | 60.75 |
| CDY11123 | Canola | cytosol | 60.53 | 60.75 |
| CDX68239 | Canola | cytosol | 60.53 | 60.75 |
| Bra016014.1-P | Field mustard | cytosol | 60.53 | 60.75 |
| AT1G17810.1 | Thale cress | cytosol, golgi, plasma membrane | 60.9 | 60.67 |
| KRG92517 | Soybean | cytosol | 57.89 | 60.63 |
| CDY48045 | Canola | golgi, mitochondrion, plasma membrane | 60.53 | 60.53 |
| Bra008079.1-P | Field mustard | golgi, mitochondrion, plasma membrane | 60.53 | 60.53 |
| AT1G73190.1 | Thale cress | plasma membrane | 60.9 | 60.45 |
| Bra025947.1-P | Field mustard | cytosol, golgi, plasma membrane | 60.53 | 60.3 |
| CDY19176 | Canola | plasma membrane | 60.15 | 59.93 |
| CDY26214 | Canola | plasma membrane | 60.15 | 59.93 |
| Bra031005.1-P | Field mustard | golgi, mitochondrion, plasma membrane | 59.77 | 59.55 |
| CDY21731 | Canola | golgi, mitochondrion, plasma membrane | 59.77 | 59.55 |
| EES11105 | Sorghum | mitochondrion, plasma membrane | 59.77 | 59.33 |
| CDX81850 | Canola | golgi, mitochondrion, plasma membrane | 59.4 | 59.18 |
| EER95659 | Sorghum | mitochondrion | 59.02 | 57.93 |
| EES04303 | Sorghum | cytosol | 54.89 | 56.59 |
| EER92857 | Sorghum | cytosol | 53.01 | 56.4 |
| EES02191 | Sorghum | cytosol | 47.37 | 50.0 |
| KXG31086 | Sorghum | golgi, plasma membrane, vacuole | 45.86 | 49.0 |
| EES12617 | Sorghum | plasma membrane | 43.98 | 46.99 |
| EER89797 | Sorghum | plasma membrane | 42.86 | 45.97 |
| KXG31483 | Sorghum | extracellular, golgi, plasma membrane | 39.1 | 41.11 |
| OQU82093 | Sorghum | plasma membrane | 36.09 | 35.96 |
| EES17913 | Sorghum | cytosol, plastid | 38.72 | 32.8 |
| EER98451 | Sorghum | plasma membrane | 33.83 | 31.03 |
| OQU91911 | Sorghum | plasma membrane | 31.95 | 30.14 |
| EES11124 | Sorghum | plasma membrane | 32.71 | 29.79 |
| EER98452 | Sorghum | plasma membrane | 31.95 | 29.72 |
| EER98453 | Sorghum | plasma membrane | 31.95 | 29.72 |
| EER98454 | Sorghum | plasma membrane | 31.95 | 29.72 |
| EER98457 | Sorghum | plasma membrane | 31.95 | 29.72 |
| EES11257 | Sorghum | cytosol, peroxisome, plasma membrane | 31.2 | 28.82 |
| EES05459 | Sorghum | plasma membrane | 31.2 | 28.72 |
| EER89434 | Sorghum | peroxisome | 31.58 | 28.38 |
| EES07484 | Sorghum | plasma membrane | 30.45 | 28.03 |
| OQU85985 | Sorghum | cytosol, peroxisome, plasma membrane | 30.45 | 27.93 |
| OQU88961 | Sorghum | plastid | 30.83 | 21.93 |
| KXG36091 | Sorghum | cytosol, peroxisome, plasma membrane | 25.94 | 21.17 |
Protein Annotations
| Gene3D:1.20.1080.10 | MapMan:24.3.1.3 | EntrezGene:8067104 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr | UniProt:C5WXD0 |
| EnsemblPlants:EER94020 | ProteinID:EER94020 | ProteinID:EER94020.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005886 | GO:GO:0005887 |
| GO:GO:0006810 | GO:GO:0006833 | GO:GO:0008150 | GO:GO:0009705 | GO:GO:0015250 | GO:GO:0015267 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0034220 | GO:GO:0042807 | GO:GO:0055085 | InterPro:IPR023271 |
| InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 | PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 |
| PANTHER:PTHR19139:SF132 | EnsemblPlantsGene:SORBI_3001G208500 | SUPFAM:SSF81338 | unigene:Sbi.3513 | TIGRFAMs:TIGR00861 | TMHMM:TMhelix |
| UniParc:UPI00018C6C4B | RefSeq:XP_002467022.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:19088973..19090440
Molecular Weight (calculated)
27642.5 Da
IEP (calculated)
8.767
GRAVY (calculated)
0.530
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTGARPGRR FTVGRSEDAT HPDTIRAAIS EFIATAIFVF AAEGSVLSLG KMYYHDTAST ASGLVTVALA HALALAVAVA VAVNVSGGHV NPAVTFGALV
101: GGRISLVRAV FYWVAQLLGA VAATLLLRLA TGGARPPGFA LASGVGDWHA VLLEAAMTFG LMYAYYATVV DPKRGHVGTI APLAVGFMLG ANVLAGGPFD
201: GAGMNPARVF GPALVGWRWR HHWVYWLGPF LGAGLAGLVY EYLVIPSADA APPHSTHHQP LAPEDY
101: GGRISLVRAV FYWVAQLLGA VAATLLLRLA TGGARPPGFA LASGVGDWHA VLLEAAMTFG LMYAYYATVV DPKRGHVGTI APLAVGFMLG ANVLAGGPFD
201: GAGMNPARVF GPALVGWRWR HHWVYWLGPF LGAGLAGLVY EYLVIPSADA APPHSTHHQP LAPEDY
001: MATSARRAYG FGRADEATHP DSIRATLAEF LSTFVFVFAG EGSILALDKL YWDTAAHTGT NTPGGLVLVA LAHALALFAA VSAAINVSGG HVNPAVTFAA
101: LIGGRISVIR AIYYWVAQLI GAILACLLLR LATNGLRPVG FHVASGVSEL HGLLMEIILT FALVYVVYST AIDPKRGSIG IIAPLAIGLI VGANILVGGP
201: FDGASMNPAR AFGPALVGWR WSNHWIYWVG PFIGGALAAL IYEYMIIPSV NEPPHHSTHQ PLAPEDY
101: LIGGRISVIR AIYYWVAQLI GAILACLLLR LATNGLRPVG FHVASGVSEL HGLLMEIILT FALVYVVYST AIDPKRGSIG IIAPLAIGLI VGANILVGGP
201: FDGASMNPAR AFGPALVGWR WSNHWIYWVG PFIGGALAAL IYEYMIIPSV NEPPHHSTHQ PLAPEDY
Arabidopsis Description
TIP3-2BETA-TIP [Source:UniProtKB/TrEMBL;Acc:A0A178WI57]
SUBAcon: [plasma membrane,golgi,cytosol]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.